Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI02178 Sapria himalayana HOM05D006499 ORTHO05D007874 1.3e-82 309.7 154 100.0
GSVIVG01026240001 Vitis vinifera HOM05D006499 ORTHO05D007874 3.2e-57 225.3 147 72.1
Cpa.g.sc92.93 Carica papaya HOM05D006499 ORTHO05D007874 4.4e-51 204.9 189 53.4
Prupe.1G348500 Prunus persica HOM05D006499 ORTHO05D007874 4.4e-51 204.9 189 56.1
AL6G34450 Arabidopsis lyrata HOM05D006499 ORTHO05D007874 1.7e-50 203.0 193 54.4
Haze_11761 Corylus avellana HOM05D006499 ORTHO05D007874 2.9e-50 202.2 188 54.8
Potri.003G003300 Populus trichocarpa HOM05D006499 ORTHO05D007874 6.4e-50 201.1 193 53.4
RcHm_v2.0_Chr4g0446811 Rosa chinensis HOM05D006499 ORTHO05D007874 6.4e-50 201.1 193 54.4
Rhsim05G0006600 Rhododendron simsii HOM05D006499 ORTHO05D007874 2.4e-49 199.1 188 54.3
Cfa008745 Carpinus fangiana HOM05D006499 ORTHO05D007874 3.2e-49 198.7 188 54.3
Ciclev10032745m.g Citrus clementina HOM05D006499 ORTHO05D007874 3.2e-49 198.7 197 53.8
AT5G23230 Arabidopsis thaliana HOM05D006499 ORTHO05D007874 4.1e-49 198.4 194 53.1
AT5G23220 Arabidopsis thaliana HOM05D006499 ORTHO05D007874 5.4e-49 198.0 194 52.1
CiPaw.06G061000 Carya illinoinensis HOM05D006499 ORTHO05D007874 5.4e-49 198.0 185 55.1
Thecc.02G158700 Theobroma cacao HOM05D006499 ORTHO05D007874 5.4e-49 198.0 196 53.1
Psat6g099520 Pisum sativum HOM05D006499 ORTHO05D007874 7.0e-49 197.6 193 53.9
Nn4g24968 Nelumbo nucifera HOM05D006499 ORTHO05D007874 9.2e-49 197.2 187 53.5
Cc02_g20760 Coffea canephora HOM05D006499 ORTHO05D007874 2.0e-48 196.1 192 52.6
vmacro04318 Vaccinium macrocarpon HOM05D006499 ORTHO05D007874 2.0e-48 196.1 189 53.4
Medtr1g038530 Medicago truncatula HOM05D006499 ORTHO05D007874 2.7e-48 195.7 196 52.0
Glyma.09G283200 Glycine max HOM05D006499 ORTHO05D007874 4.6e-48 194.9 196 53.6
THA.LOC104800852 Tarenaya hassleriana HOM05D006499 ORTHO05D007874 4.6e-48 194.9 195 52.8
Manes.15G079500 Manihot esculenta HOM05D006499 ORTHO05D007874 1.0e-47 193.7 200 53.0
Aqoxy3G00285 Aquilegia oxysepala HOM05D006499 ORTHO05D007874 1.7e-47 193.0 185 52.4
TPR.G29797 Trifolium pratense HOM05D006499 ORTHO05D007874 1.7e-47 193.0 198 53.5
Ca_05122_v3 Cicer arietinum L. HOM05D006499 ORTHO05D007874 2.3e-47 192.6 192 53.1
Duzib132G0016 Durio zibethinus HOM05D006499 ORTHO05D007874 2.3e-47 192.6 193 51.8
Lj2g0027544 Lotus japonicus HOM05D006499 ORTHO05D007874 2.3e-47 192.6 198 52.0
Lalb_Chr04g0258971 Lupinus albus HOM05D006499 ORTHO05D007874 3.9e-47 191.8 192 53.1
Medtr1g037830 Medicago truncatula HOM05D006499 ORTHO05D007874 3.9e-47 191.8 196 51.5
Lsat_1_v5_gn_8_80081 Lactuca sativa HOM05D006499 ORTHO05D007874 5.0e-47 191.4 187 52.9
Carub.0006s2100 Capsella rubella HOM05D006499 ORTHO05D007874 6.6e-47 191.0 194 51.5
MBI06_g20294_MAGBIO Magnolia biondii HOM05D006499 ORTHO05D007874 6.6e-47 191.0 189 52.4
CANSAT01G2706 Cannabis sativa HOM05D006499 ORTHO05D007874 1.1e-46 190.3 204 51.5
MD16G1003500 Malus domestica HOM05D006499 ORTHO05D007874 1.1e-46 190.3 183 53.0
QL03p017736 Quercus lobata HOM05D006499 ORTHO05D007874 1.5e-46 189.9 190 54.2
Thhalv10005281m.g Eutrema salsugineum HOM05D006499 ORTHO05D007874 1.9e-46 189.5 188 54.3
COL.COLO4_33044 Corchorus olitorius HOM05D006499 ORTHO05D007874 2.5e-46 189.1 196 50.5
Nitab4.5_0000069g0350 Nicotiana tabacum HOM05D006499 ORTHO05D007874 2.5e-46 189.1 191 52.4
BcaC03g18032 Brassica carinata HOM05D006499 ORTHO05D007874 3.3e-46 188.7 191 52.4
QL03p017519 Quercus lobata HOM05D006499 ORTHO05D007874 3.3e-46 188.7 190 53.7
TAR622G1217 Trochodendron aralioides HOM05D006499 ORTHO05D007874 3.3e-46 188.7 189 52.4
ECA236G1709 Erigeron canadensis HOM05D006499 ORTHO05D007874 4.3e-46 188.3 191 51.8
Nitab4.5_0004301g0030 Nicotiana tabacum HOM05D006499 ORTHO05D007874 4.3e-46 188.3 189 51.9
Sopen01g003460 Solanum pennellii HOM05D006499 ORTHO05D007874 4.3e-46 188.3 191 50.8
Gohir.A03G165200 Gossypium hirsutum HOM05D006499 ORTHO05D007874 5.6e-46 188.0 193 49.7
Gohir.D02G188400 Gossypium hirsutum HOM05D006499 ORTHO05D007874 5.6e-46 188.0 193 49.7
Gorai.005G211100 Gossypium raimondii HOM05D006499 ORTHO05D007874 5.6e-46 188.0 193 49.7
C02p60950 Brassica napus HOM05D006499 ORTHO05D007874 7.3e-46 187.6 191 52.4
BolC2t12145H Brassica oleracea HOM05D006499 ORTHO05D007874 7.3e-46 187.6 191 52.4
FAN07G1092 Fragaria x ananassa HOM05D006499 ORTHO05D007874 7.3e-46 187.6 182 53.3
A02p41090 Brassica napus HOM05D006499 ORTHO05D007874 9.5e-46 187.2 191 52.4
BraA02t09053Z Brassica rapa HOM05D006499 ORTHO05D007874 9.5e-46 187.2 191 52.4
MELO3C011747.2 Cucumis melo HOM05D000045 ORTHO05D007874 9.5e-46 187.2 187 52.9
CsaV3_5G006120 Cucumis sativus L. HOM05D000045 ORTHO05D007874 9.5e-46 187.2 184 53.8
Sp2g23920 Schrenkiella parvula HOM05D006499 ORTHO05D007874 9.5e-46 187.2 188 53.7
Solyc01g007920.2 Solanum lycopersicum HOM05D006499 ORTHO05D007874 1.2e-45 186.8 191 50.3
Phvul.003G004400 Phaseolus vulgaris HOM05D006499 ORTHO05D007874 1.6e-45 186.4 188 54.3
Actinidia13714 Actinidia chinensis HOM05D006499 ORTHO05D007874 2.1e-45 186.0 179 54.7
HPP92_005057 Vanilla planifolia HOM05D006499 ORTHO05D007874 2.1e-45 186.0 185 51.4
MSTRG.12232 Avicennia marina HOM05D006499 ORTHO05D007874 2.8e-45 185.7 187 51.9
BcaB07g29862 Brassica carinata HOM05D006499 ORTHO05D007874 2.8e-45 185.7 191 51.8
Sed0001124 Sechium edule HOM05D006499 ORTHO05D007874 2.8e-45 185.7 191 52.4
Oeu012342.1 Olea europaea HOM05D006499 ORTHO05D007874 3.6e-45 185.3 187 51.3
Lalb_Chr10g0094911 Lupinus albus HOM05D006499 ORTHO05D007874 6.2e-45 184.5 184 52.2
CARHR190310 Cardamine hirsuta HOM05D006499 ORTHO05D007874 8.1e-45 184.1 187 51.9
PGSC0003DMG400016411 Solanum tuberosum HOM05D006499 ORTHO05D007874 8.1e-45 184.1 191 50.3
ClCG02G014040 Citrullus lanatus HOM05D006499 ORTHO05D007874 1.1e-44 183.7 197 51.3
Peaxi162Scf00021g01915 Petunia axillaris HOM05D006499 ORTHO05D007874 3.1e-44 182.2 191 50.3
arahy.Tifrunner.gnm1.ann1.U0P7JC Arachis hypogaea HOM05D000717 ORTHO05D000555 4.0e-44 181.8 193 48.7
AUR62032973 Chenopodium quinoa HOM05D006499 ORTHO05D007874 6.8e-44 181.0 201 47.8
Migut.H01291 Erythranthe guttata HOM05D006499 ORTHO05D007874 1.5e-43 179.9 185 49.7
Duzib132G0405 Durio zibethinus HOM05D006499 ORTHO05D007874 1.7e-42 176.4 196 48.0
FAN12G4256 Fragaria x ananassa HOM05D006499 ORTHO05D007874 2.9e-42 175.6 179 52.0
DCAR_026894 Daucus carota HOM05D006499 ORTHO05D007874 8.3e-42 174.1 202 47.5
Lj6P712T24 Lonicera japonica HOM05D006499 ORTHO05D007874 8.3e-42 174.1 165 55.2
Lj6P717T75 Lonicera japonica HOM05D006499 ORTHO05D007874 8.3e-42 174.1 165 55.2
arahy.Tifrunner.gnm1.ann1.BULB93 Arachis hypogaea HOM05D006499 ORTHO05D007874 1.1e-41 173.7 183 49.7
ATR0618G206 Amborella trichopoda HOM05D006499 ORTHO05D007874 1.4e-41 173.3 192 50.5
SGA_v2.0_scaffold49G18416 Striga asiatica HOM05D006499 ORTHO05D007874 3.2e-41 172.2 184 49.5
EL10Ac9g22960 Beta vulgaris HOM05D006499 ORTHO05D007874 9.2e-41 170.6 202 46.5
COL.COLO4_06169 Corchorus olitorius HOM05D006499 ORTHO05D007874 1.2e-37 160.2 168 49.4
AagrBONN_evm.TU.Sc2ySwM_344.3677 Anthoceros agrestis HOM05D006499 ORTHO05D007874 1.6e-37 159.8 187 47.1
CSS0024171 Camellia sinensis var. sinensis HOM05D006499 ORTHO05D007874 2.8e-37 159.1 182 48.4
Zm00001eb076800 Zea mays HOM05D006499 ORTHO05D007874 1.1e-36 157.1 187 46.0
unitig_578.g16567 Utricularia gibba HOM05D006499 ORTHO05D007874 1.8e-36 156.4 186 43.5
SMO116G0488 Selaginella moellendorffii HOM05D006499 ORTHO05D007874 3.1e-36 155.6 182 47.3
Pp3c12_9010 Physcomitrium patens HOM05D006499 ORTHO05D007874 4.0e-36 155.2 184 45.7
Os04g0525800 Oryza sativa ssp. japonica HOM05D006499 ORTHO05D007874 7.6e-35 151.0 183 46.4
AUR62017708 Chenopodium quinoa HOM05D006499 ORTHO05D007874 3.2e-33 145.6 175 44.6
Mapoly0180s0008 Marchantia polymorpha HOM05D006499 ORTHO05D007874 1.3e-31 140.2 186 40.9
Sc06g0006830 Simmondsia chinensis HOM05D006499 ORTHO05D007874 3.0e-31 139.0 149 51.7
CBR_g16977 Chara braunii HOM05D006499 ORTHO05D007874 1.4e-25 120.2 192 37.0
Aa31LG11G2680 Aethionema arabicum HOM05D006499 ORTHO05D007874 3.2e-25 119.0 70 78.6
TAR622G0494 Trochodendron aralioides HOM05D006499 ORTHO05D007874 3.5e-24 115.5 149 45.0
CAN.G2.1 Capsicum annuum HOM05D006499 ORTHO05D007874 1.7e-23 113.2 72 72.2
PGR044G1944 Punica granatum HOM05D006499 ORTHO05D007874 1.1e-22 110.5 100 59.0
QL04p029592 Quercus lobata HOM05D006499 ORTHO05D007874 5.6e-22 108.2 69 73.9
QL05p044270 Quercus lobata HOM05D000125 ORTHO05D007874 5.6e-22 108.2 69 73.9
SEGI_40434 Sequoiadendron giganteum HOM05D006499 ORTHO05D007874 7.3e-22 107.8 67 73.1
CAN.G655.2 Capsicum annuum HOM05D006499 ORTHO05D007874 7.6e-19 97.8 70 61.4
A03p62810 Brassica napus HOM05D006499 ORTHO05D007874 4.9e-18 95.1 76 61.8
BraA03t15356Z Brassica rapa HOM05D006499 ORTHO05D007874 4.9e-18 95.1 76 61.8
Medtr1g037850 Medicago truncatula HOM05D006499 ORTHO05D007874 4.9e-18 95.1 59 72.9
BcaC03g13135 Brassica carinata HOM05D006499 ORTHO05D007874 7.1e-17 91.3 72 62.5
arahy.Tifrunner.gnm1.ann1.YHJY2A Arachis hypogaea HOM05D006499 ORTHO05D007874 3.5e-16 89.0 59 67.8
Nn5g28518 Nelumbo nucifera HOM05D006499 ORTHO05D007874 2.9e-10 69.3 52 55.8
Nn6g33750 Nelumbo nucifera HOM05D006499 ORTHO05D007874 6.0e-08 61.6 48 52.1


User provided reference genes

Program Settings