Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI02385 Sapria himalayana HOM05D003962 ORTHO05D004714 7.0e-306 1053.1 531 100.0
Potri.012G013800 Populus trichocarpa HOM05D003962 ORTHO05D004714 8.5e-94 348.6 524 43.7
Manes.14G006600 Manihot esculenta HOM05D003962 ORTHO05D004714 2.5e-93 347.1 526 43.0
Sabra12G0018000 Salix brachista HOM05D003962 ORTHO05D004714 8.0e-92 342.0 523 42.3
Thecc.03G196300 Theobroma cacao HOM05D003962 ORTHO05D004714 1.5e-90 337.8 469 44.6
TWI23G0430 Tripterygium wilfordii HOM05D003962 ORTHO05D004714 3.7e-89 333.2 462 43.5
Cpa.g.sc3.71 Carica papaya HOM05D003962 ORTHO05D004714 1.1e-85 321.6 527 41.4
COL.COLO4_11264 Corchorus olitorius HOM05D003962 ORTHO05D004714 1.5e-85 321.2 526 39.9
Sabra15G0011900 Salix brachista HOM05D003962 ORTHO05D004714 9.4e-85 318.5 524 41.0
Potri.015G014800 Populus trichocarpa HOM05D003962 ORTHO05D004714 6.1e-84 315.8 525 42.3
TWI39G0414 Tripterygium wilfordii HOM05D003962 ORTHO05D004714 1.8e-83 314.3 462 42.9
Duzib084G0525 Durio zibethinus HOM05D003962 ORTHO05D004714 3.4e-82 310.1 524 39.1
TWI14G0330 Tripterygium wilfordii HOM05D003962 ORTHO05D004714 5.7e-82 309.3 460 41.5
Duzib068G0757 Durio zibethinus HOM05D003962 ORTHO05D004714 4.1e-80 303.1 465 42.6
MD01G1219900 Malus domestica HOM05D003962 ORTHO05D004714 5.4e-80 302.8 461 40.3
Gorai.007G015000 Gossypium raimondii HOM05D003962 ORTHO05D004714 2.7e-79 300.4 464 42.0
Duzib205G1946 Durio zibethinus HOM05D003962 ORTHO05D004714 3.5e-79 300.1 526 39.4
Haze_00190 Corylus avellana HOM05D003962 ORTHO05D004714 8.5e-78 295.4 455 41.5
Duzib205G1416 Durio zibethinus HOM05D003962 ORTHO05D004714 1.9e-77 294.3 524 38.9
Cfa016250 Carpinus fangiana HOM05D003962 ORTHO05D004714 2.1e-76 290.8 457 41.6
Prupe.2G311300 Prunus persica HOM05D003962 ORTHO05D004714 2.1e-76 290.8 454 41.0
Gohir.D11G014600 Gossypium hirsutum HOM05D003962 ORTHO05D004714 8.0e-76 288.9 464 41.6
Atru.chr1.164 Acer truncatum HOM05D003962 ORTHO05D004714 1.2e-74 285.0 526 37.1
Gohir.A11G014500 Gossypium hirsutum HOM05D003962 ORTHO05D004714 2.6e-74 283.9 464 40.7
CiPaw.05G251700 Carya illinoinensis HOM05D003962 ORTHO05D004714 7.5e-74 282.3 467 39.8
QL09p009481 Quercus lobata HOM05D003962 ORTHO05D004714 1.3e-73 281.6 458 40.6
Ciclev10004179m.g Citrus clementina HOM05D003962 ORTHO05D004714 5.4e-72 276.2 464 39.9
Gorai.007G015100 Gossypium raimondii HOM05D003962 ORTHO05D004714 7.0e-72 275.8 543 37.0
Gohir.A11G014600 Gossypium hirsutum HOM05D003962 ORTHO05D004714 9.2e-72 275.4 467 39.6
GSVIVG01038709001 Vitis vinifera HOM05D003962 ORTHO05D004714 7.8e-71 272.3 461 39.7
CANSAT21G2091 Cannabis sativa HOM05D003962 ORTHO05D004714 2.9e-70 270.4 457 41.4
MD07G1290200 Malus domestica HOM05D003962 ORTHO05D004714 2.9e-70 270.4 443 40.0
Gohir.D11G014700 Gossypium hirsutum HOM05D003962 ORTHO05D004714 3.8e-70 270.0 467 39.2
Glyma.04G236700 Glycine max HOM05D003962 ORTHO05D004714 8.6e-70 268.9 453 40.0
Phvul.009G053600 Phaseolus vulgaris HOM05D003962 ORTHO05D004714 2.5e-69 267.3 454 39.4
VMungo1309G1284 Vigna mungo HOM05D003962 ORTHO05D004714 2.5e-69 267.3 453 39.1
PGR042G1008 Punica granatum HOM05D003962 ORTHO05D004714 3.3e-69 266.9 452 39.8
Lj1g0008504 Lotus japonicus HOM05D003962 ORTHO05D004714 3.6e-68 263.5 450 39.8
Ca_16697_v3 Cicer arietinum L. HOM05D003962 ORTHO05D004714 6.1e-68 262.7 461 38.0
THA.LOC104800296 Tarenaya hassleriana HOM05D003962 ORTHO05D004714 1.2e-66 258.5 459 39.9
Glyma.06G127600 Glycine max HOM05D003962 ORTHO05D004714 4.4e-66 256.5 456 38.6
Medtr3g091280 Medicago truncatula HOM05D003962 ORTHO05D004714 5.7e-66 256.1 456 38.6
RcHm_v2.0_Chr1g0380961 Rosa chinensis HOM05D003962 ORTHO05D004714 1.3e-65 255.0 463 39.5
Manes.06G159800 Manihot esculenta HOM05D003962 ORTHO05D004714 6.4e-65 252.7 526 35.7
Eucgr.A01465 Eucalyptus grandis HOM05D003962 ORTHO05D004714 5.4e-64 249.6 524 36.5
CiPaw.06G010000 Carya illinoinensis HOM05D003962 ORTHO05D004714 1.0e-62 245.4 458 37.6
Nn1g01866 Nelumbo nucifera HOM05D003962 ORTHO05D004714 9.5e-61 238.8 494 36.2
FAN01G0781 Fragaria x ananassa HOM05D003962 ORTHO05D004714 1.6e-60 238.0 457 38.1
FAN06G4429 Fragaria x ananassa HOM05D003962 ORTHO05D004714 2.1e-60 237.7 457 37.6
FvH4_7g31740 Fragaria vesca HOM05D003962 ORTHO05D004714 2.8e-60 237.3 457 37.6
FAN06G4230 Fragaria x ananassa HOM05D003962 ORTHO05D004714 2.8e-60 237.3 457 37.6
TAR374G0911 Trochodendron aralioides HOM05D003962 ORTHO05D004714 8.0e-60 235.7 465 35.3
FAN10G2253 Fragaria x ananassa HOM05D003962 ORTHO05D004714 1.0e-59 235.3 464 38.4
FAN10G3613 Fragaria x ananassa HOM05D003962 ORTHO05D004714 1.8e-59 234.6 457 37.9
Carub.0008s1360 Capsella rubella HOM05D003962 ORTHO05D004714 3.1e-59 233.8 465 39.1
arahy.Tifrunner.gnm1.ann1.JYM9I0 Arachis hypogaea HOM05D003962 ORTHO05D004714 5.2e-59 233.0 460 35.4
Lalb_Chr08g0240331 Lupinus albus HOM05D003962 ORTHO05D004714 6.8e-59 232.6 454 37.2
AL8G28140 Arabidopsis lyrata HOM05D003962 ORTHO05D004714 1.2e-58 231.9 522 35.8
arahy.Tifrunner.gnm1.ann1.897SEY Arachis hypogaea HOM05D003962 ORTHO05D004714 2.6e-58 230.7 459 35.1
Aa31sc139G70 Aethionema arabicum HOM05D003962 ORTHO05D004714 3.4e-58 230.3 448 39.7
Dinv37529 Davidia involucrata HOM05D003962 ORTHO05D004714 5.8e-58 229.6 481 34.3
Sed0023111 Sechium edule HOM05D003962 ORTHO05D004714 5.8e-58 229.6 449 35.6
FAN03G1461 Fragaria x ananassa HOM05D003962 ORTHO05D004714 9.8e-58 228.8 464 37.5
Psat5g078120 Pisum sativum HOM05D003962 ORTHO05D004714 2.9e-57 227.3 464 36.4
ClCG01G000470 Citrullus lanatus HOM05D003962 ORTHO05D004714 6.4e-57 226.1 464 35.1
Nn3g19007 Nelumbo nucifera HOM05D003962 ORTHO05D004714 1.4e-56 224.9 474 34.4
MELO3C005882.2 Cucumis melo HOM05D003962 ORTHO05D004714 3.2e-56 223.8 460 35.2
Sp6g15570 Schrenkiella parvula HOM05D003962 ORTHO05D004714 1.2e-55 221.9 444 37.8
CsaV3_5G000540 Cucumis sativus L. HOM05D003962 ORTHO05D004714 1.0e-54 218.8 461 34.7
Cc08_g16110 Coffea canephora HOM05D003962 ORTHO05D004714 3.9e-54 216.9 473 33.8
Lalb_Chr11g0066791 Lupinus albus HOM05D003962 ORTHO05D004714 5.0e-54 216.5 452 35.0
CSS0016674 Camellia sinensis var. sinensis HOM05D003962 ORTHO05D004714 1.9e-53 214.5 467 33.6
CSS0043367 Camellia sinensis var. sinensis HOM05D003962 ORTHO05D004714 1.9e-53 214.5 471 33.5
Dinv38828 Davidia involucrata HOM05D003962 ORTHO05D004714 3.3e-53 213.8 478 34.3
Lalb_Chr23g0271551 Lupinus albus HOM05D003962 ORTHO05D004714 3.3e-53 213.8 460 34.3
Sed0017272 Sechium edule HOM05D003962 ORTHO05D004714 3.3e-53 213.8 452 32.7
TAR629G3347 Trochodendron aralioides HOM05D003962 ORTHO05D004714 9.5e-53 212.2 473 33.4
SalBow1G2835 Salvia bowleyana HOM05D003962 ORTHO05D004714 4.7e-52 209.9 488 33.8
SalBow1G4038 Salvia bowleyana HOM05D003962 ORTHO05D004714 4.7e-52 209.9 488 33.8
THA.LOC104825141 Tarenaya hassleriana HOM05D003962 ORTHO05D004714 8.1e-52 209.1 501 35.3
TPR.G17287 Trifolium pratense HOM05D003962 ORTHO05D004714 1.1e-51 208.8 434 36.4
CARHR266560 Cardamine hirsuta HOM05D003962 ORTHO05D004714 1.4e-51 208.4 442 36.2
EL10Ac3g05299 Beta vulgaris HOM05D003962 ORTHO05D004714 1.8e-51 208.0 469 35.0
AT5G53440 Arabidopsis thaliana HOM05D003962 ORTHO05D004714 3.1e-51 207.2 465 35.3
Thhalv10012484m.g Eutrema salsugineum HOM05D003962 ORTHO05D004714 6.8e-51 206.1 451 37.3
BcaNung06205 Brassica carinata HOM05D003962 ORTHO05D004714 8.9e-51 205.7 468 37.0
AUR62006109 Chenopodium quinoa HOM05D003962 ORTHO05D004714 1.5e-50 204.9 462 36.1
MBI07_g07101_MAGBIO Magnolia biondii HOM05D003962 ORTHO05D004714 1.5e-50 204.9 469 34.3
TAR636G0021 Trochodendron aralioides HOM05D003962 ORTHO05D004714 1.5e-50 204.9 471 34.2
Actinidia27315 Actinidia chinensis HOM05D003962 ORTHO05D004714 4.4e-50 203.4 465 32.3
BcaC01g06252 Brassica carinata HOM05D003962 ORTHO05D004714 5.8e-50 203.0 468 35.5
C03p17680 Brassica napus HOM05D003962 ORTHO05D004714 5.8e-50 203.0 468 35.5
BolC3t14179H Brassica oleracea HOM05D003962 ORTHO05D004714 5.8e-50 203.0 468 35.5
A03p15150 Brassica napus HOM05D003962 ORTHO05D004714 1.7e-49 201.4 468 35.3
TAR375G1139 Trochodendron aralioides HOM05D003962 ORTHO05D004714 1.7e-49 201.4 401 36.7
Actinidia04199 Actinidia chinensis HOM05D003962 ORTHO05D004714 2.2e-49 201.1 470 34.7
BraA03t10810Z Brassica rapa HOM05D003962 ORTHO05D004714 4.9e-49 199.9 468 35.0
CSS0006905 Camellia sinensis var. sinensis HOM05D003962 ORTHO05D004714 3.2e-48 197.2 368 35.1
CAN.G1804.9 Capsicum annuum HOM05D003962 ORTHO05D004714 3.2e-48 197.2 465 34.0
Actinidia22731 Actinidia chinensis HOM05D003962 ORTHO05D004714 1.6e-47 194.9 469 33.0
AUR62019379 Chenopodium quinoa HOM05D003962 ORTHO05D004714 1.6e-47 194.9 452 35.8
Sc19g0000840 Simmondsia chinensis HOM05D003962 ORTHO05D004714 1.6e-47 194.9 457 35.7
Aqoxy7G00097 Aquilegia oxysepala HOM05D003962 ORTHO05D004714 4.6e-47 193.4 468 31.6
GSVIVG01019537001 Vitis vinifera HOM05D003962 ORTHO05D005685 1.0e-46 192.2 466 32.4
Oeu063516.1 Olea europaea HOM05D003962 ORTHO05D004714 5.1e-46 189.9 439 32.6
Migut.A00639 Erythranthe guttata HOM05D003962 ORTHO05D004714 8.6e-46 189.1 491 32.6
PSO170G0250 Papaver somniferum HOM05D003962 ORTHO05D004714 8.6e-46 189.1 452 32.7
Peaxi162Scf00074g00821 Petunia axillaris HOM05D003962 ORTHO05D004714 1.1e-45 188.7 479 31.9
PSO063G5170 Papaver somniferum HOM05D003962 ORTHO05D004714 3.3e-45 187.2 427 33.5
Nitab4.5_0002944g0030 Nicotiana tabacum HOM05D003962 ORTHO05D004714 4.3e-45 186.8 458 32.3
Oeu054025.1 Olea europaea HOM05D003962 ORTHO05D004714 4.3e-45 186.8 460 31.3
Oeu009961.1 Olea europaea HOM05D003962 ORTHO05D004714 9.5e-45 185.7 448 32.4
Solyc08g082410.4 Solanum lycopersicum HOM05D003962 ORTHO05D004714 9.5e-45 185.7 465 31.8
DCAR_029893 Daucus carota HOM05D003962 ORTHO05D004714 2.1e-44 184.5 461 32.3
Nitab4.5_0007367g0070 Nicotiana tabacum HOM05D003962 ORTHO05D004714 8.1e-44 182.6 460 32.4
PGSC0003DMG400012278 Solanum tuberosum HOM05D003962 ORTHO05D004714 4.0e-43 180.3 444 32.4
Ah.07g205820 Amaranthus hybridus HOM05D003962 ORTHO05D004714 4.4e-42 176.8 462 34.0
Ah.13g070110 Amaranthus hybridus HOM05D003962 ORTHO05D004714 4.4e-42 176.8 467 33.0
vmacro11467 Vaccinium macrocarpon HOM05D003962 ORTHO05D004714 4.4e-42 176.8 451 33.0
MSTRG.13886 Avicennia marina HOM05D003962 ORTHO05D004714 2.9e-41 174.1 506 30.0
Hma1.2p1_0359F.1_g135210 Hydrangea macrophylla HOM05D003962 ORTHO05D004714 4.9e-41 173.3 395 34.4
Rhsim02G0244100 Rhododendron simsii HOM05D003962 ORTHO05D004714 4.1e-40 170.2 456 32.9
Thhalv10026934m.g Eutrema salsugineum HOM05D003962 ORTHO05D004714 1.2e-39 168.7 441 34.2
Rhsim02G0244200 Rhododendron simsii HOM05D003962 ORTHO05D004714 3.5e-39 167.2 455 32.3
MBI06_g08468_MAGBIO Magnolia biondii HOM05D003962 ORTHO05D004714 1.3e-38 165.2 498 30.5
Lj2A167T45 Lonicera japonica HOM05D003962 ORTHO05D004714 8.6e-38 162.5 506 30.8
Sc25g0000880 Simmondsia chinensis HOM05D003962 ORTHO05D004714 1.5e-37 161.8 453 31.6
vmacro11361 Vaccinium macrocarpon HOM05D003962 ORTHO05D004714 5.6e-37 159.8 471 31.4
MSTRG.25678 Avicennia marina HOM05D003962 ORTHO05D004714 1.2e-36 158.7 478 31.6
SGA_v2.0_scaffold305G47981 Striga asiatica HOM05D003962 ORTHO05D004714 2.0e-34 151.4 499 30.3
Oeu058004.1 Olea europaea HOM05D003962 ORTHO05D004714 1.7e-33 148.3 331 32.3
SGA_v2.0_scaffold96G29015 Striga asiatica HOM05D003962 ORTHO05D004714 2.2e-33 147.9 492 30.9
PSO384G0521 Papaver somniferum HOM05D003962 ORTHO05D004714 1.0e-30 139.0 460 30.2
Zm00001eb359440 Zea mays HOM05D003962 ORTHO05D004714 1.3e-30 138.7 457 28.7
PSO135G0074 Papaver somniferum HOM05D003962 ORTHO05D004714 1.7e-30 138.3 460 30.0
Os01g0655400 Oryza sativa ssp. japonica HOM05D003962 ORTHO05D004714 1.3e-28 132.1 456 28.1
Nitab4.5_0001210g0080 Nicotiana tabacum HOM05D003962 ORTHO05D004714 4.8e-28 130.2 246 35.8
HanXRQChr06g0166431 Helianthus annuus HOM05D003962 ORTHO05D004714 6.2e-28 129.8 442 29.6
Nitab4.5_0006775g0080 Nicotiana tabacum HOM05D003962 ORTHO05D004714 6.2e-28 129.8 246 35.8
HPP92_024026 Vanilla planifolia HOM05D003962 ORTHO05D004714 2.4e-27 127.9 262 34.7
Zm00001eb158050 Zea mays HOM05D003962 ORTHO05D004714 5.8e-26 123.2 463 26.8
unitig_0.g2842 Utricularia gibba HOM05D003962 ORTHO05D004714 3.2e-24 117.5 153 37.9
ATR0602G039 Amborella trichopoda HOM05D003962 ORTHO05D004714 1.6e-23 115.2 269 32.3
ECA246G1296 Erigeron canadensis HOM05D003962 ORTHO05D004714 1.6e-23 115.2 447 28.2
DCAR_006489 Daucus carota HOM05D003962 ORTHO05D004714 1.9e-21 108.2 435 27.1
CDE10G1062 Ceratophyllum demersum HOM05D003962 ORTHO05D004714 4.3e-21 107.1 372 29.0
unitig_88.g27642 Utricularia gibba HOM05D003962 ORTHO05D004714 1.5e-18 98.6 265 30.2
CDE10G0926 Ceratophyllum demersum HOM05D003962 ORTHO05D004714 2.6e-18 97.8 428 26.2
HanXRQChr17g0534811 Helianthus annuus HOM05D003962 ORTHO05D004714 5.8e-18 96.7 455 26.8
Prupe.5G120600 Prunus persica HOM05D003962 ORTHO05D004714 7.9e-15 86.3 461 25.8
ECA233G2741 Erigeron canadensis HOM05D003962 ORTHO05D004714 5.1e-14 83.6 240 32.5
Lsat_1_v5_gn_3_10880 Lactuca sativa HOM05D003962 ORTHO05D004714 4.8e-12 77.0 257 28.8
SEGI_14221 Sequoiadendron giganteum HOM05D003962 ORTHO05D004714 1.4e-11 75.5 460 27.4
CDE09G1087 Ceratophyllum demersum HOM05D003962 ORTHO05D004714 9.0e-11 72.8 437 27.7
CDE02G1812 Ceratophyllum demersum HOM05D003962 ORTHO05D004714 1.0e-09 69.3 391 27.4
SEGI_41344 Sequoiadendron giganteum HOM05D003962 ORTHO05D004714 7.1e-08 63.2 388 24.0


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