Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI02239 Sapria himalayana HOM05D000147 ORTHO05D365426 8.0e-42 173.3 87 100.0
Manes.16G002800 Manihot esculenta HOM05D000147 ORTHO05D005950 1.3e-07 59.7 41 63.4
CANSAT56G0204 Cannabis sativa HOM05D000070 ORTHO05D005950 1.7e-07 59.3 41 58.5
Ciclev10014675m.g Citrus clementina HOM05D000147 ORTHO05D005950 2.2e-07 58.9 41 65.9
COL.COLO4_31833 Corchorus olitorius HOM05D000070 ORTHO05D005950 1.9e-06 55.8 41 58.5
Cfa000159 Carpinus fangiana HOM05D000147 ORTHO05D005950 2.4e-06 55.5 41 61.0
Cc09_g01170 Coffea canephora HOM05D000070 ORTHO05D005950 5.4e-06 54.3 41 61.0
Eucgr.E03984 Eucalyptus grandis HOM05D000147 ORTHO05D005950 5.4e-06 54.3 42 54.8
Gohir.D06G157500 Gossypium hirsutum HOM05D000070 ORTHO05D005950 5.4e-06 54.3 41 58.5
Gorai.010G184000 Gossypium raimondii HOM05D000147 ORTHO05D005950 5.4e-06 54.3 41 58.5
Potri.004G004000 Populus trichocarpa HOM05D000147 ORTHO05D005950 5.4e-06 54.3 41 58.5
Thecc.06G228500 Theobroma cacao HOM05D000147 ORTHO05D005950 5.4e-06 54.3 41 56.1
Haze_06859 Corylus avellana HOM05D000147 ORTHO05D005950 7.1e-06 53.9 41 58.5
Sabra04G0002200 Salix brachista HOM05D000147 ORTHO05D005950 7.1e-06 53.9 41 56.1
Sc24g0000260 Simmondsia chinensis HOM05D000147 ORTHO05D005950 7.1e-06 53.9 41 51.2
Gohir.A06G151300 Gossypium hirsutum HOM05D000070 ORTHO05D005950 9.3e-06 53.5 41 58.5


User provided reference genes

Program Settings