Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI02587 Sapria himalayana HOM05D003442 ORTHO05D004005 7.4e-89 330.5 164 100.0
Haze_00382 Corylus avellana HOM05D003442 ORTHO05D004005 1.5e-41 173.3 131 65.6
TAR636G2465 Trochodendron aralioides HOM05D003442 ORTHO05D004005 1.5e-41 173.3 131 64.9
Rhsim09G0020400 Rhododendron simsii HOM05D003442 ORTHO05D004005 2.0e-41 172.9 136 63.2
Cfa016067 Carpinus fangiana HOM05D003442 ORTHO05D004005 3.4e-41 172.2 131 64.9
Atru.chr12.1913 Acer truncatum HOM05D003442 ORTHO05D004005 4.4e-41 171.8 131 63.4
Rhsim05G0022700 Rhododendron simsii HOM05D003442 ORTHO05D004005 4.4e-41 171.8 131 64.9
ECA233G0769 Erigeron canadensis HOM05D003442 ORTHO05D004005 7.5e-41 171.0 131 64.1
Actinidia07921 Actinidia chinensis HOM05D003442 ORTHO05D004005 1.3e-40 170.2 131 64.1
Cc09_g04230 Coffea canephora HOM05D003442 ORTHO05D004005 1.3e-40 170.2 131 64.1
Prupe.2G328400 Prunus persica HOM05D003442 ORTHO05D004005 1.3e-40 170.2 131 65.6
vmacro12087 Vaccinium macrocarpon HOM05D003442 ORTHO05D004005 1.3e-40 170.2 131 64.1
Ciclev10031531m.g Citrus clementina HOM05D003442 ORTHO05D004005 1.7e-40 169.9 131 63.4
MD07G1310400 Malus domestica HOM05D003442 ORTHO05D004005 1.7e-40 169.9 131 64.9
Oeu007683.1 Olea europaea HOM05D003442 ORTHO05D004005 1.7e-40 169.9 131 64.9
Actinidia31263 Actinidia chinensis HOM05D003442 ORTHO05D004005 2.2e-40 169.5 131 64.1
Lj4A843G12 Lonicera japonica HOM05D003442 ORTHO05D004005 2.2e-40 169.5 131 62.6
Nn7g37514 Nelumbo nucifera HOM05D003442 ORTHO05D004005 2.2e-40 169.5 131 64.9
PGR142G0137 Punica granatum HOM05D003442 ORTHO05D004005 2.2e-40 169.5 131 64.1
Sc09g0001320 Simmondsia chinensis HOM05D003442 ORTHO05D004005 2.2e-40 169.5 131 64.9
Dinv17142 Davidia involucrata HOM05D003442 ORTHO05D004005 2.9e-40 169.1 131 65.6
Manes.09G128600 Manihot esculenta HOM05D003442 ORTHO05D004005 3.7e-40 168.7 131 63.4
Lj2g0002798 Lotus japonicus HOM05D003442 ORTHO05D004005 4.9e-40 168.3 131 62.6
Potri.013G078700 Populus trichocarpa HOM05D003442 ORTHO05D004005 4.9e-40 168.3 131 63.4
FvH4_7g34170 Fragaria vesca HOM05D003442 ORTHO05D004005 6.4e-40 167.9 131 64.1
FAN01G2089 Fragaria x ananassa HOM05D003442 ORTHO05D004005 6.4e-40 167.9 131 64.1
FAN10G2135 Fragaria x ananassa HOM05D003442 ORTHO05D004005 6.4e-40 167.9 131 64.1
arahy.Tifrunner.gnm1.ann1.I4HYIQ Arachis hypogaea HOM05D003442 ORTHO05D004005 8.3e-40 167.5 131 62.6
HanXRQChr13g0401211 Helianthus annuus HOM05D003442 ORTHO05D004005 8.3e-40 167.5 131 62.6
DCAR_002085 Daucus carota HOM05D003442 ORTHO05D004005 1.1e-39 167.2 131 62.6
Gohir.A08G221656 Gossypium hirsutum HOM05D003442 ORTHO05D004005 1.1e-39 167.2 131 61.8
Gohir.D08G241000 Gossypium hirsutum HOM05D003442 ORTHO05D004005 1.1e-39 167.2 131 61.8
MSTRG.344 Avicennia marina HOM05D003442 ORTHO05D004005 1.4e-39 166.8 131 61.8
Cpa.g.sc43.106 Carica papaya HOM05D003442 ORTHO05D004005 1.4e-39 166.8 131 61.8
Gorai.004G256400 Gossypium raimondii HOM05D003442 ORTHO05D004005 1.4e-39 166.8 131 61.1
COL.COLO4_15183 Corchorus olitorius HOM05D003442 ORTHO05D004005 1.8e-39 166.4 131 61.8
Lalb_Chr09g0333641 Lupinus albus HOM05D003442 ORTHO05D004005 1.8e-39 166.4 131 63.4
MD01G1238500 Malus domestica HOM05D003442 ORTHO05D004005 1.8e-39 166.4 131 63.4
Manes.08G064200 Manihot esculenta HOM05D003442 ORTHO05D004005 2.4e-39 166.0 131 64.9
VMungo0251G1146 Vigna mungo HOM05D003442 ORTHO05D004005 2.4e-39 166.0 131 62.6
ATR0743G255 Amborella trichopoda HOM05D003442 ORTHO05D004005 3.2e-39 165.6 131 61.1
FAN03G3412 Fragaria x ananassa HOM05D003442 ORTHO05D004005 3.2e-39 165.6 131 63.4
RcHm_v2.0_Chr1g0384521 Rosa chinensis HOM05D003442 ORTHO05D004005 3.2e-39 165.6 131 62.6
Aqoxy6G03064 Aquilegia oxysepala HOM05D003442 ORTHO05D004005 4.1e-39 165.2 131 61.8
AL5G22780 Arabidopsis lyrata HOM05D003442 ORTHO05D004005 4.1e-39 165.2 131 63.4
Duzib106G0604 Durio zibethinus HOM05D003442 ORTHO05D004005 4.1e-39 165.2 131 61.1
TWI32G0704 Tripterygium wilfordii HOM05D003442 ORTHO05D004005 4.1e-39 165.2 131 61.1
Sp7g31930 Schrenkiella parvula HOM05D003442 ORTHO05D004005 5.4e-39 164.9 131 63.4
SGA_v2.0_scaffold122G33217 Striga asiatica HOM05D003442 ORTHO05D004005 5.4e-39 164.9 131 63.4
TWI60G0615 Tripterygium wilfordii HOM05D003442 ORTHO05D004005 5.4e-39 164.9 131 61.8
Aqoxy2G01953 Aquilegia oxysepala HOM05D003442 ORTHO05D004005 7.0e-39 164.5 131 61.1
Carub.0007s0621 Capsella rubella HOM05D003442 ORTHO05D004005 7.0e-39 164.5 131 62.6
Lsat_1_v5_gn_6_25940 Lactuca sativa HOM05D003442 ORTHO05D004005 7.0e-39 164.5 131 61.1
Lalb_Chr05g0227421 Lupinus albus HOM05D003442 ORTHO05D004005 7.0e-39 164.5 131 61.8
MBI07_g36707_MAGBIO Magnolia biondii HOM05D003442 ORTHO05D004005 7.0e-39 164.5 131 61.1
Peaxi162Scf01313g00235 Petunia axillaris HOM05D003442 ORTHO05D004005 7.0e-39 164.5 131 64.1
Phvul.003G250932 Phaseolus vulgaris HOM05D003442 ORTHO05D004005 7.0e-39 164.5 131 62.6
TAR365G0691 Trochodendron aralioides HOM05D003442 ORTHO05D004005 7.0e-39 164.5 131 62.6
CSS0045568 Camellia sinensis var. sinensis HOM05D003442 ORTHO05D004005 9.2e-39 164.1 131 62.6
Eucgr.H02340 Eucalyptus grandis HOM05D003442 ORTHO05D004005 9.2e-39 164.1 131 61.8
MBI07_g38305_MAGBIO Magnolia biondii HOM05D003442 ORTHO05D004005 9.2e-39 164.1 131 60.3
BcaNung03365 Brassica carinata HOM05D003442 ORTHO05D004005 1.2e-38 163.7 131 61.8
A03p62660 Brassica napus HOM05D003442 ORTHO05D004005 1.2e-38 163.7 131 61.8
C07p60210 Brassica napus HOM05D003442 ORTHO05D004005 1.2e-38 163.7 131 61.8
BolC7t46462H Brassica oleracea HOM05D003442 ORTHO05D004005 1.2e-38 163.7 131 61.8
Duzib177G0664 Durio zibethinus HOM05D003442 ORTHO05D004005 1.2e-38 163.7 131 60.3
GSVIVG01024344001 Vitis vinifera HOM05D003442 ORTHO05D004005 1.2e-38 163.7 131 61.1
AL7G17190 Arabidopsis lyrata HOM05D003442 ORTHO05D004005 1.6e-38 163.3 131 62.6
AT3G42050 Arabidopsis thaliana HOM05D003442 ORTHO05D004005 1.6e-38 163.3 131 62.6
BraA03t15336Z Brassica rapa HOM05D003442 ORTHO05D004005 1.6e-38 163.3 135 60.0
Ciclev10032936m.g Citrus clementina HOM05D003442 ORTHO05D004005 1.6e-38 163.3 131 61.1
Migut.F01837 Erythranthe guttata HOM05D003442 ORTHO05D004005 1.6e-38 163.3 131 63.4
Lj4g0025932 Lotus japonicus HOM05D003442 ORTHO05D004005 1.6e-38 163.3 131 62.6
Sed0014541 Sechium edule HOM05D003442 ORTHO05D004005 2.0e-38 162.9 131 61.8
Ca_22246_v3 Cicer arietinum L. HOM05D003442 ORTHO05D004005 2.7e-38 162.5 131 61.8
PSO017G5499 Papaver somniferum HOM05D003442 ORTHO05D004005 2.7e-38 162.5 131 61.1
PSO675G6803 Papaver somniferum HOM05D003442 ORTHO05D004005 2.7e-38 162.5 131 61.1
BcaNung03800 Brassica carinata HOM05D003442 ORTHO05D004005 3.5e-38 162.2 131 61.8
A01p04260 Brassica napus HOM05D003442 ORTHO05D004005 3.5e-38 162.2 131 61.8
C01p04650 Brassica napus HOM05D003442 ORTHO05D004005 3.5e-38 162.2 131 61.8
BolC1t00448H Brassica oleracea HOM05D003442 ORTHO05D004005 3.5e-38 162.2 131 61.8
BraA01t00415Z Brassica rapa HOM05D003442 ORTHO05D004005 3.5e-38 162.2 131 61.8
Migut.F02084 Erythranthe guttata HOM05D003442 ORTHO05D004005 3.5e-38 162.2 131 61.8
Potri.019G047800 Populus trichocarpa HOM05D003442 ORTHO05D004005 3.5e-38 162.2 131 61.1
Thecc.05G221300 Theobroma cacao HOM05D003442 ORTHO05D004005 3.5e-38 162.2 131 60.3
CARHR242660 Cardamine hirsuta HOM05D003442 ORTHO05D004005 4.6e-38 161.8 131 62.6
Gohir.D03G053800 Gossypium hirsutum HOM05D003442 ORTHO05D004005 4.6e-38 161.8 131 59.5
Gorai.003G056300 Gossypium raimondii HOM05D003442 ORTHO05D004005 4.6e-38 161.8 131 59.5
Sed0022579 Sechium edule HOM05D003442 ORTHO05D004005 4.6e-38 161.8 131 62.6
THA.LOC104819563 Tarenaya hassleriana HOM05D003442 ORTHO05D004005 4.6e-38 161.8 131 61.8
CsaV3_3G040000 Cucumis sativus L. HOM05D003442 ORTHO05D004005 6.0e-38 161.4 131 61.8
Glyma.02G059800 Glycine max HOM05D003442 ORTHO05D004005 6.0e-38 161.4 131 61.1
Gohir.A02G127200 Gossypium hirsutum HOM05D003442 ORTHO05D004005 6.0e-38 161.4 131 59.5
Medtr8g078370 Medicago truncatula HOM05D003442 ORTHO05D004005 7.8e-38 161.0 131 61.1
PGR042G1782 Punica granatum HOM05D003442 ORTHO05D004005 7.8e-38 161.0 131 61.8
ATR0794G121 Amborella trichopoda HOM05D003442 ORTHO05D004005 1.0e-37 160.6 140 57.9
BcaB03g11847 Brassica carinata HOM05D003442 ORTHO05D004005 1.0e-37 160.6 131 61.1
CiPaw.05G214600 Carya illinoinensis HOM05D003442 ORTHO05D004005 1.0e-37 160.6 131 61.1
Thhalv10025183m.g Eutrema salsugineum HOM05D003442 ORTHO05D004005 1.0e-37 160.6 131 62.6
SalBow1G1076 Salvia bowleyana HOM05D003442 ORTHO05D004005 1.0e-37 160.6 131 59.5
SalBow1G3564 Salvia bowleyana HOM05D003442 ORTHO05D004005 1.0e-37 160.6 131 59.5
Zm00001eb323620 Zea mays HOM05D003442 ORTHO05D004005 1.0e-37 160.6 131 61.1
arahy.Tifrunner.gnm1.ann1.K5ZCN3 Arachis hypogaea HOM05D003442 ORTHO05D004005 1.3e-37 160.2 131 60.3
MELO3C009742.2 Cucumis melo HOM05D003442 ORTHO05D004005 1.3e-37 160.2 131 61.8
Lj2C606G3 Lonicera japonica HOM05D003442 ORTHO05D004005 1.3e-37 160.2 131 61.1
Aa31LG2G16640 Aethionema arabicum HOM05D003442 ORTHO05D004005 1.7e-37 159.8 131 61.1
THA.LOC104804387 Tarenaya hassleriana HOM05D003442 ORTHO05D004005 1.7e-37 159.8 131 60.3
Glyma.16G142600 Glycine max HOM05D003442 ORTHO05D004005 2.3e-37 159.5 131 61.1
Psat4g090760 Pisum sativum HOM05D003442 ORTHO05D004005 3.0e-37 159.1 131 59.5
QL09p021203 Quercus lobata HOM05D003442 ORTHO05D004005 3.0e-37 159.1 131 60.3
Solyc07g005940.4 Solanum lycopersicum HOM05D003442 ORTHO05D004005 3.0e-37 159.1 131 61.8
Sopen07g002070 Solanum pennellii HOM05D003442 ORTHO05D004005 3.0e-37 159.1 131 61.8
PGSC0003DMG401011206 Solanum tuberosum HOM05D003442 ORTHO05D004005 3.0e-37 159.1 131 61.8
BcaC01g00920 Brassica carinata HOM05D003442 ORTHO05D004005 3.9e-37 158.7 131 61.1
C03p85940 Brassica napus HOM05D003442 ORTHO05D004005 3.9e-37 158.7 131 61.1
Oeu001224.1 Olea europaea HOM05D003442 ORTHO05D004005 3.9e-37 158.7 131 60.3
Peaxi162Scf00062g00013 Petunia axillaris HOM05D003442 ORTHO05D004005 3.9e-37 158.7 131 59.5
arahy.Tifrunner.gnm1.ann1.CZ7R53 Arachis hypogaea HOM05D003442 ORTHO05D004005 5.0e-37 158.3 131 59.5
CANSAT21G2378 Cannabis sativa HOM05D003442 ORTHO05D004005 5.0e-37 158.3 131 60.3
CAN.G1610.2 Capsicum annuum HOM05D003442 ORTHO05D004005 6.6e-37 157.9 131 61.1
EL10Ac4g10031 Beta vulgaris HOM05D003442 ORTHO05D004005 8.6e-37 157.5 131 57.3
A08p17030 Brassica napus HOM05D003442 ORTHO05D004005 8.6e-37 157.5 131 60.3
BraA08t33665Z Brassica rapa HOM05D003442 ORTHO05D004005 8.6e-37 157.5 131 60.3
Nitab4.5_0002329g0200 Nicotiana tabacum HOM05D003442 ORTHO05D004005 8.6e-37 157.5 131 60.3
Nitab4.5_0008310g0020 Nicotiana tabacum HOM05D003442 ORTHO05D004005 8.6e-37 157.5 131 60.3
unitig_61.g26274 Utricularia gibba HOM05D003442 ORTHO05D004005 1.9e-36 156.4 131 58.8
DCAR_023762 Daucus carota HOM05D003442 ORTHO05D004005 2.5e-36 156.0 131 59.5
SalBow3G0476 Salvia bowleyana HOM05D003442 ORTHO05D004005 2.5e-36 156.0 131 56.5
Hund07385 Selenicereus undatus HOM05D003442 ORTHO05D004005 2.5e-36 156.0 131 59.5
Sc16g0010680 Simmondsia chinensis HOM05D003442 ORTHO05D004005 2.5e-36 156.0 131 58.0
MSTRG.8187 Avicennia marina HOM05D003442 ORTHO05D004005 4.3e-36 155.2 131 58.0
AUR62000266 Chenopodium quinoa HOM05D003442 ORTHO05D004005 5.6e-36 154.8 131 58.8
Ah.04g159350 Amaranthus hybridus HOM05D003442 ORTHO05D004005 1.2e-35 153.7 131 57.3
CDE02G0117 Ceratophyllum demersum HOM05D003442 ORTHO05D004005 1.6e-35 153.3 131 56.5
AUR62006614 Chenopodium quinoa HOM05D003442 ORTHO05D004005 1.6e-35 153.3 131 57.3
SEGI_25036 Sequoiadendron giganteum HOM05D003442 ORTHO05D004005 1.6e-35 153.3 131 55.0
HPP92_007347 Vanilla planifolia HOM05D003442 ORTHO05D004005 2.1e-35 152.9 131 55.7
Sopen12g004770 Solanum pennellii HOM05D003442 ORTHO05D004005 1.4e-34 150.2 131 58.0
PSO675G6576 Papaver somniferum HOM05D003442 ORTHO05D004005 4.0e-34 148.7 131 57.3
SGA_v2.0_scaffold83G26364 Striga asiatica HOM05D003442 ORTHO05D004005 6.8e-34 147.9 119 60.5
PGSC0003DMG400007911 Solanum tuberosum HOM05D003442 ORTHO05D004005 8.9e-34 147.5 131 56.5
CDE02G3771 Ceratophyllum demersum HOM05D003442 ORTHO05D004005 2.6e-33 146.0 127 55.1
Pp3c10_2890 Physcomitrium patens HOM05D003442 ORTHO05D004005 7.5e-33 144.4 131 53.4
Hund21933 Selenicereus undatus HOM05D003442 ORTHO05D004005 1.7e-32 143.3 131 53.4
Pp3c1_26980 Physcomitrium patens HOM05D003442 ORTHO05D004005 1.4e-31 140.2 131 50.4
SMO361G0576 Selaginella moellendorffii HOM05D003442 ORTHO05D004005 4.1e-31 138.7 131 50.4
AagrBONN_evm.TU.Sc2ySwM_344.2700 Anthoceros agrestis HOM05D003442 ORTHO05D004005 3.5e-30 135.6 131 51.1
vmacro00759 Vaccinium macrocarpon HOM05D003442 ORTHO05D004005 2.3e-29 132.9 111 61.3
SGA_v2.0_scaffold340G49316 Striga asiatica HOM05D003442 ORTHO05D007315 1.9e-28 129.8 111 60.4
Mapoly0102s0002 Marchantia polymorpha HOM05D003442 ORTHO05D004005 8.1e-27 124.4 131 46.6
CANSAT35G0024 Cannabis sativa HOM05D003442 ORTHO05D004005 1.4e-26 123.6 144 50.0
ClCG10G016340 Citrullus lanatus HOM05D003442 ORTHO05D004005 1.4e-26 123.6 120 54.2
CANSAT35G0263 Cannabis sativa HOM05D003442 ORTHO05D004005 1.2e-25 120.6 131 51.1
CANSAT56G1635 Cannabis sativa HOM05D003442 ORTHO05D004005 1.2e-25 120.6 131 51.1
AL5G22860 Arabidopsis lyrata HOM05D003442 ORTHO05D004005 6.4e-24 114.8 101 54.5
Cre01.g027800 Chlamydomonas reinhardtii HOM05D003442 ORTHO05D004005 7.1e-23 111.3 131 42.0
Nitab4.5_0003759g0020 Nicotiana tabacum HOM05D003442 ORTHO05D004005 7.1e-23 111.3 131 46.6
Nitab4.5_0006810g0020 Nicotiana tabacum HOM05D003442 ORTHO05D004005 8.6e-21 104.4 131 44.3
CDE04G3472 Ceratophyllum demersum HOM05D003442 ORTHO05D004005 2.1e-19 99.8 91 49.5
Sed0024694 Sechium edule HOM05D003442 ORTHO05D004005 1.1e-18 97.4 131 47.3
AagrBONN_evm.TU.Sc2ySwM_368.2763 Anthoceros agrestis HOM05D003442 ORTHO05D004005 1.4e-18 97.1 135 37.8
MCO09G349 Micromonas commoda HOM05D003442 ORTHO05D004005 3.1e-18 95.9 128 39.8
PRCOL_00001521 Prasinoderma coloniale HOM05D003442 ORTHO05D004005 1.7e-16 90.1 131 34.4
Lsat_1_v5_gn_2_1040 Lactuca sativa HOM05D003442 ORTHO05D004005 3.8e-16 89.0 131 41.2
Ciclev10033985m.g Citrus clementina HOM05D003442 ORTHO05D004005 6.4e-16 88.2 61 72.1
PGSC0003DMG402011206 Solanum tuberosum HOM05D003442 ORTHO05D004005 4.3e-12 75.5 49 75.5
CBR_g3526 Chara braunii HOM05D003442 ORTHO05D004005 4.7e-11 72.0 61 54.1
MD01G1238200 Malus domestica HOM05D003442 ORTHO05D004005 8.1e-11 71.2 49 69.4
Pp3c2_19490 Physcomitrium patens HOM05D003442 ORTHO05D004005 9.3e-07 57.8 49 46.9
Cfa024478 Carpinus fangiana HOM05D003442 ORTHO05D122614 4.6e-06 55.5 132 32.6


User provided reference genes

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