Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI02610 Sapria himalayana HOM05D000732 ORTHO05D007766 2.3e-179 632.1 316 100.0
Manes.16G064600 Manihot esculenta HOM05D000732 ORTHO05D007766 2.0e-34 150.6 145 64.1
VMungo1215G0150 Vigna mungo HOM05D000732 ORTHO05D007766 2.5e-32 143.7 161 54.7
Duzib168G0694 Durio zibethinus HOM05D000732 ORTHO05D007766 3.2e-32 143.3 145 59.3
Phvul.003G176500 Phaseolus vulgaris HOM05D000732 ORTHO05D007766 9.4e-32 141.7 162 53.1
Thecc.09G115300 Theobroma cacao HOM05D000732 ORTHO05D007766 9.4e-32 141.7 205 46.3
Duzib150G1244 Durio zibethinus HOM05D000732 ORTHO05D007766 3.6e-31 139.8 115 68.7
Cpa.g.sc23.147 Carica papaya HOM05D000732 ORTHO05D007766 1.8e-30 137.5 151 54.3
Gohir.A05G021100 Gossypium hirsutum HOM05D000732 ORTHO05D007766 1.8e-30 137.5 112 69.6
Glyma.17G120700 Glycine max HOM05D000732 ORTHO05D007766 5.2e-30 136.0 149 55.0
Gohir.D05G022500 Gossypium hirsutum HOM05D000732 ORTHO05D007766 5.2e-30 136.0 112 68.8
Gorai.009G022800 Gossypium raimondii HOM05D000732 ORTHO05D007766 5.2e-30 136.0 112 68.8
Atru.chr7.1292 Acer truncatum HOM05D000732 ORTHO05D007766 8.8e-30 135.2 151 55.6
GSVIVG01015437001 Vitis vinifera HOM05D000732 ORTHO05D007766 2.0e-29 134.0 152 55.9
TWI63G1811 Tripterygium wilfordii HOM05D000732 ORTHO05D007766 4.4e-29 132.9 151 53.6
Glyma.05G012600 Glycine max HOM05D000732 ORTHO05D007766 9.7e-29 131.7 148 54.1
Cc06_g09290 Coffea canephora HOM05D000732 ORTHO05D007766 1.7e-28 131.0 130 61.5
PGR142G0209 Punica granatum HOM05D000732 ORTHO05D007766 1.7e-28 131.0 129 58.9
Gohir.D07G003900 Gossypium hirsutum HOM05D000732 ORTHO05D007766 3.7e-28 129.8 143 53.8
Gorai.001G003600 Gossypium raimondii HOM05D000732 ORTHO05D007766 3.7e-28 129.8 143 53.8
Ca_02543_v3 Cicer arietinum L. HOM05D000732 ORTHO05D007766 8.2e-28 128.6 116 62.1
Ciclev10007618m.g Citrus clementina HOM05D000732 ORTHO05D007766 1.1e-27 128.3 138 57.2
Psat4g042960 Pisum sativum HOM05D000732 ORTHO05D007766 1.1e-27 128.3 115 65.2
ClCG06G010420 Citrullus lanatus HOM05D000732 ORTHO05D007766 1.4e-27 127.9 117 65.8
CsaV3_1G030890 Cucumis sativus L. HOM05D000732 ORTHO05D007766 1.4e-27 127.9 117 65.8
CiPaw.03G235500 Carya illinoinensis HOM05D000732 ORTHO05D007766 1.8e-27 127.5 130 60.8
MELO3C025312.2 Cucumis melo HOM05D000732 ORTHO05D007766 2.4e-27 127.1 140 57.1
Medtr4g112035 Medicago truncatula HOM05D000732 ORTHO05D007766 3.1e-27 126.7 142 56.3
Cfa003294 Carpinus fangiana HOM05D000732 ORTHO05D007766 1.2e-26 124.8 150 52.7
COL.COLO4_34937 Corchorus olitorius HOM05D000732 ORTHO05D007766 1.6e-26 124.4 145 54.5
Nitab4.5_0003537g0030 Nicotiana tabacum HOM05D000732 ORTHO05D007766 1.6e-26 124.4 206 46.1
Oeu063087.1 Olea europaea HOM05D000732 ORTHO05D007766 2.0e-26 124.0 119 64.7
MSTRG.19330 Avicennia marina HOM05D000732 ORTHO05D007766 4.5e-26 122.9 119 63.9
RcHm_v2.0_Chr2g0091101 Rosa chinensis HOM05D000732 ORTHO05D007766 4.5e-26 122.9 144 55.6
Solyc12g007020.2 Solanum lycopersicum HOM05D000732 ORTHO05D007766 5.9e-26 122.5 138 58.0
Sopen12g002990 Solanum pennellii HOM05D000732 ORTHO05D007766 5.9e-26 122.5 138 58.0
Sed0023905 Sechium edule HOM05D000732 ORTHO05D007766 7.7e-26 122.1 124 59.7
Lj7A641T80 Lonicera japonica HOM05D000732 ORTHO05D007766 1.0e-25 121.7 134 56.0
Nitab4.5_0012119g0020 Nicotiana tabacum HOM05D000732 ORTHO05D007766 1.0e-25 121.7 179 49.2
FAN28G2903 Fragaria x ananassa HOM05D000732 ORTHO05D007766 1.3e-25 121.3 142 57.0
Aa31LG9G4370 Aethionema arabicum HOM05D000732 ORTHO05D007766 1.7e-25 120.9 127 58.3
PGSC0003DMG400000381 Solanum tuberosum HOM05D000732 ORTHO05D007766 1.7e-25 120.9 138 56.5
FAN26G3024 Fragaria x ananassa HOM05D000732 ORTHO05D007766 2.9e-25 120.2 142 56.3
HanXRQChr05g0139151 Helianthus annuus HOM05D000732 ORTHO05D007766 5.0e-25 119.4 124 55.6
Haze_25677 Corylus avellana HOM05D000732 ORTHO05D007766 6.5e-25 119.0 150 50.7
FvH4_1g05440 Fragaria vesca HOM05D000732 ORTHO05D007766 1.1e-24 118.2 142 56.3
FAN19G2164 Fragaria x ananassa HOM05D000732 ORTHO05D007766 1.1e-24 118.2 142 56.3
FAN23G2640 Fragaria x ananassa HOM05D000732 ORTHO05D007766 1.5e-24 117.9 122 61.5
Aqoxy4G03286 Aquilegia oxysepala HOM05D000732 ORTHO05D007766 2.5e-24 117.1 131 56.5
Lj4g0018297 Lotus japonicus HOM05D000732 ORTHO05D007766 9.4e-24 115.2 157 49.0
vmacro20673 Vaccinium macrocarpon HOM05D000732 ORTHO05D007766 9.4e-24 115.2 128 56.2
CDE07G0191 Ceratophyllum demersum HOM05D000732 ORTHO05D007766 1.2e-23 114.8 129 55.8
Eucgr.C01078 Eucalyptus grandis HOM05D000732 ORTHO05D007766 1.6e-23 114.4 140 51.4
BcaB04g17701 Brassica carinata HOM05D000732 ORTHO05D007766 2.7e-23 113.6 125 57.6
A08p06980 Brassica napus HOM05D000732 ORTHO05D007766 3.6e-23 113.2 123 56.9
PSO339G1373 Papaver somniferum HOM05D000732 ORTHO05D007766 4.7e-23 112.8 157 51.0
CDE06G0908 Ceratophyllum demersum HOM05D000732 ORTHO05D007766 6.1e-23 112.5 126 54.0
AT4G13370 Arabidopsis thaliana HOM05D000732 ORTHO05D007766 8.0e-23 112.1 135 50.4
Dinv36601 Davidia involucrata HOM05D000732 ORTHO05D007766 8.0e-23 112.1 118 56.8
AL9U10290 Arabidopsis lyrata HOM05D000732 ORTHO05D007766 1.4e-22 111.3 125 55.2
ECA233G4892 Erigeron canadensis HOM05D000732 ORTHO05D007766 1.4e-22 111.3 117 56.4
FAN26G1785 Fragaria x ananassa HOM05D000732 ORTHO05D007766 1.4e-22 111.3 139 54.0
Potri.018G072500 Populus trichocarpa HOM05D000732 ORTHO05D007766 1.4e-22 111.3 103 65.0
BraA08t32708Z Brassica rapa HOM05D000732 ORTHO05D007766 1.8e-22 110.9 138 52.9
AUR62033406 Chenopodium quinoa HOM05D000732 ORTHO05D007766 1.8e-22 110.9 104 66.3
QL02p086159 Quercus lobata HOM05D000732 ORTHO05D007766 1.8e-22 110.9 129 53.5
Sabra18G0064100 Salix brachista HOM05D000732 ORTHO05D007766 2.3e-22 110.5 97 64.9
Sp7g10950 Schrenkiella parvula HOM05D000732 ORTHO05D007766 4.0e-22 109.8 134 52.2
Sc08g0007130 Simmondsia chinensis HOM05D000732 ORTHO05D007766 5.2e-22 109.4 127 56.7
unitig_578.g15806 Utricularia gibba HOM05D000732 ORTHO05D007766 1.2e-21 108.2 119 56.3
Carub.0007s2920 Capsella rubella HOM05D000732 ORTHO05D007766 2.0e-21 107.5 134 51.5
CARHR218940 Cardamine hirsuta HOM05D000732 ORTHO05D007766 2.0e-21 107.5 132 50.0
Peaxi162Scf00546g00222 Petunia axillaris HOM05D000732 ORTHO05D007766 2.0e-21 107.5 118 59.3
Prupe.7G226800 Prunus persica HOM05D000732 ORTHO05D007766 2.0e-21 107.5 119 57.1
Migut.J00742 Erythranthe guttata HOM05D000732 ORTHO05D007766 3.4e-21 106.7 119 58.8
SGA_v2.0_scaffold31G12816 Striga asiatica HOM05D000732 ORTHO05D007766 4.4e-21 106.3 119 55.5
Thhalv10024576m.g Eutrema salsugineum HOM05D000732 ORTHO05D007766 7.5e-21 105.5 128 53.1
SGA_v2.0_scaffold112G31681 Striga asiatica HOM05D000732 ORTHO05D007766 7.5e-21 105.5 123 58.5
Gohir.A07G003500 Gossypium hirsutum HOM05D000732 ORTHO05D007766 1.3e-20 104.8 115 55.7
C08p08240 Brassica napus HOM05D000732 ORTHO05D007766 1.7e-20 104.4 134 50.7
arahy.Tifrunner.gnm1.ann1.H7525J Arachis hypogaea HOM05D000732 ORTHO05D007766 2.2e-20 104.0 124 54.8
BcaB03g16094 Brassica carinata HOM05D000732 ORTHO05D007766 2.2e-20 104.0 135 48.9
MD02G1062500 Malus domestica HOM05D000417 ORTHO05D007766 2.2e-20 104.0 139 48.9
THA.LOC104804579 Tarenaya hassleriana HOM05D000732 ORTHO05D007766 2.2e-20 104.0 129 51.9
arahy.Tifrunner.gnm1.ann1.3B9WQN Arachis hypogaea HOM05D000732 ORTHO05D007766 2.8e-20 103.6 124 54.8
Rhsim01G0091300 Rhododendron simsii HOM05D000732 ORTHO05D007766 3.7e-20 103.2 120 55.8
BcaC07g37375 Brassica carinata HOM05D000732 ORTHO05D007766 4.8e-20 102.8 134 50.7
BcaC07g37376 Brassica carinata HOM05D000732 ORTHO05D007766 4.8e-20 102.8 134 50.7
BolC8t47676H Brassica oleracea HOM05D000732 ORTHO05D007766 4.8e-20 102.8 134 50.7
MD15G1190300 Malus domestica HOM05D000732 ORTHO05D007766 4.8e-20 102.8 133 49.6
HanXRQChr06g0179201 Helianthus annuus HOM05D000732 ORTHO05D007766 1.8e-19 100.9 118 53.4
Lsat_1_v5_gn_8_94621 Lactuca sativa HOM05D000732 ORTHO05D007766 1.8e-19 100.9 118 53.4
MBI03_g15322_MAGBIO Magnolia biondii HOM05D000732 ORTHO05D007766 2.4e-19 100.5 101 57.4
Ah.09g226940 Amaranthus hybridus HOM05D000732 ORTHO05D007766 3.1e-19 100.1 106 62.3
Actinidia09400 Actinidia chinensis HOM05D000732 ORTHO05D007766 7.0e-19 99.0 146 46.6
EL10Ac8g18547 Beta vulgaris HOM05D000732 ORTHO05D007766 7.0e-19 99.0 130 50.8
CSS0025977 Camellia sinensis var. sinensis HOM05D000732 ORTHO05D007766 9.1e-19 98.6 119 54.6
CSS0041308 Camellia sinensis var. sinensis HOM05D000732 ORTHO05D007766 9.1e-19 98.6 119 54.6
Lalb_Chr07g0178631 Lupinus albus HOM05D000732 ORTHO05D007766 9.1e-19 98.6 159 40.3
BcaC02g09430 Brassica carinata HOM05D000732 ORTHO05D007766 1.2e-18 98.2 133 49.6
BolC4t25829H Brassica oleracea HOM05D000732 ORTHO05D007766 1.2e-18 98.2 133 49.6
Actinidia20336 Actinidia chinensis HOM05D000732 ORTHO05D007766 2.0e-18 97.4 143 46.2
CSS0014403 Camellia sinensis var. sinensis HOM05D000732 ORTHO05D007766 2.0e-18 97.4 125 49.6
CSS0032766 Camellia sinensis var. sinensis HOM05D000732 ORTHO05D007766 2.0e-18 97.4 125 49.6
TAR369G0294 Trochodendron aralioides HOM05D000732 ORTHO05D007766 3.5e-18 96.7 132 51.5
C04p42540 Brassica napus HOM05D000732 ORTHO05D007766 4.5e-18 96.3 133 48.9
QL09p039118 Quercus lobata HOM05D000732 ORTHO05D007766 4.5e-18 96.3 114 52.6
CAN.G1710.7 Capsicum annuum HOM05D000732 ORTHO05D007766 1.3e-17 94.7 123 52.8
DCAR_023979 Daucus carota HOM05D000732 ORTHO05D007766 8.0e-15 85.5 154 39.0
MD17G1097200 Malus domestica HOM05D000732 ORTHO05D007766 1.0e-14 85.1 75 64.0
BraA04t16570Z Brassica rapa HOM05D000732 ORTHO05D007766 6.8e-14 82.4 84 57.1
Hund09178 Selenicereus undatus HOM05D000732 ORTHO05D007766 2.0e-13 80.9 124 46.8
A04p08730 Brassica napus HOM05D000732 ORTHO05D007766 1.3e-12 78.2 85 57.6
HPP92_015436 Vanilla planifolia HOM05D000732 ORTHO05D007766 3.7e-12 76.6 115 44.3
Os12g0120000 Oryza sativa ssp. japonica HOM05D000732 ORTHO05D007766 6.3e-12 75.9 137 44.5
RhsimUnG0237900 Rhododendron simsii HOM05D003889 ORTHO05D004407 3.1e-11 73.6 124 41.1
Zm00001eb195530 Zea mays HOM05D000732 ORTHO05D007766 3.5e-10 70.1 59 66.1
ATR1127G067 Amborella trichopoda HOM05D000732 ORTHO05D007766 4.5e-10 69.7 80 56.2
Os11g0120200 Oryza sativa ssp. japonica HOM05D000732 ORTHO05D007766 1.3e-09 68.2 64 65.6
SEGI_19269 Sequoiadendron giganteum HOM05D000732 ORTHO05D007766 1.6e-07 61.2 136 44.1
SHI12307 Sapria himalayana HOM05D000105 ORTHO05D000023 8.9e-06 55.5 35 74.3


User provided reference genes

Program Settings