Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI02336 Sapria himalayana HOM05D006378 ORTHO05D007959 7.1e-65 250.4 119 100.0
Sabra06G0111000 Salix brachista HOM05D006378 ORTHO05D007959 1.2e-24 116.7 106 58.5
Manes.03G040400 Manihot esculenta HOM05D006378 ORTHO05D007959 6.1e-24 114.4 106 54.7
GSVIVG01015082001 Vitis vinifera HOM05D006378 ORTHO05D007959 8.7e-23 110.5 111 53.2
Thecc.09G076800 Theobroma cacao HOM05D006378 ORTHO05D007959 1.9e-22 109.4 106 52.8
Cpa.g.sc28.38 Carica papaya HOM05D006378 ORTHO05D007959 2.5e-22 109.0 111 52.3
Ah.09g231620 Amaranthus hybridus HOM05D006378 ORTHO05D007959 4.3e-22 108.2 106 53.8
CAN.G62.5 Capsicum annuum HOM05D006378 ORTHO05D007959 4.3e-22 108.2 106 51.9
Potri.006G141900 Populus trichocarpa HOM05D006378 ORTHO05D007959 4.3e-22 108.2 106 55.7
QL11p000773 Quercus lobata HOM05D006378 ORTHO05D007959 4.3e-22 108.2 105 54.3
CsaV3_1G041050 Cucumis sativus L. HOM05D006378 ORTHO05D007959 5.7e-22 107.8 107 52.3
Hma1.2p1_0179F.1_g079520 Hydrangea macrophylla HOM05D006378 ORTHO05D007959 2.8e-21 105.5 106 51.9
Nn8g38637 Nelumbo nucifera HOM05D006378 ORTHO05D007959 2.8e-21 105.5 106 50.9
unitig_578.g15677 Utricularia gibba HOM05D006378 ORTHO05D007959 2.8e-21 105.5 105 52.4
Carub.0002s2445 Capsella rubella HOM05D006378 ORTHO05D007959 8.2e-21 104.0 111 52.3
PGSC0003DMG400019029 Solanum tuberosum HOM05D006378 ORTHO05D007959 8.2e-21 104.0 106 50.0
MSTRG.19459 Avicennia marina HOM05D006378 ORTHO05D007959 1.1e-20 103.6 106 50.9
Duzib168G0703 Durio zibethinus HOM05D006378 ORTHO05D007959 1.1e-20 103.6 106 51.9
Solyc07g041870.3 Solanum lycopersicum HOM05D006378 ORTHO05D007959 1.1e-20 103.6 106 51.9
Atru.chr7.1707 Acer truncatum HOM05D006378 ORTHO05D007959 1.4e-20 103.2 106 50.9
CARHR071080 Cardamine hirsuta HOM05D006378 ORTHO05D007959 1.4e-20 103.2 108 54.6
MELO3C015521.2 Cucumis melo HOM05D006378 ORTHO05D007959 1.4e-20 103.2 107 51.4
Gohir.D06G075500 Gossypium hirsutum HOM05D006378 ORTHO05D007959 1.4e-20 103.2 106 49.1
Lalb_Chr08g0232591 Lupinus albus HOM05D006378 ORTHO05D007959 1.4e-20 103.2 106 50.0
Nitab4.5_0009436g0010 Nicotiana tabacum HOM05D006378 ORTHO05D007959 1.8e-20 102.8 106 49.1
AUR62025249 Chenopodium quinoa HOM05D006378 ORTHO05D007959 2.4e-20 102.4 106 50.0
Gohir.A06G076500 Gossypium hirsutum HOM05D006378 ORTHO05D007959 2.4e-20 102.4 106 48.1
Lj7C687T7 Lonicera japonica HOM05D006378 ORTHO05D007959 2.4e-20 102.4 109 50.5
Sopen07g021350 Solanum pennellii HOM05D006378 ORTHO05D007959 2.4e-20 102.4 106 50.9
CiPaw.03G206400 Carya illinoinensis HOM05D006378 ORTHO05D007959 3.1e-20 102.1 111 51.4
AL2G37770 Arabidopsis lyrata HOM05D006378 ORTHO05D007959 4.1e-20 101.7 112 53.6
AT1G77550 Arabidopsis thaliana HOM05D006378 ORTHO05D007959 4.1e-20 101.7 111 51.4
Haze_26013 Corylus avellana HOM05D006378 ORTHO05D007959 4.1e-20 101.7 106 50.9
DCAR_011949 Daucus carota HOM05D006378 ORTHO05D007959 4.1e-20 101.7 106 49.1
Thhalv10003638m.g Eutrema salsugineum HOM05D006378 ORTHO05D007959 4.1e-20 101.7 112 53.6
Cc06_g12180 Coffea canephora HOM05D006378 ORTHO05D007959 5.3e-20 101.3 106 51.9
Glyma.15G177600 Glycine max HOM05D006378 ORTHO05D007959 5.3e-20 101.3 106 50.0
SGA_v2.0_scaffold91G28112 Striga asiatica HOM05D006378 ORTHO05D007959 5.3e-20 101.3 103 50.5
THA.LOC104826591 Tarenaya hassleriana HOM05D006378 ORTHO05D007959 5.3e-20 101.3 111 53.2
AUR62028935 Chenopodium quinoa HOM05D006378 ORTHO05D007959 6.9e-20 100.9 106 50.0
TPR.G28586 Trifolium pratense HOM05D006378 ORTHO05D007959 6.9e-20 100.9 105 50.5
Actinidia38480 Actinidia chinensis HOM05D006378 ORTHO05D007959 9.0e-20 100.5 106 49.1
Cfa002988 Carpinus fangiana HOM05D006378 ORTHO05D007959 9.0e-20 100.5 106 49.1
Os03g0179000 Oryza sativa ssp. japonica HOM05D006378 ORTHO05D007959 9.0e-20 100.5 103 49.5
arahy.Tifrunner.gnm1.ann1.LZ43MP Arachis hypogaea HOM05D006378 ORTHO05D007959 1.2e-19 100.1 106 51.9
Gorai.010G088400 Gossypium raimondii HOM05D006378 ORTHO05D007959 1.2e-19 100.1 106 48.1
ATR0598G254 Amborella trichopoda HOM05D006378 ORTHO05D007959 1.5e-19 99.8 106 48.1
arahy.Tifrunner.gnm1.ann1.CBKZ0V Arachis hypogaea HOM05D006378 ORTHO05D007959 1.5e-19 99.8 106 51.9
Ciclev10007418m.g Citrus clementina HOM05D006378 ORTHO05D007959 1.5e-19 99.8 111 48.6
Lj6g0025012 Lotus japonicus HOM05D006378 ORTHO05D007959 1.5e-19 99.8 106 51.9
MBI19_g16222_MAGBIO Magnolia biondii HOM05D006378 ORTHO05D007959 1.5e-19 99.8 105 49.5
Prupe.7G198800 Prunus persica HOM05D006378 ORTHO05D007959 1.5e-19 99.8 106 50.9
TWI34G0472 Tripterygium wilfordii HOM05D006378 ORTHO05D007959 2.0e-19 99.4 103 51.5
Medtr2g041640 Medicago truncatula HOM05D006378 ORTHO05D007959 2.6e-19 99.0 110 50.9
Eucgr.C03264 Eucalyptus grandis HOM05D006378 ORTHO05D007959 3.4e-19 98.6 103 50.5
Eucgr.C03329 Eucalyptus grandis HOM05D006378 ORTHO05D007959 3.4e-19 98.6 103 50.5
Nitab4.5_0000343g0150 Nicotiana tabacum HOM05D006378 ORTHO05D007959 3.4e-19 98.6 106 49.1
Phvul.009G227300 Phaseolus vulgaris HOM05D006378 ORTHO05D007959 3.4e-19 98.6 111 48.6
PGR044G1219 Punica granatum HOM05D006378 ORTHO05D007959 3.4e-19 98.6 111 48.6
Sc08g0008890 Simmondsia chinensis HOM05D006378 ORTHO05D007959 3.4e-19 98.6 103 52.4
FAN26G1418 Fragaria x ananassa HOM05D006378 ORTHO05D007959 4.5e-19 98.2 103 47.6
FAN26G3001 Fragaria x ananassa HOM05D006378 ORTHO05D007959 4.5e-19 98.2 103 47.6
TAR383G0342 Trochodendron aralioides HOM05D006378 ORTHO05D007959 4.5e-19 98.2 111 48.6
Oeu035912.1 Olea europaea HOM05D006378 ORTHO05D007959 5.9e-19 97.8 106 50.9
Psat1g134280 Pisum sativum HOM05D006378 ORTHO05D007959 5.9e-19 97.8 105 50.5
CSS0003361 Camellia sinensis var. sinensis HOM05D006378 ORTHO05D007959 7.7e-19 97.4 112 50.0
CSS0014220 Camellia sinensis var. sinensis HOM05D006378 ORTHO05D007959 7.7e-19 97.4 112 50.0
MD15G1217600 Malus domestica HOM05D006378 ORTHO05D007959 7.7e-19 97.4 106 48.1
HPP92_002164 Vanilla planifolia HOM05D006378 ORTHO05D007959 7.7e-19 97.4 106 47.2
ClCG03G015080 Citrullus lanatus HOM05D006378 ORTHO05D007959 1.0e-18 97.1 104 49.0
Sed0026053 Sechium edule HOM05D006378 ORTHO05D007959 1.0e-18 97.1 107 48.6
VMungo1309G1044 Vigna mungo HOM05D006378 ORTHO05D007959 1.3e-18 96.7 111 48.6
Aa31LG2G20840 Aethionema arabicum HOM05D006378 ORTHO05D007959 1.7e-18 96.3 111 48.6
Ca_02206_v3 Cicer arietinum L. HOM05D006378 ORTHO05D007959 1.7e-18 96.3 106 50.0
HanXRQChr06g0178331 Helianthus annuus HOM05D006378 ORTHO05D007959 2.2e-18 95.9 106 47.2
FAN19G1878 Fragaria x ananassa HOM05D006378 ORTHO05D007959 2.9e-18 95.5 107 45.8
RcHm_v2.0_Chr2g0094931 Rosa chinensis HOM05D006378 ORTHO05D007959 3.8e-18 95.1 103 47.6
Hund08780 Selenicereus undatus HOM05D006378 ORTHO05D007959 3.8e-18 95.1 106 50.0
CANSAT56G1041 Cannabis sativa HOM05D006378 ORTHO05D007959 5.0e-18 94.7 106 45.3
FvH4_1g08650 Fragaria vesca HOM05D006378 ORTHO05D007959 5.0e-18 94.7 103 46.6
SalBow6G1560 Salvia bowleyana HOM05D006378 ORTHO05D007959 8.5e-18 94.0 105 49.5
PSO135G0915 Papaver somniferum HOM05D006378 ORTHO05D007959 1.1e-17 93.6 105 48.6
Sp7g06720 Schrenkiella parvula HOM05D006378 ORTHO05D007959 1.1e-17 93.6 108 50.0
EL10Ac8g19061 Beta vulgaris HOM05D006378 ORTHO05D007959 1.9e-17 92.8 107 46.7
ECA236G3597 Erigeron canadensis HOM05D006378 ORTHO05D007959 1.9e-17 92.8 109 46.8
Aqoxy7G04130 Aquilegia oxysepala HOM05D006378 ORTHO05D007959 2.5e-17 92.4 105 48.6
vmacro06342 Vaccinium macrocarpon HOM05D006378 ORTHO05D007959 4.2e-17 91.7 105 45.7
AagrBONN_evm.TU.Sc2ySwM_117.2900 Anthoceros agrestis HOM05D006378 ORTHO05D007959 5.5e-17 91.3 105 43.8
C04p44250 Brassica napus HOM05D006378 ORTHO05D007959 9.4e-17 90.5 107 47.7
Rhsim03G0227500 Rhododendron simsii HOM05D006378 ORTHO05D007959 1.6e-16 89.7 106 43.4
SEGI_03485 Sequoiadendron giganteum HOM05D006378 ORTHO05D007959 1.6e-16 89.7 108 45.4
BcaC02g09569 Brassica carinata HOM05D006378 ORTHO05D007959 2.1e-16 89.4 107 46.7
BolC4t25998H Brassica oleracea HOM05D006378 ORTHO05D007959 2.1e-16 89.4 107 46.7
BcaB06g26949 Brassica carinata HOM05D006378 ORTHO05D007959 2.7e-16 89.0 108 49.1
Mapoly0113s0055 Marchantia polymorpha HOM05D006378 ORTHO05D007959 2.7e-16 89.0 109 41.3
A04p10600 Brassica napus HOM05D006378 ORTHO05D007959 3.6e-16 88.6 107 45.8
BraA04t16723Z Brassica rapa HOM05D006378 ORTHO05D007959 3.6e-16 88.6 107 45.8
Migut.J00925 Erythranthe guttata HOM05D006378 ORTHO05D007959 6.1e-16 87.8 106 46.2
Lsat_1_v5_gn_8_86460 Lactuca sativa HOM05D006378 ORTHO05D007959 7.9e-16 87.4 107 44.9
Pp3c6_19960 Physcomitrium patens HOM05D006378 ORTHO05D007959 1.0e-15 87.0 108 40.7
Dinv42394 Davidia involucrata HOM05D006378 ORTHO05D007959 3.1e-12 75.5 109 44.0
SMO174G0008 Selaginella moellendorffii HOM05D006378 ORTHO05D007959 3.1e-12 75.5 105 36.2
CBR_g12041 Chara braunii HOM05D006378 ORTHO05D007959 8.5e-10 67.4 114 32.5
Peaxi162Scf00127g01816 Petunia axillaris HOM05D006378 ORTHO05D007959 4.2e-09 65.1 85 43.5
RcHm_v2.0_Chr2g0095101 Rosa chinensis HOM05D006378 ORTHO05D007959 5.1e-07 58.2 38 60.5


User provided reference genes

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