Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI02717 Sapria himalayana HOM05D005048 ORTHO05D012697 5.5e-139 497.7 257 100.0
Gorai.001G007100 Gossypium raimondii HOM05D005048 ORTHO05D006420 4.5e-40 169.1 153 58.2
Thecc.09G106000 Theobroma cacao HOM05D005048 ORTHO05D006420 7.6e-40 168.3 158 57.0
Gohir.A07G004800 Gossypium hirsutum HOM05D005048 ORTHO05D006420 2.9e-39 166.4 153 56.9
Gohir.D07G007400 Gossypium hirsutum HOM05D005048 ORTHO05D006420 1.9e-38 163.7 153 57.5
Potri.017G118801 Populus trichocarpa HOM05D005048 ORTHO05D006420 1.9e-38 163.7 158 55.7
Prupe.7G225700 Prunus persica HOM05D005048 ORTHO05D006420 7.1e-38 161.8 150 54.7
Duzib168G1040 Durio zibethinus HOM05D005048 ORTHO05D006420 3.5e-37 159.5 154 55.2
Ciclev10008139m.g Citrus clementina HOM05D005048 ORTHO05D006420 3.0e-36 156.4 153 54.9
MD02G1057100 Malus domestica HOM05D005048 ORTHO05D006420 3.9e-36 156.0 155 52.9
Cfa003227 Carpinus fangiana HOM05D005048 ORTHO05D006420 5.1e-36 155.6 158 53.2
Hma1.2p1_1151F.1_g261870 Hydrangea macrophylla HOM05D005048 ORTHO05D006420 6.7e-36 155.2 158 50.6
Rhsim03G0239600 Rhododendron simsii HOM05D005048 ORTHO05D006420 6.7e-36 155.2 157 52.2
Sabra17G0098100 Salix brachista HOM05D005048 ORTHO05D006420 1.5e-35 154.1 158 51.9
Eucgr.C03804 Eucalyptus grandis HOM05D005048 ORTHO05D006420 1.9e-35 153.7 150 56.0
Cc01_g04910 Coffea canephora HOM05D005048 ORTHO05D006420 4.3e-35 152.5 153 52.3
PGR102G2767 Punica granatum HOM05D005048 ORTHO05D006420 5.7e-35 152.1 156 51.9
arahy.Tifrunner.gnm1.ann1.T6QICJ Arachis hypogaea HOM05D005048 ORTHO05D006420 1.3e-34 151.0 158 50.6
arahy.Tifrunner.gnm1.ann1.TTP0Q7 Arachis hypogaea HOM05D005048 ORTHO05D006420 1.3e-34 151.0 158 50.6
CiPaw.04G161700 Carya illinoinensis HOM05D005048 ORTHO05D006420 1.3e-34 151.0 158 50.6
GSVIVG01015352001 Vitis vinifera HOM05D005048 ORTHO05D006420 2.1e-34 150.2 158 51.3
Ah.14g082380 Amaranthus hybridus HOM05D005048 ORTHO05D006420 2.8e-34 149.8 171 48.5
ClCG05G003020 Citrullus lanatus HOM05D005048 ORTHO05D006420 2.8e-34 149.8 159 50.3
Migut.D01920 Erythranthe guttata HOM05D005048 ORTHO05D006420 3.7e-34 149.4 151 52.3
CsaV3_3G010630 Cucumis sativus L. HOM05D005048 ORTHO05D006420 6.3e-34 148.7 158 50.0
vmacro06232 Vaccinium macrocarpon HOM05D005048 ORTHO05D006420 6.3e-34 148.7 157 51.6
CSS0046369 Camellia sinensis var. sinensis HOM05D005048 ORTHO05D006420 8.2e-34 148.3 153 50.3
Haze_25781 Corylus avellana HOM05D005048 ORTHO05D006420 1.1e-33 147.9 158 51.3
Lj4g0020985 Lotus japonicus HOM05D005048 ORTHO05D006420 1.1e-33 147.9 154 53.9
Atru.chr7.1383 Acer truncatum HOM05D005048 ORTHO05D006420 1.8e-33 147.1 145 53.1
Aqoxy5G01302 Aquilegia oxysepala HOM05D005048 ORTHO05D006420 2.4e-33 146.7 152 51.3
COL.COLO4_37106 Corchorus olitorius HOM05D005048 ORTHO05D006420 3.1e-33 146.4 157 52.2
EL10Ac8g18435 Beta vulgaris HOM05D005048 ORTHO05D006420 4.1e-33 146.0 158 51.3
FAN19G2567 Fragaria x ananassa HOM05D005048 ORTHO05D006420 5.3e-33 145.6 152 52.0
FAN23G2083 Fragaria x ananassa HOM05D005048 ORTHO05D006420 5.3e-33 145.6 152 51.3
Oeu026966.2 Olea europaea HOM05D005048 ORTHO05D006420 5.3e-33 145.6 151 51.7
Actinidia32670 Actinidia chinensis HOM05D005048 ORTHO05D006420 6.9e-33 145.2 155 49.0
MELO3C006282.2 Cucumis melo HOM05D005048 ORTHO05D006420 6.9e-33 145.2 159 49.7
FAN28G0981 Fragaria x ananassa HOM05D005048 ORTHO05D006420 9.0e-33 144.8 151 52.3
Glyma.05G229400 Glycine max HOM05D005048 ORTHO05D006420 9.0e-33 144.8 153 53.6
Lalb_Chr05g0223041 Lupinus albus HOM05D005048 ORTHO05D006420 9.0e-33 144.8 149 51.7
RcHm_v2.0_Chr2g0091251 Rosa chinensis HOM05D005048 ORTHO05D006420 9.0e-33 144.8 152 50.7
Nn2g11663 Nelumbo nucifera HOM05D005048 ORTHO05D006420 1.2e-32 144.4 151 49.7
FvH4_1g05550 Fragaria vesca HOM05D005048 ORTHO05D006420 1.5e-32 144.1 152 51.3
unitig_0.g799 Utricularia gibba HOM05D005048 ORTHO05D006420 1.5e-32 144.1 150 50.7
Ca_17323_v3 Cicer arietinum L. HOM05D005048 ORTHO05D006420 2.6e-32 143.3 154 50.6
Glyma.14G218300 Glycine max HOM05D005048 ORTHO05D006420 3.4e-32 142.9 153 52.9
Sopen01g044930 Solanum pennellii HOM05D005048 ORTHO05D006420 3.4e-32 142.9 153 50.3
PGSC0003DMG400018273 Solanum tuberosum HOM05D005048 ORTHO05D006420 3.4e-32 142.9 153 50.3
SGA_v2.0_scaffold58G20419 Striga asiatica HOM05D005048 ORTHO05D006420 3.4e-32 142.9 155 49.0
TAR383G0565 Trochodendron aralioides HOM05D005048 ORTHO05D006420 3.4e-32 142.9 151 52.3
Cpa.g.sc23.64 Carica papaya HOM05D005048 ORTHO05D006420 5.9e-32 142.1 154 50.6
FAN26G2936 Fragaria x ananassa HOM05D005048 ORTHO05D006420 5.9e-32 142.1 152 51.3
QL10p015858 Quercus lobata HOM05D005048 ORTHO05D006420 5.9e-32 142.1 151 52.3
Peaxi162Scf00231g00512 Petunia axillaris HOM05D005048 ORTHO05D006420 7.6e-32 141.7 153 49.7
HPP92_003926 Vanilla planifolia HOM05D005048 ORTHO05D006420 2.2e-31 140.2 156 48.1
VMungo0251G3001 Vigna mungo HOM05D005048 ORTHO05D006420 2.9e-31 139.8 154 51.3
Carub.0007s0821 Capsella rubella HOM05D005048 ORTHO05D006420 5.0e-31 139.0 151 49.7
SalBow2G2764 Salvia bowleyana HOM05D005048 ORTHO05D006420 5.0e-31 139.0 151 50.3
Hund09223 Selenicereus undatus HOM05D005048 ORTHO05D006420 5.0e-31 139.0 153 50.3
TPR.G23489 Trifolium pratense HOM05D005048 ORTHO05D006420 8.5e-31 138.3 154 48.7
AL7G19480 Arabidopsis lyrata HOM05D005048 ORTHO05D006420 1.4e-30 137.5 151 49.7
Medtr8g103060 Medicago truncatula HOM05D005048 ORTHO05D006420 1.4e-30 137.5 154 49.4
Aqoxy1G00313 Aquilegia oxysepala HOM05D005048 ORTHO05D006420 1.9e-30 137.1 152 48.7
CAN.G1379.35 Capsicum annuum HOM05D005048 ORTHO05D006420 1.9e-30 137.1 153 49.7
TWI60G0019 Tripterygium wilfordii HOM05D005048 ORTHO05D006420 3.2e-30 136.3 153 51.0
TWI81G0001 Tripterygium wilfordii HOM05D005048 ORTHO05D006420 3.2e-30 136.3 154 49.4
BcaB08g35458 Brassica carinata HOM05D005048 ORTHO05D006420 4.2e-30 136.0 155 47.7
AUR62021458 Chenopodium quinoa HOM05D005048 ORTHO05D006420 4.2e-30 136.0 153 49.0
CARHR240280 Cardamine hirsuta HOM05D005048 ORTHO05D006420 5.5e-30 135.6 151 49.7
Aa31LG2G18290 Aethionema arabicum HOM05D005048 ORTHO05D006420 6.1e-29 132.1 152 49.3
Sp7g30130 Schrenkiella parvula HOM05D005048 ORTHO05D006420 1.3e-28 131.0 152 49.3
THA.LOC104799066 Tarenaya hassleriana HOM05D005048 ORTHO05D006420 1.8e-28 130.6 151 47.7
Thhalv10013379m.g Eutrema salsugineum HOM05D005048 ORTHO05D006420 3.9e-28 129.4 153 47.7
MBI01_g38807_MAGBIO Magnolia biondii HOM05D005048 ORTHO05D006420 8.7e-28 128.3 152 46.1
Os02g0277600 Oryza sativa ssp. japonica HOM05D005048 ORTHO05D006420 1.1e-27 127.9 154 42.9
A10p08040 Brassica napus HOM05D005048 ORTHO05D006420 1.5e-27 127.5 151 45.7
PSO210G2605 Papaver somniferum HOM05D005048 ORTHO05D006420 1.9e-27 127.1 152 45.4
BcaC04g20784 Brassica carinata HOM05D005048 ORTHO05D006420 2.5e-27 126.7 151 45.7
C09p39250 Brassica napus HOM05D005048 ORTHO05D006420 2.5e-27 126.7 151 45.7
BolC9t56804H Brassica oleracea HOM05D005048 ORTHO05D006420 2.5e-27 126.7 151 45.7
BraSC35t45995Z Brassica rapa HOM05D005048 ORTHO05D006420 4.3e-27 125.9 151 45.0
CDE05G1289 Ceratophyllum demersum HOM05D005048 ORTHO05D006420 4.3e-27 125.9 158 44.3
PSO210G5559 Papaver somniferum HOM05D005048 ORTHO05D006420 8.2e-26 121.7 152 43.4
ATR0315G096 Amborella trichopoda HOM05D005048 ORTHO05D006420 1.1e-25 121.3 151 43.7
MD15G1191600 Malus domestica HOM05D005048 ORTHO05D006420 1.4e-25 120.9 141 46.8
HanXRQChr03g0061391 Helianthus annuus HOM05D005048 ORTHO05D006420 1.8e-25 120.6 150 46.7
ECA240G4205 Erigeron canadensis HOM05D005048 ORTHO05D006420 3.1e-25 119.8 154 47.4
Lsat_1_v5_gn_7_41421 Lactuca sativa HOM05D005048 ORTHO05D006420 1.5e-24 117.5 150 44.0
CBR_g50003 Chara braunii HOM05D005048 ORTHO05D006420 8.8e-20 101.7 151 38.4
SHI15893 Sapria himalayana HOM05D009826 ORTHO05D012697 6.3e-18 95.5 97 58.8
SHI30478 Sapria himalayana HOM05D009826 ORTHO05D012697 6.3e-18 95.5 97 60.8
Mapoly0125s0046 Marchantia polymorpha HOM05D005048 ORTHO05D006420 2.4e-17 93.6 156 35.3
MCO04G387 Micromonas commoda HOM05D005048 ORTHO05D006420 2.4e-17 93.6 154 36.4
AUR62010945 Chenopodium quinoa HOM05D005048 ORTHO05D006420 9.1e-17 91.7 74 60.8
SHI25328 Sapria himalayana HOM05D009826 ORTHO05D012697 3.4e-16 89.7 90 60.0
MBI01_g29840_MAGBIO Magnolia biondii HOM05D005048 ORTHO05D006420 4.5e-16 89.4 148 40.5
SHI29284 Sapria himalayana HOM05D000023 ORTHO05D000014 1.7e-15 87.4 97 59.8
FvH4_1g05561 Fragaria vesca HOM05D005048 ORTHO05D006420 1.1e-14 84.7 49 75.5
SHI30376 Sapria himalayana HOM05D000023 ORTHO05D000014 1.1e-14 84.7 63 74.6
SHI29275 Sapria himalayana HOM05D009826 ORTHO05D012697 2.5e-14 83.6 56 78.6
SMO361G0652 Selaginella moellendorffii HOM05D005048 ORTHO05D006420 5.5e-14 82.4 150 33.3
Oeu035980.2 Olea europaea HOM05D005048 ORTHO05D006420 2.1e-13 80.5 110 41.8
FvH4_1g05551 Fragaria vesca HOM05D005048 ORTHO05D006420 2.7e-13 80.1 77 49.4
Pp3c9_14820 Physcomitrium patens HOM05D005048 ORTHO05D006420 3.6e-13 79.7 152 35.5
SHI22314 Sapria himalayana HOM05D000023 ORTHO05D000014 7.9e-13 78.6 77 59.7
Nitab4.5_0004090g0040 Nicotiana tabacum HOM05D005048 ORTHO05D006420 1.0e-12 78.2 49 71.4
Cre13.g562550 Chlamydomonas reinhardtii HOM05D005048 ORTHO05D006420 1.4e-12 77.8 159 34.0
SHI03802 Sapria himalayana HOM05D000023 ORTHO05D000014 1.4e-12 77.8 56 73.2
SHI31392 Sapria himalayana HOM05D009826 ORTHO05D012697 1.4e-12 77.8 54 74.1
SHI01847 Sapria himalayana HOM05D009826 ORTHO05D012697 1.8e-12 77.4 57 77.2
SGA_v2.0_scaffold29G12330 Striga asiatica HOM05D005048 ORTHO05D019217 2.3e-12 77.0 48 68.8
SHI21239 Sapria himalayana HOM05D009826 ORTHO05D012697 3.9e-12 76.3 49 77.6
Nitab4.5_0000399g0090 Nicotiana tabacum HOM05D005048 ORTHO05D006420 6.7e-12 75.5 49 69.4
SHI12347 Sapria himalayana HOM05D009826 ORTHO05D012697 8.8e-12 75.1 56 75.0
SHI07896 Sapria himalayana HOM05D009826 ORTHO05D012697 3.3e-11 73.2 82 53.7
Zm00001eb203380 Zea mays HOM05D005048 ORTHO05D006420 5.7e-11 72.4 51 66.7
Zm00001eb203400 Zea mays HOM05D005048 ORTHO05D006420 5.7e-11 72.4 51 66.7
Oeu035977.1 Olea europaea HOM05D005048 ORTHO05D006420 2.2e-10 70.5 150 30.0
SHI12363 Sapria himalayana HOM05D009826 ORTHO05D012697 2.8e-10 70.1 48 72.9
SHI09903 Sapria himalayana HOM05D009826 ORTHO05D012697 4.8e-10 69.3 47 76.6
SHI31586 Sapria himalayana HOM05D009826 ORTHO05D012697 1.8e-09 67.4 52 71.2
SHI32653 Sapria himalayana HOM05D000023 ORTHO05D000014 3.1e-09 66.6 56 66.1
PRCOL_00004495 Prasinoderma coloniale HOM05D005048 ORTHO05D006420 4.1e-09 66.2 152 32.9
SHI00463 Sapria himalayana HOM05D009826 ORTHO05D000014 4.1e-09 66.2 56 67.9
SHI17084 Sapria himalayana HOM05D000023 ORTHO05D000014 4.1e-09 66.2 81 53.1
CDE05G1414 Ceratophyllum demersum HOM05D005048 ORTHO05D006420 7.0e-09 65.5 49 63.3
SEGI_37811 Sequoiadendron giganteum HOM05D005048 ORTHO05D012697 2.0e-08 63.9 88 37.5
SHI08230 Sapria himalayana HOM05D009826 ORTHO05D000014 3.5e-08 63.2 123 39.8
SHI01157 Sapria himalayana HOM05D009826 ORTHO05D000014 2.9e-07 60.1 69 53.6
SHI33530 Sapria himalayana HOM05D009826 ORTHO05D012697 2.9e-07 60.1 50 64.0
Haze_26375 Corylus avellana HOM05D005048 ORTHO05D006420 3.8e-07 59.7 149 30.2
SHI11529 Sapria himalayana HOM05D000023 ORTHO05D000014 4.2e-06 56.2 72 52.8
SHI26408 Sapria himalayana HOM05D000023 ORTHO05D000014 4.2e-06 56.2 69 53.6
SHI06283 Sapria himalayana HOM05D000023 ORTHO05D000014 5.5e-06 55.8 104 42.3
SHI14952 Sapria himalayana HOM05D000023 ORTHO05D000014 5.5e-06 55.8 54 57.4
SHI26702 Sapria himalayana HOM05D000023 ORTHO05D000014 5.5e-06 55.8 76 46.1
SHI37130 Sapria himalayana HOM05D009826 ORTHO05D012697 5.5e-06 55.8 55 58.2
SHI18822 Sapria himalayana HOM05D000002 ORTHO05D000001 7.2e-06 55.5 68 48.5
SHI33358 Sapria himalayana HOM05D000023 ORTHO05D000014 9.4e-06 55.1 35 80.0


User provided reference genes

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