Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI02652 Sapria himalayana HOM05D004751 ORTHO05D005819 1.7e-72 275.8 129 100.0
Eucgr.C03719 Eucalyptus grandis HOM05D004751 ORTHO05D005819 1.5e-23 113.2 94 57.4
Dinv42256 Davidia involucrata HOM05D004751 ORTHO05D005819 4.3e-23 111.7 94 59.6
Dinv36677 Davidia involucrata HOM05D004751 ORTHO05D005819 5.6e-23 111.3 90 61.1
Lj7C667T4 Lonicera japonica HOM05D004751 ORTHO05D005819 5.6e-23 111.3 94 57.4
arahy.Tifrunner.gnm1.ann1.11NKIJ Arachis hypogaea HOM05D004751 ORTHO05D005819 7.3e-23 110.9 94 56.4
arahy.Tifrunner.gnm1.ann1.U02M06 Arachis hypogaea HOM05D004751 ORTHO05D005819 7.3e-23 110.9 94 56.4
Thecc.09G099100 Theobroma cacao HOM05D004751 ORTHO05D005819 7.3e-23 110.9 93 57.0
PSO210G2464 Papaver somniferum HOM05D004751 ORTHO05D005819 1.2e-22 110.2 93 57.0
TAR626G1784 Trochodendron aralioides HOM05D004751 ORTHO05D005819 1.2e-22 110.2 94 58.5
TAR639G0003 Trochodendron aralioides HOM05D004751 ORTHO05D005819 1.2e-22 110.2 94 58.5
Psat1g048040 Pisum sativum HOM05D004751 ORTHO05D005819 1.6e-22 109.8 94 55.3
Atru.chr7.1477 Acer truncatum HOM05D004751 ORTHO05D005819 2.1e-22 109.4 94 56.4
COL.COLO4_34728 Corchorus olitorius HOM05D004751 ORTHO05D005819 2.1e-22 109.4 93 55.9
Aqoxy7G03607 Aquilegia oxysepala HOM05D004751 ORTHO05D005819 2.8e-22 109.0 94 56.4
Ca_25582_v3 Cicer arietinum L. HOM05D004751 ORTHO05D005819 2.8e-22 109.0 93 55.9
Gorai.009G028000 Gossypium raimondii HOM05D004751 ORTHO05D005819 2.8e-22 109.0 93 55.9
Medtr6g088835 Medicago truncatula HOM05D004751 ORTHO05D005819 3.6e-22 108.6 93 54.8
Glyma.07G125200 Glycine max HOM05D004751 ORTHO05D005819 4.7e-22 108.2 94 55.3
MBI15_g07764_MAGBIO Magnolia biondii HOM05D004751 ORTHO05D005819 4.7e-22 108.2 91 59.3
PSO210G3406 Papaver somniferum HOM05D004751 ORTHO05D005819 4.7e-22 108.2 88 58.0
Ah.09g230480 Amaranthus hybridus HOM05D004751 ORTHO05D005819 6.1e-22 107.8 90 58.9
Ciclev10007242m.g Citrus clementina HOM05D004751 ORTHO05D005819 6.1e-22 107.8 106 51.9
Glyma.01G006600 Glycine max HOM05D004751 ORTHO05D005819 6.1e-22 107.8 93 55.9
Gohir.D05G027800 Gossypium hirsutum HOM05D004751 ORTHO05D005819 6.1e-22 107.8 93 54.8
ATR0730G043 Amborella trichopoda HOM05D004751 ORTHO05D005819 8.0e-22 107.5 88 60.2
CAN.G787.12 Capsicum annuum HOM05D004751 ORTHO05D005819 1.4e-21 106.7 94 55.3
Gohir.A05G026300 Gossypium hirsutum HOM05D004751 ORTHO05D005819 1.4e-21 106.7 93 54.8
Hund26286 Selenicereus undatus HOM05D004751 ORTHO05D005819 1.4e-21 106.7 90 57.8
QL02p040907 Quercus lobata HOM05D004751 ORTHO05D005819 1.8e-21 106.3 94 55.3
PGSC0003DMG400023589 Solanum tuberosum HOM05D004751 ORTHO05D005819 1.8e-21 106.3 94 55.3
Peaxi162Scf01157g00011 Petunia axillaris HOM05D004751 ORTHO05D005819 2.3e-21 105.9 94 54.3
HanXRQChr03g0061061 Helianthus annuus HOM05D004751 ORTHO05D005819 3.0e-21 105.5 94 54.3
TPR.G31000 Trifolium pratense HOM05D004751 ORTHO05D005819 3.0e-21 105.5 93 54.8
Cpa.g.sc78.25 Carica papaya HOM05D004751 ORTHO05D005819 5.2e-21 104.8 94 53.2
Cc06_g10590 Coffea canephora HOM05D004751 ORTHO05D005819 5.2e-21 104.8 94 58.5
Nitab4.5_0015727g0010 Nicotiana tabacum HOM05D004751 ORTHO05D005819 5.2e-21 104.8 94 54.3
Sed0000923 Sechium edule HOM05D004751 ORTHO05D005819 5.2e-21 104.8 95 52.6
Sc08g0008060 Simmondsia chinensis HOM05D004751 ORTHO05D005819 5.2e-21 104.8 88 60.2
Solyc04g012170.4 Solanum lycopersicum HOM05D004751 ORTHO05D005819 5.2e-21 104.8 94 54.3
Sopen04g006260 Solanum pennellii HOM05D004751 ORTHO05D005819 5.2e-21 104.8 94 54.3
ClCG03G016070 Citrullus lanatus HOM05D004751 ORTHO05D005819 6.8e-21 104.4 94 53.2
Lalb_Chr14g0371941 Lupinus albus HOM05D004751 ORTHO05D005819 6.8e-21 104.4 94 53.2
Nitab4.5_0001242g0100 Nicotiana tabacum HOM05D004751 ORTHO05D005819 6.8e-21 104.4 94 54.3
Prupe.2G065200 Prunus persica HOM05D004751 ORTHO05D005819 6.8e-21 104.4 93 54.8
PGR102G2506 Punica granatum HOM05D004751 ORTHO05D005819 6.8e-21 104.4 79 62.0
SGA_v2.0_scaffold19G08722 Striga asiatica HOM05D004751 ORTHO05D005819 6.8e-21 104.4 92 56.5
EL10Ac8g18369 Beta vulgaris HOM05D004751 ORTHO05D005819 8.9e-21 104.0 90 56.7
Duzib150G1241 Durio zibethinus HOM05D004751 ORTHO05D005819 8.9e-21 104.0 93 54.8
Lj2g0020264 Lotus japonicus HOM05D004751 ORTHO05D005819 8.9e-21 104.0 94 54.3
MD02G1262100 Malus domestica HOM05D004751 ORTHO05D005819 8.9e-21 104.0 93 54.8
Oeu021455.1 Olea europaea HOM05D004751 ORTHO05D005819 1.2e-20 103.6 93 55.9
VMungo0464G0426 Vigna mungo HOM05D004751 ORTHO05D005819 1.2e-20 103.6 94 53.2
Potri.006G153100 Populus trichocarpa HOM05D004751 ORTHO05D005819 1.5e-20 103.2 78 65.4
AUR62021393 Chenopodium quinoa HOM05D004751 ORTHO05D005819 2.0e-20 102.8 76 65.8
RcHm_v2.0_Chr1g0331571 Rosa chinensis HOM05D004751 ORTHO05D005819 2.0e-20 102.8 93 52.7
BcaC09g51723 Brassica carinata HOM05D004751 ORTHO05D005819 2.6e-20 102.4 105 49.5
AUR62010880 Chenopodium quinoa HOM05D004751 ORTHO05D005819 2.6e-20 102.4 76 64.5
DCAR_028653 Daucus carota HOM05D004751 ORTHO05D005819 2.6e-20 102.4 83 57.8
Manes.16G108000 Manihot esculenta HOM05D004751 ORTHO05D005819 2.6e-20 102.4 78 62.8
GSVIVG01015287001 Vitis vinifera HOM05D004751 ORTHO05D005819 2.6e-20 102.4 94 55.3
CSS0000434 Camellia sinensis var. sinensis HOM05D004751 ORTHO05D005819 3.4e-20 102.1 83 60.2
CSS0026223 Camellia sinensis var. sinensis HOM05D004751 ORTHO05D005819 3.4e-20 102.1 83 60.2
Phvul.004G175100 Phaseolus vulgaris HOM05D004751 ORTHO05D005819 3.4e-20 102.1 94 52.1
A01p08650 Brassica napus HOM05D004751 ORTHO05D005819 4.4e-20 101.7 88 59.1
C01p10120 Brassica napus HOM05D004751 ORTHO05D005819 4.4e-20 101.7 88 59.1
BolC1t00970H Brassica oleracea HOM05D004751 ORTHO05D005819 4.4e-20 101.7 88 59.1
BraA01t00815Z Brassica rapa HOM05D004751 ORTHO05D005819 4.4e-20 101.7 88 59.1
ECA240G2374 Erigeron canadensis HOM05D004751 ORTHO05D005819 4.4e-20 101.7 81 60.5
FvH4_7g05110 Fragaria vesca HOM05D004751 ORTHO05D005819 4.4e-20 101.7 93 52.7
FAN01G0060 Fragaria x ananassa HOM05D004751 ORTHO05D005819 4.4e-20 101.7 93 52.7
FAN06G4551 Fragaria x ananassa HOM05D004751 ORTHO05D005819 4.4e-20 101.7 93 52.7
vmacro10847 Vaccinium macrocarpon HOM05D004751 ORTHO05D005819 4.4e-20 101.7 83 61.4
arahy.Tifrunner.gnm1.ann1.YRLX64 Arachis hypogaea HOM05D004751 ORTHO05D005819 5.7e-20 101.3 94 54.3
Actinidia17515 Actinidia chinensis HOM05D004751 ORTHO05D005819 1.3e-19 100.1 83 60.2
arahy.Tifrunner.gnm1.ann1.9BR2YY Arachis hypogaea HOM05D004751 ORTHO05D005819 1.3e-19 100.1 93 54.8
CiPaw.03G223300 Carya illinoinensis HOM05D004751 ORTHO05D005819 1.3e-19 100.1 94 53.2
MELO3C015420.2 Cucumis melo HOM05D004751 ORTHO05D005819 1.3e-19 100.1 94 50.0
CsaV3_1G039890 Cucumis sativus L. HOM05D004751 ORTHO05D005819 1.3e-19 100.1 94 50.0
Hma1.2p1_0012F.1_g007400 Hydrangea macrophylla HOM05D004751 ORTHO05D005819 1.3e-19 100.1 94 55.3
SalBow1G2004 Salvia bowleyana HOM05D004751 ORTHO05D005819 1.3e-19 100.1 92 55.4
TWI32G0016 Tripterygium wilfordii HOM05D004751 ORTHO05D005819 1.3e-19 100.1 94 51.1
TAR383G0360 Trochodendron aralioides HOM05D004751 ORTHO05D005819 1.7e-19 99.8 94 54.3
CANSAT56G3494 Cannabis sativa HOM05D004751 ORTHO05D005819 2.9e-19 99.0 88 54.5
Lsat_1_v5_gn_7_39580 Lactuca sativa HOM05D004751 ORTHO05D005819 2.9e-19 99.0 98 53.1
Sabra06G0121300 Salix brachista HOM05D004751 ORTHO05D005819 2.9e-19 99.0 78 62.8
MD07G1058300 Malus domestica HOM05D004751 ORTHO05D005819 3.7e-19 98.6 93 51.6
Sp7g27250 Schrenkiella parvula HOM05D004751 ORTHO05D005819 3.7e-19 98.6 88 58.0
Rhsim05G0038900 Rhododendron simsii HOM05D004751 ORTHO05D005819 4.9e-19 98.2 83 59.0
Thhalv10024212m.g Eutrema salsugineum HOM05D004751 ORTHO05D005819 8.3e-19 97.4 105 47.6
MSTRG.26388 Avicennia marina HOM05D004751 ORTHO05D005819 1.1e-18 97.1 93 52.7
TWI34G0109 Tripterygium wilfordii HOM05D004751 ORTHO05D005819 1.1e-18 97.1 94 50.0
THA.LOC104814595 Tarenaya hassleriana HOM05D004751 ORTHO05D005819 1.4e-18 96.7 69 66.7
AL7G23020 Arabidopsis lyrata HOM05D004751 ORTHO05D005819 1.8e-18 96.3 92 51.1
AT4G29380 Arabidopsis thaliana HOM05D004751 ORTHO05D005819 1.8e-18 96.3 92 52.2
Carub.0007s1117 Capsella rubella HOM05D004751 ORTHO05D005819 2.4e-18 95.9 105 46.7
Cfa003165 Carpinus fangiana HOM05D004751 ORTHO05D005819 3.2e-18 95.5 94 52.1
Haze_25834 Corylus avellana HOM05D004751 ORTHO05D005819 3.2e-18 95.5 94 52.1
Hund09091 Selenicereus undatus HOM05D004751 ORTHO05D005819 5.4e-18 94.7 73 64.4
Lsat_1_v5_gn_0_39700 Lactuca sativa HOM05D004751 ORTHO05D005819 1.2e-17 93.6 86 57.0
Migut.K00548 Erythranthe guttata HOM05D004751 ORTHO05D005819 1.6e-17 93.2 81 56.8
CDE04G1922 Ceratophyllum demersum HOM05D004751 ORTHO05D005819 2.7e-17 92.4 88 53.4
Aa31LG2G21070 Aethionema arabicum HOM05D004751 ORTHO05D005819 3.5e-17 92.0 93 51.6
Ca_25581_v3 Cicer arietinum L. HOM05D004751 ORTHO05D005819 1.5e-15 86.7 97 48.5
SEGI_30648 Sequoiadendron giganteum HOM05D004751 ORTHO05D005819 1.5e-15 86.7 70 62.9
Oeu018580.2 Olea europaea HOM05D004751 ORTHO05D005819 3.3e-15 85.5 81 53.1
Os02g0796700 Oryza sativa ssp. japonica HOM05D004751 ORTHO05D005819 7.3e-15 84.3 81 53.1
unitig_8.g4485 Utricularia gibba HOM05D004751 ORTHO05D005819 8.0e-14 80.9 69 59.4
Zm00001eb257890 Zea mays HOM05D004751 ORTHO05D005819 1.8e-13 79.7 77 54.5
RcHm_v2.0_Chr1g0332481 Rosa chinensis HOM05D004751 ORTHO05D005819 2.6e-12 75.9 72 54.2
Pp3c15_10000 Physcomitrium patens HOM05D004751 ORTHO05D005819 6.4e-11 71.2 86 44.2
AagrBONN_evm.TU.Sc2ySwM_228.4976 Anthoceros agrestis HOM05D004751 ORTHO05D005819 1.4e-10 70.1 64 48.4
Pp3c9_3860 Physcomitrium patens HOM05D004751 ORTHO05D005819 2.4e-10 69.3 86 45.3
SMO347G0104 Selaginella moellendorffii HOM05D004751 ORTHO05D005819 5.4e-10 68.2 107 31.8
Mapoly0002s0158 Marchantia polymorpha HOM05D004751 ORTHO05D005819 1.1e-07 60.5 95 37.9


User provided reference genes

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