Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI02579 Sapria himalayana HOM05D021677 ORTHO05D010679 9.3e-234 813.1 403 100.0
GSVIVG01023989001 Vitis vinifera HOM05D000017 ORTHO05D000013 2.0e-87 327.0 512 37.5
GSVIVG01038019001 Vitis vinifera HOM05D000017 ORTHO05D000013 1.5e-50 204.5 519 29.1
SHI39021 Sapria himalayana HOM05D000017 ORTHO05D000013 5.7e-50 202.6 512 28.3
SHI15679 Sapria himalayana HOM05D000017 ORTHO05D000013 7.5e-50 202.2 194 58.2
SHI15678 Sapria himalayana HOM05D021677 ORTHO05D010679 1.3e-49 201.4 258 46.5
SHI26772 Sapria himalayana HOM05D007114 ORTHO05D010679 2.0e-47 194.1 393 30.5
SHI00941 Sapria himalayana HOM05D000017 ORTHO05D000013 1.1e-45 188.3 500 27.8
SHI13356 Sapria himalayana HOM05D021677 ORTHO05D010679 1.6e-44 184.5 201 51.7
SHI31229 Sapria himalayana HOM05D007114 ORTHO05D010679 8.9e-43 178.7 269 41.6
SHI13357 Sapria himalayana HOM05D007114 ORTHO05D000013 1.3e-38 164.9 154 58.4
SHI15142 Sapria himalayana HOM05D007114 ORTHO05D010679 2.5e-37 160.6 315 33.0
SHI09255 Sapria himalayana HOM05D007114 ORTHO05D010679 1.2e-36 158.3 433 29.6
Rhsim10G0108100 Rhododendron simsii HOM05D000017 ORTHO05D000013 4.0e-35 153.3 504 24.8
CSS0003176 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 6.8e-35 152.5 498 25.9
Rhsim13G0165500 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.1e-32 145.2 504 24.4
SHI12070 Sapria himalayana HOM05D007114 ORTHO05D000013 1.8e-32 144.4 180 43.9
Hma1.2p1_1473F.1_g285740 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.6e-31 139.8 481 24.3
Rhsim06G0097700 Rhododendron simsii HOM05D000017 ORTHO05D000013 4.6e-31 139.8 504 24.4
SHI26833 Sapria himalayana HOM05D007114 ORTHO05D000013 6.0e-31 139.4 182 42.3
Rhsim09G0072900 Rhododendron simsii HOM05D000017 ORTHO05D000013 5.6e-29 132.9 356 27.0
RhsimUnG0240100 Rhododendron simsii HOM05D000017 ORTHO05D000013 9.5e-29 132.1 356 27.0
SHI16487 Sapria himalayana HOM05D007114 ORTHO05D000013 2.1e-28 131.0 172 43.0
Hma1.2p1_0487F.1_g163640 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.4e-27 128.3 515 22.9
Hma1.2p1_0704F.1_g206830 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.3e-27 127.5 515 22.9
Hma1.2p1_0020F.1_g013900 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.1e-27 127.1 515 22.9
Hma1.2p1_0055F.1_g031350 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.1e-27 127.1 515 22.9
Hma1.2p1_0240F.1_g100330 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.8e-27 125.9 515 22.7
Hma1.2p1_0062F.1_g034250 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.5e-26 124.8 506 22.1
Hma1.2p1_1257F.1_g270760 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.5e-26 124.8 515 23.5
Hma1.2p1_0565F.1_g179620 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.8e-26 122.9 494 23.9
SHI01102 Sapria himalayana HOM05D007114 ORTHO05D010679 7.5e-26 122.5 159 40.3
Hma1.2p1_0909F.1_g235780 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.7e-25 121.3 515 22.5
SHI04414 Sapria himalayana HOM05D007114 ORTHO05D010679 3.2e-24 117.1 159 37.7
GSVIVG01014078001 Vitis vinifera HOM05D000017 ORTHO05D000013 4.1e-24 116.7 527 22.8
SHI32761 Sapria himalayana HOM05D007114 ORTHO05D000013 5.4e-24 116.3 143 49.7
SHI20064 Sapria himalayana HOM05D021677 ORTHO05D010519 1.2e-23 115.2 160 45.6
SHI07886 Sapria himalayana HOM05D007114 ORTHO05D010679 3.5e-23 113.6 214 31.8
Rhsim11G0055700 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.3e-22 111.7 474 22.6
SHI14606 Sapria himalayana HOM05D007114 ORTHO05D000013 8.6e-22 109.0 156 44.2
SHI33177 Sapria himalayana HOM05D007114 ORTHO05D000013 1.5e-21 108.2 156 40.4
SHI46483 Sapria himalayana HOM05D007114 ORTHO05D000013 1.5e-21 108.2 168 39.3
SHI14682 Sapria himalayana HOM05D007114 ORTHO05D000013 1.9e-21 107.8 188 38.8
Rhsim05G0107200 Rhododendron simsii HOM05D000017 ORTHO05D000013 5.6e-21 106.3 470 21.7
SHI10878 Sapria himalayana HOM05D007114 ORTHO05D000013 5.6e-21 106.3 169 36.7
SHI01138 Sapria himalayana HOM05D007114 ORTHO05D000013 1.6e-20 104.8 118 48.3
Actinidia16256 Actinidia chinensis HOM05D000017 ORTHO05D000013 1.8e-19 101.3 475 21.3
SHI14650 Sapria himalayana HOM05D007114 ORTHO05D010679 3.1e-19 100.5 191 35.6
CSS0013232 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 6.8e-19 99.4 351 22.8
Rhsim04G0123600 Rhododendron simsii HOM05D000017 ORTHO05D000013 6.8e-19 99.4 313 25.9
SHI13163 Sapria himalayana HOM05D007114 ORTHO05D010679 7.5e-18 95.9 179 35.8
SHI26834 Sapria himalayana HOM05D007114 ORTHO05D010679 8.3e-17 92.4 101 42.6
Nn4g26520 Nelumbo nucifera HOM05D000017 ORTHO05D000013 5.4e-16 89.7 355 23.7
RhsimUnG0136400 Rhododendron simsii HOM05D000017 ORTHO05D000013 5.4e-16 89.7 298 22.8
Hma1.2p1_0062F.1_g034320 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 7.1e-16 89.4 353 21.5
Nn4g26534 Nelumbo nucifera HOM05D000017 ORTHO05D000013 7.1e-16 89.4 358 22.9
ECA248G0634 Erigeron canadensis HOM05D000017 ORTHO05D000013 9.2e-16 89.0 295 23.1
Rhsim13G0231800 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.2e-15 88.6 363 21.8
SHI00561 Sapria himalayana HOM05D007114 ORTHO05D010679 1.2e-15 88.6 172 31.4
ECA234G0672 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.6e-15 88.2 238 24.8
SHI20818 Sapria himalayana HOM05D007114 ORTHO05D000013 2.1e-15 87.8 267 31.1
SHI11544 Sapria himalayana HOM05D007114 ORTHO05D010679 2.7e-15 87.4 101 38.6
Rhsim01G0167700 Rhododendron simsii HOM05D000017 ORTHO05D000013 3.5e-15 87.0 235 25.5
SHI26860 Sapria himalayana HOM05D007114 ORTHO05D000013 1.0e-14 85.5 67 56.7
SHI12467 Sapria himalayana HOM05D007114 ORTHO05D000013 1.3e-14 85.1 133 39.8
Hund00543 Selenicereus undatus HOM05D000017 ORTHO05D000013 1.7e-14 84.7 173 27.7
SHI09293 Sapria himalayana HOM05D007114 ORTHO05D010679 3.9e-14 83.6 132 34.8
SHI07887 Sapria himalayana HOM05D007114 ORTHO05D000013 5.1e-14 83.2 120 42.5
SHI23941 Sapria himalayana HOM05D007114 ORTHO05D010679 5.1e-14 83.2 131 38.9
HanXRQChr11g0341791 Helianthus annuus HOM05D000017 ORTHO05D000013 6.6e-14 82.8 261 21.1
HanXRQChr16g0525301 Helianthus annuus HOM05D000017 ORTHO05D000013 1.5e-13 81.6 233 24.5
SHI04627 Sapria himalayana HOM05D007114 ORTHO05D000013 1.9e-13 81.3 148 37.2
Nitab4.5_0011238g0010 Nicotiana tabacum HOM05D000017 ORTHO05D000013 2.5e-13 80.9 353 20.7
Actinidia16253 Actinidia chinensis HOM05D000017 ORTHO05D000013 3.3e-13 80.5 363 21.5
THA.LOC104818751 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 3.3e-13 80.5 236 23.3
Rhsim03G0131400 Rhododendron simsii HOM05D000017 ORTHO05D000013 4.3e-13 80.1 412 25.2
SHI14680 Sapria himalayana HOM05D007114 ORTHO05D010679 5.6e-13 79.7 102 38.2
AT3G05850 Arabidopsis thaliana HOM05D000017 ORTHO05D000013 7.3e-13 79.3 237 24.5
Thhalv10020100m.g Eutrema salsugineum HOM05D000017 ORTHO05D000013 7.3e-13 79.3 237 24.5
SHI10293 Sapria himalayana HOM05D007114 ORTHO05D000013 7.3e-13 79.3 71 47.9
CDE10G0466 Ceratophyllum demersum HOM05D000017 ORTHO05D000013 9.5e-13 79.0 362 20.2
SHI19257 Sapria himalayana HOM05D007114 ORTHO05D010679 9.5e-13 79.0 81 49.4
AL3G16600 Arabidopsis lyrata HOM05D000017 ORTHO05D000013 1.2e-12 78.6 237 24.5
BraA01t04470Z Brassica rapa HOM05D000017 ORTHO05D000013 1.2e-12 78.6 237 23.6
SHI14055 Sapria himalayana HOM05D007114 ORTHO05D000013 1.2e-12 78.6 156 33.3
A05p42210 Brassica napus HOM05D000017 ORTHO05D000013 1.6e-12 78.2 237 24.1
BolC5t34801H Brassica oleracea HOM05D000017 ORTHO05D000013 1.6e-12 78.2 237 24.1
BolC1t05660H Brassica oleracea HOM05D000017 ORTHO05D000013 2.8e-12 77.4 237 22.8
Hma1.2p1_0445F.1_g154390 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.8e-12 77.4 280 25.7
Gorai.007G309200 Gossypium raimondii HOM05D000017 ORTHO05D000013 3.6e-12 77.0 235 24.3
Sp3g04710 Schrenkiella parvula HOM05D000017 ORTHO05D000013 3.6e-12 77.0 237 23.6
THA.LOC104821747 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 3.6e-12 77.0 235 23.0
Actinidia28494 Actinidia chinensis HOM05D000017 ORTHO05D008036 6.2e-12 76.3 131 34.4
Rhsim12G0034000 Rhododendron simsii HOM05D000017 ORTHO05D000013 6.2e-12 76.3 184 31.0
Sabra13G0002200 Salix brachista HOM05D000017 ORTHO05D000013 1.4e-11 75.1 234 22.6
SHI28997 Sapria himalayana HOM05D007114 ORTHO05D010679 1.4e-11 75.1 129 36.4
SHI30347 Sapria himalayana HOM05D007114 ORTHO05D010679 1.4e-11 75.1 255 23.1
SHI13779 Sapria himalayana HOM05D007114 ORTHO05D000013 2.4e-11 74.3 54 63.0
Gorai.006G266700 Gossypium raimondii HOM05D000017 ORTHO05D000013 3.1e-11 73.9 231 24.2
COL.COLO4_26705 Corchorus olitorius HOM05D056155 ORTHO05D010679 5.2e-11 73.2 242 22.3
Ciclev10011129m.g Citrus clementina HOM05D000017 ORTHO05D000013 6.8e-11 72.8 234 22.2
SHI26770 Sapria himalayana HOM05D007114 ORTHO05D000013 8.9e-11 72.4 246 28.0
TWI56G0503 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 8.9e-11 72.4 234 22.2
MD13G1140100 Malus domestica HOM05D000017 ORTHO05D000013 1.2e-10 72.0 247 23.1
SHI22976 Sapria himalayana HOM05D007114 ORTHO05D010679 1.2e-10 72.0 159 32.1
Psat4g021080 Pisum sativum HOM05D000017 ORTHO05D000013 1.5e-10 71.6 244 22.1
SHI14400 Sapria himalayana HOM05D007114 ORTHO05D010679 2.0e-10 71.2 54 57.4
SHI15613 Sapria himalayana HOM05D000017 ORTHO05D000013 2.0e-10 71.2 87 48.3
SHI15731 Sapria himalayana HOM05D000017 ORTHO05D000013 2.0e-10 71.2 140 36.4
SHI15301 Sapria himalayana HOM05D007114 ORTHO05D010679 2.6e-10 70.9 355 22.3
TPR.G2641 Trifolium pratense HOM05D000017 ORTHO05D000013 5.8e-10 69.7 235 22.6
Nn4g26595 Nelumbo nucifera HOM05D000017 ORTHO05D000013 7.6e-10 69.3 203 27.1
Oeu002324.1 Olea europaea HOM05D000017 ORTHO05D000013 7.6e-10 69.3 212 25.0
Oeu031108.1 Olea europaea HOM05D000017 ORTHO05D000013 7.6e-10 69.3 212 23.6
SHI32762 Sapria himalayana HOM05D021677 ORTHO05D367260 7.6e-10 69.3 194 35.6
Nn1g08727 Nelumbo nucifera HOM05D000017 ORTHO05D000013 9.9e-10 68.9 402 23.1
SHI06195 Sapria himalayana HOM05D007114 ORTHO05D000013 1.3e-09 68.6 47 66.0
SHI07760 Sapria himalayana HOM05D007114 ORTHO05D010679 1.7e-09 68.2 104 36.5
AUR62006812 Chenopodium quinoa HOM05D000017 ORTHO05D000013 2.2e-09 67.8 233 22.3
Oeu061112.1 Olea europaea HOM05D000017 ORTHO05D000013 2.2e-09 67.8 212 25.9
Hund14184 Selenicereus undatus HOM05D000017 ORTHO05D000013 2.2e-09 67.8 177 24.3
Gorai.013G209900 Gossypium raimondii HOM05D000017 ORTHO05D000013 4.9e-09 66.6 230 21.3
Oeu051010.1 Olea europaea HOM05D000017 ORTHO05D000013 4.9e-09 66.6 233 25.3
Hund00770 Selenicereus undatus HOM05D000017 ORTHO05D000013 8.4e-09 65.9 178 24.2
ECA246G4439 Erigeron canadensis HOM05D000017 ORTHO05D000013 1.4e-08 65.1 232 22.0
Duzib177G0093 Durio zibethinus HOM05D000017 ORTHO05D000013 1.9e-08 64.7 234 21.8
SHI13012 Sapria himalayana HOM05D007114 ORTHO05D000013 1.9e-08 64.7 128 35.9
CANSAT80G2780 Cannabis sativa HOM05D000017 ORTHO05D000013 2.4e-08 64.3 225 24.4
Oeu025849.1 Olea europaea HOM05D000017 ORTHO05D000013 5.4e-08 63.2 212 23.6
CANSAT35G1386 Cannabis sativa HOM05D000017 ORTHO05D000013 9.2e-08 62.4 176 22.2
Atru.chr2.2336 Acer truncatum HOM05D000017 ORTHO05D000013 1.2e-07 62.0 161 24.2
Atru.chr3.2988 Acer truncatum HOM05D000017 ORTHO05D000013 1.2e-07 62.0 234 21.8
CANSAT35G1887 Cannabis sativa HOM05D000017 ORTHO05D000013 1.2e-07 62.0 242 21.5
SHI29005 Sapria himalayana HOM05D007114 ORTHO05D000013 1.2e-07 62.0 63 46.0
Aqoxy4G00683 Aquilegia oxysepala HOM05D000447 ORTHO05D000013 1.6e-07 61.6 232 20.7
Oeu040087.1 Olea europaea HOM05D000017 ORTHO05D000013 2.1e-07 61.2 193 23.8
Oeu053762.1 Olea europaea HOM05D000017 ORTHO05D000013 2.1e-07 61.2 195 22.6
CANSAT54G1096 Cannabis sativa HOM05D000017 ORTHO05D000013 2.7e-07 60.8 258 23.3
Oeu022962.1 Olea europaea HOM05D000017 ORTHO05D000013 2.7e-07 60.8 200 26.0
SHI02389 Sapria himalayana HOM05D007114 ORTHO05D000013 2.7e-07 60.8 120 35.8
Atru.chr3.4260 Acer truncatum HOM05D000017 ORTHO05D000013 4.6e-07 60.1 234 20.9
CANSAT11G1736 Cannabis sativa HOM05D000017 ORTHO05D000013 6.0e-07 59.7 171 27.5
HanXRQChr12g0356891 Helianthus annuus HOM05D000017 ORTHO05D000013 6.0e-07 59.7 234 21.8
CANSAT11G2629 Cannabis sativa HOM05D000017 ORTHO05D000013 7.8e-07 59.3 226 23.5
CSS0037974 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.0e-06 58.9 240 20.4
Oeu017271.1 Olea europaea HOM05D000017 ORTHO05D000013 1.0e-06 58.9 191 21.5
Rhsim06G0118700 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.0e-06 58.9 104 26.0
SHI16486 Sapria himalayana HOM05D007114 ORTHO05D010679 1.0e-06 58.9 202 24.3
DCAR_014907 Daucus carota HOM05D000017 ORTHO05D000013 1.7e-06 58.2 325 20.9
Oeu027141.1 Olea europaea HOM05D000017 ORTHO05D000013 1.7e-06 58.2 215 21.4
Actinidia23256 Actinidia chinensis HOM05D000017 ORTHO05D000013 2.3e-06 57.8 247 19.0
Oeu036734.1 Olea europaea HOM05D000017 ORTHO05D000013 2.3e-06 57.8 215 20.9
Atru.chr7.592 Acer truncatum HOM05D000017 ORTHO05D000013 3.0e-06 57.4 234 20.5
SHI08871 Sapria himalayana HOM05D007114 ORTHO05D000013 3.0e-06 57.4 75 38.7
Hund26174 Selenicereus undatus HOM05D000017 ORTHO05D000013 3.0e-06 57.4 203 22.2
ATR0739G184 Amborella trichopoda HOM05D000017 ORTHO05D000013 3.9e-06 57.0 234 20.1
Oeu023181.1 Olea europaea HOM05D000017 ORTHO05D000013 3.9e-06 57.0 190 26.3
SHI24921 Sapria himalayana HOM05D007114 ORTHO05D000013 3.9e-06 57.0 139 30.9
Atru.chr1.3834 Acer truncatum HOM05D000017 ORTHO05D000013 5.1e-06 56.6 237 18.6
HanXRQChr03g0078871 Helianthus annuus HOM05D000017 ORTHO05D000013 5.1e-06 56.6 97 29.9
Oeu041491.1 Olea europaea HOM05D000017 ORTHO05D000013 5.1e-06 56.6 234 20.5
Oeu043048.1 Olea europaea HOM05D000017 ORTHO05D000013 5.1e-06 56.6 234 20.5
Oeu000015.1 Olea europaea HOM05D000017 ORTHO05D000013 6.6e-06 56.2 186 23.7
Oeu056028.1 Olea europaea HOM05D000017 ORTHO05D000013 6.6e-06 56.2 82 35.4
SHI03083 Sapria himalayana HOM05D007114 ORTHO05D000013 6.6e-06 56.2 142 30.3
CANSAT01G0081 Cannabis sativa HOM05D000017 ORTHO05D000013 8.7e-06 55.8 243 21.0
CANSAT11G1094 Cannabis sativa HOM05D000017 ORTHO05D000013 8.7e-06 55.8 230 20.4
ECA247G2783 Erigeron canadensis HOM05D000017 ORTHO05D000013 8.7e-06 55.8 76 38.2
Prupe.8G229900 Prunus persica HOM05D000017 ORTHO05D000013 8.7e-06 55.8 199 24.1


User provided reference genes

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