Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI02693 Sapria himalayana HOM05D002451 ORTHO05D007901 0.0e+00 1121.7 547 100.0
Potri.018G087300 Populus trichocarpa HOM05D002451 ORTHO05D007901 5.7e-186 654.8 534 60.7
Atru.chr7.1460 Acer truncatum HOM05D002451 ORTHO05D007901 7.7e-183 644.4 532 59.8
TAR636G2911 Trochodendron aralioides HOM05D002451 ORTHO05D005601 2.9e-182 642.5 532 60.0
CiPaw.03G225500 Carya illinoinensis HOM05D002451 ORTHO05D007901 1.9e-181 639.8 531 61.4
CSS0003026 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D007901 5.5e-181 638.3 530 60.0
Duzib168G1562 Durio zibethinus HOM05D002451 ORTHO05D007901 3.6e-180 635.6 536 59.1
Lalb_Chr05g0223211 Lupinus albus HOM05D002451 ORTHO05D007901 8.0e-180 634.4 524 60.3
Gorai.009G027400 Gossypium raimondii HOM05D002451 ORTHO05D007901 1.0e-179 634.0 529 60.3
GSVIVG01015305001 Vitis vinifera HOM05D002451 ORTHO05D007901 1.2e-178 630.6 527 58.6
Actinidia32654 Actinidia chinensis HOM05D002451 ORTHO05D007901 7.5e-178 627.9 528 58.1
Psat7g017040 Pisum sativum HOM05D002451 ORTHO05D007901 1.8e-176 623.2 530 59.4
ClCG11G002150 Citrullus lanatus HOM05D002451 ORTHO05D007901 9.2e-176 620.9 538 58.7
FAN23G2627 Fragaria x ananassa HOM05D002451 ORTHO05D007901 5.9e-175 618.2 536 58.6
RcHm_v2.0_Chr2g0091831 Rosa chinensis HOM05D002451 ORTHO05D007901 1.3e-174 617.1 547 58.3
Medtr8g102540 Medicago truncatula HOM05D002451 ORTHO05D007901 6.6e-174 614.8 535 58.7
Sp4g22900 Schrenkiella parvula HOM05D002451 ORTHO05D007901 1.9e-173 613.2 530 57.4
MBI04_g20306_MAGBIO Magnolia biondii HOM05D002451 ORTHO05D007901 3.3e-173 612.5 536 57.6
FAN26G3439 Fragaria x ananassa HOM05D002451 ORTHO05D007901 4.3e-173 612.1 535 58.3
FAN28G1338 Fragaria x ananassa HOM05D002451 ORTHO05D007901 4.3e-173 612.1 535 58.1
Lj4g0024953 Lotus japonicus HOM05D002451 ORTHO05D007901 6.1e-172 608.2 530 58.9
BcaB06g29152 Brassica carinata HOM05D002451 ORTHO05D007901 1.0e-171 607.4 537 56.2
CANSAT56G2212 Cannabis sativa HOM05D002451 ORTHO05D007901 1.0e-171 607.4 526 57.2
FAN26G0432 Fragaria x ananassa HOM05D002451 ORTHO05D007901 1.8e-171 606.7 536 58.2
vmacro06250 Vaccinium macrocarpon HOM05D002451 ORTHO05D007901 1.8e-171 606.7 529 57.7
MD02G1065300 Malus domestica HOM05D002451 ORTHO05D007901 2.3e-171 606.3 541 56.7
A04p31020 Brassica napus HOM05D002451 ORTHO05D007901 3.0e-171 605.9 536 56.5
AL4G38420 Arabidopsis lyrata HOM05D002451 ORTHO05D007901 1.5e-170 603.6 525 57.5
BcaC02g07322 Brassica carinata HOM05D002451 ORTHO05D007901 2.0e-170 603.2 535 55.7
AT2G40570 Arabidopsis thaliana HOM05D002451 ORTHO05D007901 2.6e-170 602.8 533 56.5
CsaV3_2G001930 Cucumis sativus L. HOM05D002451 ORTHO05D007901 2.6e-170 602.8 534 56.9
Eucgr.C00999 Eucalyptus grandis HOM05D002451 ORTHO05D007901 2.6e-170 602.8 527 58.3
Sabra18G0075400 Salix brachista HOM05D002451 ORTHO05D007901 5.7e-170 601.7 567 54.5
Aqoxy7G01412 Aquilegia oxysepala HOM05D002451 ORTHO05D007901 1.7e-169 600.1 529 56.1
arahy.Tifrunner.gnm1.ann1.GUCG30 Arachis hypogaea HOM05D002451 ORTHO05D007901 1.7e-169 600.1 556 55.2
C04p68410 Brassica napus HOM05D002451 ORTHO05D007901 3.7e-169 599.0 537 56.1
BraA04t18559Z Brassica rapa HOM05D002451 ORTHO05D007901 3.7e-169 599.0 536 56.0
Thhalv10016464m.g Eutrema salsugineum HOM05D002451 ORTHO05D007901 8.3e-169 597.8 561 54.4
Sopen12g003400 Solanum pennellii HOM05D002451 ORTHO05D007901 1.4e-168 597.0 534 57.3
BolC4t28342H Brassica oleracea HOM05D002451 ORTHO05D007901 3.2e-168 595.9 538 55.8
Hma1.2p1_0571F.1_g180680 Hydrangea macrophylla HOM05D002451 ORTHO05D007901 5.4e-168 595.1 529 58.2
Solyc12g008450.2 Solanum lycopersicum HOM05D002451 ORTHO05D007901 7.0e-168 594.7 530 57.4
CARHR135670 Cardamine hirsuta HOM05D002451 ORTHO05D007901 3.5e-167 592.4 537 56.6
Nitab4.5_0005668g0020 Nicotiana tabacum HOM05D002451 ORTHO05D007901 3.5e-167 592.4 521 58.2
PGSC0003DMG400000298 Solanum tuberosum HOM05D002451 ORTHO05D007901 4.6e-167 592.0 528 57.6
EL10Ac8g18383 Beta vulgaris HOM05D002451 ORTHO05D007901 7.8e-167 591.3 537 56.6
Glyma.05G227000 Glycine max HOM05D002451 ORTHO05D007901 7.8e-167 591.3 549 56.3
Dinv36690 Davidia involucrata HOM05D002451 ORTHO05D007901 1.4e-163 580.5 498 58.6
Rhsim03G0237000 Rhododendron simsii HOM05D002451 ORTHO05D007901 1.8e-163 580.1 540 55.0
THA.LOC104807537 Tarenaya hassleriana HOM05D002451 ORTHO05D007901 1.8e-163 580.1 527 55.4
HPP92_009804 Vanilla planifolia HOM05D002451 ORTHO05D007901 1.8e-163 580.1 539 53.2
MSTRG.10604 Avicennia marina HOM05D002451 ORTHO05D007901 3.1e-163 579.3 526 55.9
Sc08g0008000 Simmondsia chinensis HOM05D002451 ORTHO05D007901 1.5e-162 577.0 525 56.8
Ca_17363_v3 Cicer arietinum L. HOM05D002451 ORTHO05D007901 2.0e-162 576.6 496 59.3
Cc06_g10440 Coffea canephora HOM05D002451 ORTHO05D007901 2.0e-162 576.6 540 55.0
Oeu053181.2 Olea europaea HOM05D002451 ORTHO05D007901 1.3e-161 573.9 527 55.4
TWI34G1500 Tripterygium wilfordii HOM05D002451 ORTHO05D007901 4.9e-161 572.0 487 59.1
COL.COLO4_34751 Corchorus olitorius HOM05D002451 ORTHO05D007901 1.1e-160 570.9 537 54.6
ATR0705G045 Amborella trichopoda HOM05D002451 ORTHO05D007901 1.9e-160 570.1 553 52.3
Lsat_1_v5_gn_7_39761 Lactuca sativa HOM05D002451 ORTHO05D007901 2.7e-159 566.2 522 54.6
Lj7A665T28 Lonicera japonica HOM05D002451 ORTHO05D007901 2.7e-159 566.2 642 49.2
TPR.G23434 Trifolium pratense HOM05D002451 ORTHO05D007901 2.8e-156 556.2 504 56.2
MELO3C004587.2 Cucumis melo HOM05D002451 ORTHO05D007901 1.4e-155 553.9 538 53.5
Aa31LG3G1530 Aethionema arabicum HOM05D002451 ORTHO05D007901 2.0e-154 550.1 623 45.9
Os06g0555500 Oryza sativa ssp. japonica HOM05D002451 ORTHO05D007901 8.6e-150 534.6 536 52.4
DCAR_012039 Daucus carota HOM05D002451 ORTHO05D007901 2.5e-149 533.1 482 56.8
SalBow1G8658 Salvia bowleyana HOM05D002451 ORTHO05D007901 2.1e-148 530.0 548 51.8
SalBow1G3696 Salvia bowleyana HOM05D002451 ORTHO05D007901 2.8e-148 529.6 548 51.5
PGR142G3373 Punica granatum HOM05D002451 ORTHO05D007901 1.1e-147 527.7 482 56.6
SEGI_00986 Sequoiadendron giganteum HOM05D002451 ORTHO05D007901 1.5e-146 523.9 549 49.2
PSO063G0860 Papaver somniferum HOM05D002451 ORTHO05D007901 5.8e-146 521.9 486 54.3
Ah.14g083250 Amaranthus hybridus HOM05D002451 ORTHO05D007901 9.9e-146 521.2 532 52.3
Migut.K00538 Erythranthe guttata HOM05D002451 ORTHO05D007901 4.9e-145 518.8 526 51.7
VMungo0251G0535 Vigna mungo HOM05D002451 ORTHO05D007901 1.9e-144 516.9 465 56.8
AUR62010914 Chenopodium quinoa HOM05D002451 ORTHO05D007901 4.6e-143 512.3 536 51.9
Sed0018496 Sechium edule HOM05D002451 ORTHO05D007901 1.7e-142 510.4 464 56.5
Peaxi162Scf00665g00035 Petunia axillaris HOM05D002451 ORTHO05D007901 3.9e-142 509.2 537 50.7
Hund09106 Selenicereus undatus HOM05D002451 ORTHO05D007901 1.1e-139 501.1 616 47.6
Manes.16G108300 Manihot esculenta HOM05D002451 ORTHO05D007901 4.4e-138 495.7 440 58.0
Nn8g39075 Nelumbo nucifera HOM05D002451 ORTHO05D007901 4.4e-138 495.7 450 55.1
FAN19G3003 Fragaria x ananassa HOM05D002451 ORTHO05D007901 6.6e-134 481.9 424 58.3
Ciclev10008594m.g Citrus clementina HOM05D002451 ORTHO05D007901 2.5e-133 479.9 379 61.5
Prupe.7G220200 Prunus persica HOM05D002451 ORTHO05D007901 2.5e-133 479.9 444 56.1
Cfa003184 Carpinus fangiana HOM05D002451 ORTHO05D007901 6.9e-131 471.9 421 56.5
AagrBONN_evm.TU.Sc2ySwM_117.4166 Anthoceros agrestis HOM05D002451 ORTHO05D007901 3.4e-130 469.5 525 48.0
Zm00001eb384640 Zea mays HOM05D002451 ORTHO05D007901 3.4e-130 469.5 483 50.9
Pp3c1_19270 Physcomitrium patens HOM05D002451 ORTHO05D007901 6.4e-129 465.3 575 45.2
Thecc.09G101000 Theobroma cacao HOM05D002451 ORTHO05D007901 5.4e-128 462.2 420 57.9
Mapoly0002s0306 Marchantia polymorpha HOM05D002451 ORTHO05D007901 1.8e-126 457.2 566 43.6
SpUn0061_0010 Schrenkiella parvula HOM05D002451 ORTHO05D007901 8.7e-126 454.9 374 59.4
Hma1.2p1_0571F.1_g180690 Hydrangea macrophylla HOM05D002451 ORTHO05D007901 1.5e-125 454.1 437 56.8
Gohir.A05G025800 Gossypium hirsutum HOM05D002451 ORTHO05D007901 2.5e-125 453.4 415 56.4
CAN.G1241.33 Capsicum annuum HOM05D002451 ORTHO05D007901 2.6e-122 443.4 388 57.5
SGA_v2.0_scaffold843G53664 Striga asiatica HOM05D002451 ORTHO05D007901 7.6e-122 441.8 448 51.1
SMO118G0195 Selaginella moellendorffii HOM05D002451 ORTHO05D007901 6.4e-121 438.7 529 46.3
FvH4_1g06070 Fragaria vesca HOM05D002451 ORTHO05D007901 8.4e-121 438.3 418 54.8
HanXRQChr09g0238871 Helianthus annuus HOM05D002451 ORTHO05D007901 4.2e-120 436.0 387 55.0
Phvul.002G309000 Phaseolus vulgaris HOM05D002451 ORTHO05D007901 3.1e-115 419.9 418 54.1
AUR62021412 Chenopodium quinoa HOM05D002451 ORTHO05D007901 3.2e-112 409.8 450 49.6
Carub.0004s2284 Capsella rubella HOM05D002451 ORTHO05D007901 1.3e-105 387.9 366 53.8
CAN.G1642.1 Capsicum annuum HOM05D002451 ORTHO05D007901 1.8e-102 377.5 430 48.6
CDE08G0666 Ceratophyllum demersum HOM05D002257 ORTHO05D007901 3.7e-100 369.8 386 51.0
TAR636G1745 Trochodendron aralioides HOM05D002451 ORTHO05D007901 4.6e-95 352.8 381 48.3
SGA_v2.0_scaffold19G08736 Striga asiatica HOM05D002451 ORTHO05D007901 3.9e-86 323.2 236 65.3
MD15G1196200 Malus domestica HOM05D002451 ORTHO05D007901 2.8e-84 317.0 533 37.1
Gohir.D05G027300 Gossypium hirsutum HOM05D002451 ORTHO05D007901 3.5e-74 283.5 261 55.9
CBR_g41536 Chara braunii HOM05D002451 ORTHO05D007901 1.8e-70 271.2 508 34.8
MCO03G573 Micromonas commoda HOM05D002451 ORTHO05D007901 4.2e-64 250.0 593 32.4
SGA_v2.0_scaffold4172G54434 Striga asiatica HOM05D002451 ORTHO05D007901 2.3e-54 217.6 244 45.9
QL02p041683 Quercus lobata HOM05D002451 ORTHO05D007901 8.9e-54 215.7 140 70.7
ECA240G2417 Erigeron canadensis HOM05D002451 ORTHO05D007901 9.8e-53 212.2 431 35.3
unitig_46.g18399 Utricularia gibba HOM05D002451 ORTHO05D007901 2.2e-52 211.1 282 43.3
SGA_v2.0_scaffold19G08729 Striga asiatica HOM05D002451 ORTHO05D007901 1.6e-50 204.9 124 73.4
PRCOL_00006066 Prasinoderma coloniale HOM05D000173 ORTHO05D004400 1.9e-48 198.0 331 35.3
CDE02G1621 Ceratophyllum demersum HOM05D002451 ORTHO05D007901 5.4e-43 179.9 143 59.4
Cre06.g272100 Chlamydomonas reinhardtii HOM05D002451 ORTHO05D007901 5.0e-41 173.3 127 60.6
Nn1g07675 Nelumbo nucifera HOM05D002451 ORTHO05D007901 1.1e-35 155.6 109 67.0
CAN.G4309.1 Capsicum annuum HOM05D002451 ORTHO05D007901 7.1e-35 152.9 142 55.6
Cpa.g.sc40.100 Carica papaya HOM05D002451 ORTHO05D007901 3.9e-33 147.1 93 72.0
Nitab4.5_0000566g0090 Nicotiana tabacum HOM05D002451 ORTHO05D007901 1.1e-32 145.6 90 73.3
unitig_46.g18400 Utricularia gibba HOM05D002451 ORTHO05D007901 1.6e-31 141.7 88 71.6
Cpa.g.c44357 Carica papaya HOM05D002451 ORTHO05D007901 2.3e-25 121.3 139 48.2
CBR_g41538 Chara braunii HOM05D002451 ORTHO05D007901 6.4e-20 103.2 106 49.1
Ciclev10010851m.g Citrus clementina HOM05D002451 ORTHO05D007901 1.1e-19 102.4 74 66.2
TAR636G3106 Trochodendron aralioides HOM05D002451 ORTHO05D007901 9.9e-13 79.3 69 56.5
TPR.G23499 Trifolium pratense HOM05D002451 ORTHO05D007901 1.9e-08 65.1 53 58.5


User provided reference genes

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