Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI02125 Sapria himalayana HOM05D006195 ORTHO05D007710 2.9e-96 355.1 172 100.0
Lj2A280G38 Lonicera japonica HOM05D006195 ORTHO05D007710 3.4e-44 182.2 101 78.2
Nitab4.5_0009994g0040 Nicotiana tabacum HOM05D006195 ORTHO05D007710 3.4e-44 182.2 123 65.9
Nitab4.5_0000190g0110 Nicotiana tabacum HOM05D006195 ORTHO05D007710 5.8e-44 181.4 100 79.0
Solyc02g079110.3 Solanum lycopersicum HOM05D006195 ORTHO05D007710 1.3e-43 180.3 123 65.0
Sopen02g023920 Solanum pennellii HOM05D006195 ORTHO05D007710 1.3e-43 180.3 123 65.0
PGSC0003DMG400022408 Solanum tuberosum HOM05D006195 ORTHO05D007710 1.3e-43 180.3 123 65.0
TWI38G0511 Tripterygium wilfordii HOM05D006195 ORTHO05D007710 1.7e-43 179.9 106 73.6
QL04p018330 Quercus lobata HOM05D006195 ORTHO05D007710 2.2e-43 179.5 123 64.2
CANSAT56G3748 Cannabis sativa HOM05D006195 ORTHO05D007710 2.9e-43 179.1 123 65.9
Gohir.A05G165600 Gossypium hirsutum HOM05D006195 ORTHO05D007710 2.9e-43 179.1 106 73.6
Gohir.D05G168600 Gossypium hirsutum HOM05D006195 ORTHO05D007710 2.9e-43 179.1 106 73.6
Gorai.009G173800 Gossypium raimondii HOM05D006195 ORTHO05D007710 2.9e-43 179.1 106 73.6
Prupe.4G036600 Prunus persica HOM05D006195 ORTHO05D007710 2.9e-43 179.1 101 76.2
Eucgr.E03701 Eucalyptus grandis HOM05D006195 ORTHO05D007710 3.8e-43 178.7 101 79.2
Lsat_1_v5_gn_7_19641 Lactuca sativa HOM05D006195 ORTHO05D007710 3.8e-43 178.7 123 65.0
Potri.011G043000 Populus trichocarpa HOM05D006195 ORTHO05D007710 3.8e-43 178.7 101 76.2
GSVIVG01003194001 Vitis vinifera HOM05D006195 ORTHO05D007710 3.8e-43 178.7 101 77.2
TAR629G3096 Trochodendron aralioides HOM05D006195 ORTHO05D007710 4.9e-43 178.3 101 76.2
CiPaw.09G158100 Carya illinoinensis HOM05D006195 ORTHO05D007710 6.4e-43 177.9 123 65.0
ClCG03G005530 Citrullus lanatus HOM05D006195 ORTHO05D007710 6.4e-43 177.9 123 65.0
CsaV3_1G011800 Cucumis sativus L. HOM05D006195 ORTHO05D007710 6.4e-43 177.9 123 65.0
Oeu038214.1 Olea europaea HOM05D006195 ORTHO05D007710 8.4e-43 177.6 123 66.7
Sed0022279 Sechium edule HOM05D006195 ORTHO05D007710 8.4e-43 177.6 123 64.2
Cfa000355 Carpinus fangiana HOM05D006195 ORTHO05D007710 1.4e-42 176.8 125 64.8
COL.COLO4_31584 Corchorus olitorius HOM05D006195 ORTHO05D007710 1.4e-42 176.8 106 75.5
HanXRQChr14g0437281 Helianthus annuus HOM05D006195 ORTHO05D007710 1.9e-42 176.4 101 76.2
Sabra11G0029600 Salix brachista HOM05D006195 ORTHO05D001726 1.9e-42 176.4 101 75.2
ECA236G2696 Erigeron canadensis HOM05D006195 ORTHO05D007710 2.4e-42 176.0 101 75.2
PSO675G1294 Papaver somniferum HOM05D006195 ORTHO05D007710 2.4e-42 176.0 123 64.2
Thecc.06G199000 Theobroma cacao HOM05D006195 ORTHO05D007710 2.4e-42 176.0 106 72.6
Cc02_g12450 Coffea canephora HOM05D006195 ORTHO05D007710 3.2e-42 175.6 123 65.0
Actinidia24060 Actinidia chinensis HOM05D006195 ORTHO05D007710 4.2e-42 175.3 101 77.2
Cpa.g.sc27.120 Carica papaya HOM05D006195 ORTHO05D007710 4.2e-42 175.3 101 75.2
MD10G1303200 Malus domestica HOM05D006195 ORTHO05D007710 4.2e-42 175.3 101 74.3
SalBow1G5137 Salvia bowleyana HOM05D006195 ORTHO05D007710 5.5e-42 174.9 104 76.9
SalBow6G2099 Salvia bowleyana HOM05D006195 ORTHO05D007710 5.5e-42 174.9 104 76.9
SalBow6G4337 Salvia bowleyana HOM05D006195 ORTHO05D007710 5.5e-42 174.9 104 76.9
Atru.chr10.2006 Acer truncatum HOM05D006195 ORTHO05D007710 7.1e-42 174.5 101 73.3
Ah.14g088920 Amaranthus hybridus HOM05D006195 ORTHO05D007710 9.3e-42 174.1 128 63.3
SalBow8G2471 Salvia bowleyana HOM05D006195 ORTHO05D007710 1.2e-41 173.7 101 77.2
Sc17g0006620 Simmondsia chinensis HOM05D006195 ORTHO05D007710 1.2e-41 173.7 123 65.9
FAN21G3429 Fragaria x ananassa HOM05D006195 ORTHO05D007710 1.6e-41 173.3 126 61.1
RcHm_v2.0_Chr5g0006371 Rosa chinensis HOM05D006195 ORTHO05D007710 1.6e-41 173.3 123 63.4
vmacro15867 Vaccinium macrocarpon HOM05D006195 ORTHO05D007710 2.1e-41 172.9 101 75.2
Aqoxy1G02740 Aquilegia oxysepala HOM05D006195 ORTHO05D007710 3.5e-41 172.2 123 62.6
Dinv40483 Davidia involucrata HOM05D006195 ORTHO05D007710 3.5e-41 172.2 101 73.3
Lj4g0017156 Lotus japonicus HOM05D006195 ORTHO05D007710 3.5e-41 172.2 123 64.2
Ca_18483_v3 Cicer arietinum L. HOM05D006195 ORTHO05D007710 4.6e-41 171.8 123 65.0
Ciclev10015313m.g Citrus clementina HOM05D006195 ORTHO05D007710 4.6e-41 171.8 101 73.3
MELO3C002557.2 Cucumis melo HOM05D006195 ORTHO05D007710 4.6e-41 171.8 104 75.0
MBI14_g13652_MAGBIO Magnolia biondii HOM05D006195 ORTHO05D007710 4.6e-41 171.8 101 73.3
MBI14_g15641_MAGBIO Magnolia biondii HOM05D006195 ORTHO05D007710 4.6e-41 171.8 123 62.6
EL10Ac8g20527 Beta vulgaris HOM05D006195 ORTHO05D007710 6.0e-41 171.4 128 63.3
MD05G1325300 Malus domestica HOM05D006195 ORTHO05D007710 1.0e-40 170.6 120 63.3
Migut.I00196 Erythranthe guttata HOM05D006195 ORTHO05D007710 1.3e-40 170.2 101 75.2
DCAR_008069 Daucus carota HOM05D006195 ORTHO05D007710 1.8e-40 169.9 101 74.3
Migut.M01211 Erythranthe guttata HOM05D006195 ORTHO05D007710 1.8e-40 169.9 101 75.2
Lalb_Chr09g0327371 Lupinus albus HOM05D006195 ORTHO05D007710 1.8e-40 169.9 128 62.5
Rhsim02G0120000 Rhododendron simsii HOM05D006195 ORTHO05D007710 1.8e-40 169.9 101 74.3
AUR62014719 Chenopodium quinoa HOM05D006195 ORTHO05D007710 2.3e-40 169.5 137 56.2
FvH4_3g04030 Fragaria vesca HOM05D006195 ORTHO05D007710 2.3e-40 169.5 101 71.3
FAN11G1039 Fragaria x ananassa HOM05D006195 ORTHO05D007710 2.3e-40 169.5 101 71.3
Medtr4g091080 Medicago truncatula HOM05D006195 ORTHO05D007710 3.0e-40 169.1 123 64.2
AT4G21520 Arabidopsis thaliana HOM05D006195 ORTHO05D007710 3.9e-40 168.7 101 74.3
Potri.004G034600 Populus trichocarpa HOM05D006195 ORTHO05D007710 5.1e-40 168.3 101 72.3
AL7G32530 Arabidopsis lyrata HOM05D006195 ORTHO05D007710 6.7e-40 167.9 101 74.3
BcaNung02791 Brassica carinata HOM05D006195 ORTHO05D007710 6.7e-40 167.9 101 74.3
Peaxi162Scf00355g00914 Petunia axillaris HOM05D006195 ORTHO05D007710 6.7e-40 167.9 137 58.4
Sp7g19630 Schrenkiella parvula HOM05D006195 ORTHO05D007710 6.7e-40 167.9 101 74.3
TPR.G32422 Trifolium pratense HOM05D006195 ORTHO05D007710 6.7e-40 167.9 123 63.4
CARHR228180 Cardamine hirsuta HOM05D006195 ORTHO05D007710 8.7e-40 167.5 101 73.3
Hund23609 Selenicereus undatus HOM05D006195 ORTHO05D007710 8.7e-40 167.5 128 60.2
Thhalv10025271m.g Eutrema salsugineum HOM05D006195 ORTHO05D007710 1.1e-39 167.2 101 74.3
arahy.Tifrunner.gnm1.ann1.IWY5CJ Arachis hypogaea HOM05D006195 ORTHO05D007710 1.5e-39 166.8 123 62.6
Phvul.002G222200 Phaseolus vulgaris HOM05D006195 ORTHO05D007710 1.9e-39 166.4 123 63.4
Carub.0007s1990 Capsella rubella HOM05D006195 ORTHO05D007710 3.3e-39 165.6 101 72.3
PGR042G1193 Punica granatum HOM05D006195 ORTHO05D007710 3.3e-39 165.6 101 69.3
SGA_v2.0_scaffold7G03951 Striga asiatica HOM05D006195 ORTHO05D007710 3.3e-39 165.6 101 72.3
Manes.10G084901 Manihot esculenta HOM05D006195 ORTHO05D007710 4.3e-39 165.2 91 76.9
Aa31LG6G3540 Aethionema arabicum HOM05D006195 ORTHO05D007710 5.6e-39 164.9 101 72.3
Haze_06571 Corylus avellana HOM05D006195 ORTHO05D007710 5.6e-39 164.9 130 60.8
Glyma.07G190200 Glycine max HOM05D006195 ORTHO05D007710 7.4e-39 164.5 123 63.4
THA.LOC104806275 Tarenaya hassleriana HOM05D006195 ORTHO05D007710 7.4e-39 164.5 101 70.3
arahy.Tifrunner.gnm1.ann1.HDHM3Z Arachis hypogaea HOM05D006195 ORTHO05D007710 9.6e-39 164.1 123 61.0
Manes.17G039200 Manihot esculenta HOM05D006195 ORTHO05D007710 9.6e-39 164.1 90 77.8
Psat7g108560 Pisum sativum HOM05D006195 ORTHO05D007710 1.3e-38 163.7 124 63.7
VMungo0251G2515 Vigna mungo HOM05D006195 ORTHO05D007710 2.1e-38 162.9 128 61.7
TPR.G37128 Trifolium pratense HOM05D006195 ORTHO05D007710 2.8e-38 162.5 124 61.3
CSS0049192 Camellia sinensis var. sinensis HOM05D006195 ORTHO05D007710 3.7e-38 162.2 101 72.3
MSTRG.8639 Avicennia marina HOM05D006195 ORTHO05D007710 4.8e-38 161.8 101 71.3
BraA01t01227Z Brassica rapa HOM05D006195 ORTHO05D007710 4.8e-38 161.8 103 71.8
C01p15450 Brassica napus HOM05D006195 ORTHO05D007710 6.2e-38 161.4 102 72.5
BolC1t01499H Brassica oleracea HOM05D006195 ORTHO05D007710 6.2e-38 161.4 102 72.5
ATR0693G097 Amborella trichopoda HOM05D006195 ORTHO05D007710 8.2e-38 161.0 123 60.2
A01p12830 Brassica napus HOM05D006195 ORTHO05D007710 1.4e-37 160.2 102 71.6
FAN25G3765 Fragaria x ananassa HOM05D006195 ORTHO05D007710 2.0e-36 156.4 105 66.7
Duzib235G1322 Durio zibethinus HOM05D006195 ORTHO05D007710 5.5e-34 148.3 85 71.8
AagrBONN_evm.TU.Sc2ySwM_344.4192 Anthoceros agrestis HOM05D006195 ORTHO05D007710 1.6e-33 146.7 123 55.3
Mapoly0082s0056 Marchantia polymorpha HOM05D006195 ORTHO05D007710 1.8e-32 143.3 106 60.4
Os03g0738000 Oryza sativa ssp. japonica HOM05D006195 ORTHO05D007710 3.0e-32 142.5 101 67.3
CDE11G0466 Ceratophyllum demersum HOM05D006195 ORTHO05D007710 5.1e-32 141.7 123 55.3
CBR_g41455 Chara braunii HOM05D006195 ORTHO05D007710 6.7e-32 141.4 101 65.3
CBR_g20417 Chara braunii HOM05D006195 ORTHO05D007710 4.3e-31 138.7 101 63.4
Pp3c6_22670 Physcomitrium patens HOM05D006195 ORTHO05D007710 5.7e-31 138.3 123 51.2
Zm00001eb056530 Zea mays HOM05D006195 ORTHO05D007710 5.7e-31 138.3 101 65.3
SMO137G0351 Selaginella moellendorffii HOM05D006195 ORTHO05D007710 3.7e-30 135.6 101 61.4
unitig_37.g12337 Utricularia gibba HOM05D006195 ORTHO05D007710 3.4e-28 129.0 84 69.0
SMO116G0485 Selaginella moellendorffii HOM05D006195 ORTHO05D007710 4.5e-28 128.6 98 60.2
Eucgr.L01396 Eucalyptus grandis HOM05D006195 ORTHO05D007710 1.3e-24 117.1 70 74.3
AUR62016899 Chenopodium quinoa HOM05D006195 ORTHO05D007710 1.8e-24 116.7 124 47.6
HPP92_018057 Vanilla planifolia HOM05D006195 ORTHO05D007710 1.1e-18 97.4 75 60.0
SalBow1G7985 Salvia bowleyana HOM05D006195 ORTHO05D007710 1.6e-17 93.6 50 82.0
Cre07.g326350 Chlamydomonas reinhardtii HOM05D006195 ORTHO05D007710 3.7e-14 82.4 101 43.6
MCO07G204 Micromonas commoda HOM05D006195 ORTHO05D007710 1.5e-12 77.0 121 38.0
PRCOL_00004057 Prasinoderma coloniale HOM05D006195 ORTHO05D007710 2.9e-11 72.8 106 35.8
SalBow4G2205 Salvia bowleyana HOM05D006195 ORTHO05D007710 2.1e-09 66.6 32 90.6
Nitab4.5_0003834g0010 Nicotiana tabacum HOM05D006195 ORTHO05D007710 3.6e-09 65.9 59 49.2
Dinv18994 Davidia involucrata HOM05D006195 ORTHO05D007710 2.6e-07 59.7 59 45.8


User provided reference genes

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