Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI02511 Sapria himalayana HOM05D006889 ORTHO05D008614 3.4e-33 144.4 75 100.0
Dinv25463 Davidia involucrata HOM05D006889 ORTHO05D008614 1.1e-23 112.8 70 87.1
MBI14_g11688_MAGBIO Magnolia biondii HOM05D006889 ORTHO05D008614 2.5e-23 111.7 71 85.9
TAR369G0178 Trochodendron aralioides HOM05D006889 ORTHO05D008614 4.2e-23 110.9 70 85.7
MSTRG.4328 Avicennia marina HOM05D006889 ORTHO05D008614 5.5e-23 110.5 70 85.7
Nn6g34807 Nelumbo nucifera HOM05D006889 ORTHO05D008614 5.5e-23 110.5 70 84.3
Sabra16G0274900 Salix brachista HOM05D006889 ORTHO05D008614 5.5e-23 110.5 70 85.7
Actinidia31405 Actinidia chinensis HOM05D006889 ORTHO05D008614 7.2e-23 110.2 70 84.3
MD07G1075300 Malus domestica HOM05D006889 ORTHO05D008614 7.2e-23 110.2 70 85.7
HPP92_000052 Vanilla planifolia HOM05D006889 ORTHO05D008614 7.2e-23 110.2 69 84.1
Eucgr.K00107 Eucalyptus grandis HOM05D006889 ORTHO05D008614 1.2e-22 109.4 69 87.0
Manes.09G119000 Manihot esculenta HOM05D006889 ORTHO05D008614 1.2e-22 109.4 69 87.0
Potri.001G412800 Populus trichocarpa HOM05D006889 ORTHO05D008614 1.2e-22 109.4 69 87.0
CiPaw.07G182100 Carya illinoinensis HOM05D006889 ORTHO05D008614 1.6e-22 109.0 69 87.0
MD07G1304400 Malus domestica HOM05D006889 ORTHO05D008614 1.6e-22 109.0 70 84.3
CDE08G0956 Ceratophyllum demersum HOM05D006889 ORTHO05D008614 2.1e-22 108.6 70 81.4
HanXRQChr07g0200571 Helianthus annuus HOM05D006889 ORTHO05D008614 2.1e-22 108.6 69 87.0
Ciclev10012044m.g Citrus clementina HOM05D006889 ORTHO05D008614 2.7e-22 108.2 69 85.5
Prupe.2G323000 Prunus persica HOM05D006889 ORTHO05D008614 2.7e-22 108.2 69 85.5
Solyc04g009830.3 Solanum lycopersicum HOM05D006889 ORTHO05D008614 2.7e-22 108.2 68 85.3
Sopen04g004970 Solanum pennellii HOM05D006889 ORTHO05D008614 2.7e-22 108.2 68 85.3
Ah.14g084260 Amaranthus hybridus HOM05D006889 ORTHO05D008614 3.6e-22 107.8 70 84.3
CSS0010313 Camellia sinensis var. sinensis HOM05D006889 ORTHO05D008614 3.6e-22 107.8 69 84.1
AUR62039766 Chenopodium quinoa HOM05D006889 ORTHO05D008614 3.6e-22 107.8 70 82.9
Migut.F00816 Erythranthe guttata HOM05D006889 ORTHO05D008614 3.6e-22 107.8 69 85.5
Gohir.A06G144633 Gossypium hirsutum HOM05D006889 ORTHO05D008614 3.6e-22 107.8 69 84.1
Gohir.D06G150400 Gossypium hirsutum HOM05D006889 ORTHO05D008614 3.6e-22 107.8 69 84.1
Peaxi162Scf00135g00913 Petunia axillaris HOM05D006889 ORTHO05D008614 3.6e-22 107.8 69 84.1
ATR0081G022 Amborella trichopoda HOM05D006889 ORTHO05D008614 4.7e-22 107.5 70 80.0
Gorai.010G175600 Gossypium raimondii HOM05D006889 ORTHO05D008614 4.7e-22 107.5 69 84.1
Oeu033252.2 Olea europaea HOM05D006889 ORTHO05D008614 4.7e-22 107.5 67 86.6
Phvul.002G186100 Phaseolus vulgaris HOM05D006889 ORTHO05D008614 4.7e-22 107.5 69 82.6
Sc08g0005450 Simmondsia chinensis HOM05D006889 ORTHO05D008614 4.7e-22 107.5 69 82.6
GSVIVG01024467001 Vitis vinifera HOM05D006889 ORTHO05D008614 4.7e-22 107.5 69 84.1
Cc02_g09110 Coffea canephora HOM05D006889 ORTHO05D008614 6.1e-22 107.1 69 82.6
Glyma.05G136000 Glycine max HOM05D006889 ORTHO05D008614 6.1e-22 107.1 69 82.6
Lalb_Chr13g0293181 Lupinus albus HOM05D006889 ORTHO05D008614 6.1e-22 107.1 69 84.1
Nitab4.5_0000930g0060 Nicotiana tabacum HOM05D006889 ORTHO05D008614 6.1e-22 107.1 70 81.4
PGR142G0052 Punica granatum HOM05D006889 ORTHO05D008614 6.1e-22 107.1 68 86.8
ECA238G0057 Erigeron canadensis HOM05D006889 ORTHO05D008614 8.0e-22 106.7 69 84.1
PGSC0003DMG400025437 Solanum tuberosum HOM05D006889 ORTHO05D008614 8.0e-22 106.7 68 83.8
Haze_22241 Corylus avellana HOM05D006889 ORTHO05D008614 1.0e-21 106.3 71 81.7
QL09p026702 Quercus lobata HOM05D006889 ORTHO05D008614 1.0e-21 106.3 69 84.1
SalBow3G4178 Salvia bowleyana HOM05D006889 ORTHO05D008614 1.4e-21 105.9 70 82.9
TWI60G1635 Tripterygium wilfordii HOM05D006889 ORTHO05D008614 1.4e-21 105.9 68 86.8
EL10Ac8g18884 Beta vulgaris HOM05D006889 ORTHO05D008614 1.8e-21 105.5 70 82.9
Lj4g0013326 Lotus japonicus HOM05D006889 ORTHO05D008614 1.8e-21 105.5 69 81.2
Nitab4.5_0002651g0040 Nicotiana tabacum HOM05D006889 ORTHO05D008614 2.3e-21 105.1 70 80.0
Cpa.g.sc140.53 Carica papaya HOM05D006889 ORTHO05D008614 3.0e-21 104.8 68 83.8
Hma1.2p1_0164F.1_g073300 Hydrangea macrophylla HOM05D006889 ORTHO05D008614 3.0e-21 104.8 70 78.6
Hund18033 Selenicereus undatus HOM05D006889 ORTHO05D008614 3.0e-21 104.8 69 84.1
Thecc.06G017600 Theobroma cacao HOM05D006889 ORTHO05D008614 5.2e-21 104.0 69 79.7
Atru.chr12.2063 Acer truncatum HOM05D006889 ORTHO05D008614 6.7e-21 103.6 69 81.2
CsaV3_5G005080 Cucumis sativus L. HOM05D006889 ORTHO05D008614 6.7e-21 103.6 69 81.2
RcHm_v2.0_Chr1g0383401 Rosa chinensis HOM05D006889 ORTHO05D008614 6.7e-21 103.6 69 81.2
THA.LOC104805469 Tarenaya hassleriana HOM05D006889 ORTHO05D008614 6.7e-21 103.6 68 83.8
Zm00001eb260210 Zea mays HOM05D006889 ORTHO05D008614 8.8e-21 103.2 69 78.3
Carub.0004s1859 Capsella rubella HOM05D006889 ORTHO05D008614 1.1e-20 102.8 68 83.8
Ca_18207_v3 Cicer arietinum L. HOM05D006889 ORTHO05D008614 1.5e-20 102.4 69 78.3
FAN03G0535 Fragaria x ananassa HOM05D006889 ORTHO05D008614 1.5e-20 102.4 68 80.9
AL4G32960 Arabidopsis lyrata HOM05D006889 ORTHO05D008614 2.0e-20 102.1 68 83.8
AT2G36740 Arabidopsis thaliana HOM05D006889 ORTHO05D008614 2.0e-20 102.1 68 83.8
MELO3C005447.2 Cucumis melo HOM05D006889 ORTHO05D008614 2.0e-20 102.1 69 81.2
PSO339G0304 Papaver somniferum HOM05D006889 ORTHO05D008614 2.0e-20 102.1 69 79.7
PSO384G0326 Papaver somniferum HOM05D006889 ORTHO05D008614 2.0e-20 102.1 69 79.7
Sp4g19020 Schrenkiella parvula HOM05D006889 ORTHO05D008614 2.0e-20 102.1 68 82.4
Aqoxy4G02722 Aquilegia oxysepala HOM05D006889 ORTHO05D008614 2.6e-20 101.7 70 78.6
CARHR131100 Cardamine hirsuta HOM05D006889 ORTHO05D008614 2.6e-20 101.7 68 83.8
FvH4_7g33430 Fragaria vesca HOM05D006889 ORTHO05D008614 2.6e-20 101.7 68 80.9
FAN10G1689 Fragaria x ananassa HOM05D006889 ORTHO05D008614 2.6e-20 101.7 68 80.9
vmacro10779 Vaccinium macrocarpon HOM05D006889 ORTHO05D008614 2.6e-20 101.7 71 81.7
Thhalv10016833m.g Eutrema salsugineum HOM05D006889 ORTHO05D008614 3.3e-20 101.3 68 82.4
FAN01G0055 Fragaria x ananassa HOM05D006889 ORTHO05D008614 3.3e-20 101.3 68 79.4
BcaB02g09334 Brassica carinata HOM05D006889 ORTHO05D008614 4.4e-20 100.9 68 82.4
BcaC02g11793 Brassica carinata HOM05D006889 ORTHO05D008614 4.4e-20 100.9 68 80.9
C04p11290 Brassica napus HOM05D006889 ORTHO05D008614 4.4e-20 100.9 68 80.9
BolC4t22767H Brassica oleracea HOM05D006889 ORTHO05D008614 4.4e-20 100.9 68 80.9
BolC4t22783H Brassica oleracea HOM05D006889 ORTHO05D008614 4.4e-20 100.9 68 80.9
Sed0014561 Sechium edule HOM05D006889 ORTHO05D008614 5.7e-20 100.5 69 79.7
A05p09120 Brassica napus HOM05D006889 ORTHO05D008614 7.4e-20 100.1 68 80.9
BraA05t19868Z Brassica rapa HOM05D006889 ORTHO05D008614 7.4e-20 100.1 68 80.9
arahy.Tifrunner.gnm1.ann1.T52I9D Arachis hypogaea HOM05D006889 ORTHO05D008614 9.7e-20 99.8 72 76.4
FAN10G2743 Fragaria x ananassa HOM05D006889 ORTHO05D008614 9.7e-20 99.8 68 79.4
Psat7g087400 Pisum sativum HOM05D006889 ORTHO05D008614 1.3e-19 99.4 66 81.8
Aa31LG5G21960 Aethionema arabicum HOM05D006889 ORTHO05D008614 1.7e-19 99.0 67 82.1
arahy.Tifrunner.gnm1.ann1.I4BD9U Arachis hypogaea HOM05D006889 ORTHO05D008614 1.7e-19 99.0 66 80.3
TPR.G11931 Trifolium pratense HOM05D006889 ORTHO05D008614 1.7e-19 99.0 66 81.8
Os08g0192400 Oryza sativa ssp. japonica HOM05D006889 ORTHO05D008614 6.3e-19 97.1 65 76.9
TPR.G8913 Trifolium pratense HOM05D006889 ORTHO05D008614 1.8e-18 95.5 66 80.3
SGA_v2.0_scaffold62G21307 Striga asiatica HOM05D006889 ORTHO05D008614 4.1e-18 94.4 54 94.4
TPR.G34755 Trifolium pratense HOM05D006889 ORTHO05D008614 1.2e-17 92.8 63 81.0
Sabra16G0274600 Salix brachista HOM05D006889 ORTHO05D008614 2.0e-17 92.0 54 90.7
SEGI_10499 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 3.5e-17 91.3 71 66.2
unitig_747.g21800 Utricularia gibba HOM05D006889 ORTHO05D008614 3.8e-16 87.8 59 79.7
Mapoly0001s0482 Marchantia polymorpha HOM05D006889 ORTHO05D008614 3.2e-15 84.7 68 66.2
Pp3c14_17650 Physcomitrium patens HOM05D006889 ORTHO05D008614 6.1e-14 80.5 68 61.8
SMO165G0047 Selaginella moellendorffii HOM05D006889 ORTHO05D008614 1.8e-13 79.0 66 63.6
Lsat_1_v5_gn_2_107601 Lactuca sativa HOM05D006889 ORTHO05D008614 5.2e-13 77.4 45 93.3
CAN.G186.71 Capsicum annuum HOM05D006889 ORTHO05D008614 3.4e-12 74.7 48 81.2
SEGI_12666 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 1.3e-11 72.8 56 71.4
CBR_g38961 Chara braunii HOM05D006889 ORTHO05D008614 1.7e-11 72.4 67 59.7


User provided reference genes

Program Settings