Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI01876 Sapria himalayana HOM05D005665 ORTHO05D007230 6.5e-215 750.4 358 100.0
Manes.16G026000 Manihot esculenta HOM05D005665 ORTHO05D007230 2.3e-159 565.8 352 76.4
ClCG03G005940 Citrullus lanatus HOM05D005665 ORTHO05D007230 1.2e-155 553.5 344 75.9
CANSAT35G1141 Cannabis sativa HOM05D005665 ORTHO05D007230 1.5e-155 553.1 346 77.2
CiPaw.09G058000 Carya illinoinensis HOM05D005665 ORTHO05D007230 1.5e-155 553.1 338 76.9
Manes.17G043900 Manihot esculenta HOM05D005665 ORTHO05D007230 1.5e-155 553.1 357 74.2
Lalb_Chr18g0059701 Lupinus albus HOM05D005665 ORTHO05D007230 4.5e-155 551.6 348 76.7
MD10G1295900 Malus domestica HOM05D005665 ORTHO05D007230 1.3e-154 550.1 345 75.4
QL05p039803 Quercus lobata HOM05D005665 ORTHO05D007230 1.3e-154 550.1 357 73.9
Aqoxy4G01024 Aquilegia oxysepala HOM05D005665 ORTHO05D007230 1.7e-154 549.7 345 74.8
TWI38G1053 Tripterygium wilfordii HOM05D005665 ORTHO05D007230 1.7e-154 549.7 350 74.9
CsaV3_1G012180 Cucumis sativus L. HOM05D005665 ORTHO05D007230 2.9e-154 548.9 344 75.3
Cpa.g.sc27.60 Carica papaya HOM05D005665 ORTHO05D007230 8.4e-154 547.4 346 74.6
Ciclev10015896m.g Citrus clementina HOM05D005665 ORTHO05D007230 1.1e-153 547.0 352 73.9
Carub.0006s3285 Capsella rubella HOM05D005665 ORTHO05D007230 1.4e-153 546.6 346 74.3
MELO3C002591.2 Cucumis melo HOM05D005665 ORTHO05D007230 1.4e-153 546.6 344 74.7
Dinv07542 Davidia involucrata HOM05D005665 ORTHO05D007230 1.4e-153 546.6 347 76.4
Peaxi162Scf00461g00010 Petunia axillaris HOM05D005665 ORTHO05D007230 1.9e-153 546.2 350 74.6
Actinidia05618 Actinidia chinensis HOM05D005665 ORTHO05D007230 2.4e-153 545.8 336 77.1
Potri.011G050800 Populus trichocarpa HOM05D005665 ORTHO05D007230 2.4e-153 545.8 350 74.0
Duzib192G0757 Durio zibethinus HOM05D005665 ORTHO05D007230 4.2e-153 545.0 346 75.4
FAN21G3875 Fragaria x ananassa HOM05D005665 ORTHO05D007230 4.2e-153 545.0 345 74.5
THA.LOC104806290 Tarenaya hassleriana HOM05D005665 ORTHO05D007230 4.2e-153 545.0 344 74.1
CiPaw.10G047200 Carya illinoinensis HOM05D005665 ORTHO05D007230 5.5e-153 544.7 342 75.1
TPR.G36824 Trifolium pratense HOM05D005665 ORTHO05D007230 5.5e-153 544.7 338 76.6
FAN25G3768 Fragaria x ananassa HOM05D005665 ORTHO05D007230 7.1e-153 544.3 345 74.5
Solyc10g009030.4 Solanum lycopersicum HOM05D005665 ORTHO05D007230 7.1e-153 544.3 352 74.7
Cfa000422 Carpinus fangiana HOM05D005665 ORTHO05D007230 9.3e-153 543.9 336 75.9
Peaxi162Scf00530g00218 Petunia axillaris HOM05D005665 ORTHO05D007230 1.2e-152 543.5 351 74.9
Gohir.A06G126400 Gossypium hirsutum HOM05D005665 ORTHO05D007230 1.6e-152 543.1 346 73.7
Sopen10g004810 Solanum pennellii HOM05D005665 ORTHO05D007230 1.6e-152 543.1 352 74.7
Prupe.4G044600 Prunus persica HOM05D005665 ORTHO05D007230 2.1e-152 542.7 346 74.9
FAN16G3723 Fragaria x ananassa HOM05D005665 ORTHO05D007230 2.7e-152 542.3 345 74.5
Gohir.D06G131200 Gossypium hirsutum HOM05D005665 ORTHO05D007230 2.7e-152 542.3 346 73.4
PGSC0003DMG400022827 Solanum tuberosum HOM05D005665 ORTHO05D007230 2.7e-152 542.3 352 74.7
Lj6g0021271 Lotus japonicus HOM05D005665 ORTHO05D007230 3.5e-152 542.0 337 77.4
PSO210G3809 Papaver somniferum HOM05D005665 ORTHO05D007230 3.5e-152 542.0 336 75.9
PSO832G3519 Papaver somniferum HOM05D005665 ORTHO05D007230 3.5e-152 542.0 336 75.9
THA.LOC104812890 Tarenaya hassleriana HOM05D005665 ORTHO05D007230 3.5e-152 542.0 351 72.9
AT4G04930 Arabidopsis thaliana HOM05D005665 ORTHO05D007230 4.6e-152 541.6 336 75.6
FvH4_3g04930 Fragaria vesca HOM05D005665 ORTHO05D007230 4.6e-152 541.6 345 74.2
FAN11G2254 Fragaria x ananassa HOM05D005665 ORTHO05D007230 4.6e-152 541.6 345 74.2
Nitab4.5_0013250g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 4.6e-152 541.6 352 74.7
Ca_00306_v3 Cicer arietinum L. HOM05D005665 ORTHO05D007230 6.0e-152 541.2 330 77.3
PGR042G0011 Punica granatum HOM05D005665 ORTHO05D007230 6.0e-152 541.2 354 73.4
Sabra11G0034800 Salix brachista HOM05D005665 ORTHO05D007230 7.9e-152 540.8 350 73.1
Thecc.06G190100 Theobroma cacao HOM05D005665 ORTHO05D007230 7.9e-152 540.8 346 74.0
CSS0000582 Camellia sinensis var. sinensis HOM05D005665 ORTHO05D007230 1.0e-151 540.4 336 75.0
Medtr2g013070 Medicago truncatula HOM05D005665 ORTHO05D007230 1.0e-151 540.4 334 76.6
RcHm_v2.0_Chr5g0008091 Rosa chinensis HOM05D005665 ORTHO05D007230 1.0e-151 540.4 348 74.1
Sed0027057 Sechium edule HOM05D005665 ORTHO05D007230 1.0e-151 540.4 332 75.9
Atru.chr10.1913 Acer truncatum HOM05D005665 ORTHO05D007230 1.8e-151 539.7 342 74.0
Nn1g06596 Nelumbo nucifera HOM05D005665 ORTHO05D007230 1.8e-151 539.7 346 74.0
Nitab4.5_0003942g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 1.8e-151 539.7 352 73.9
Sp6g04030 Schrenkiella parvula HOM05D005665 ORTHO05D007230 1.8e-151 539.7 356 71.6
SpUn0051_0010 Schrenkiella parvula HOM05D005665 ORTHO05D007230 1.8e-151 539.7 356 71.6
A09p25970 Brassica napus HOM05D005665 ORTHO05D007230 2.3e-151 539.3 354 71.8
BraA09t38164Z Brassica rapa HOM05D005665 ORTHO05D007230 2.3e-151 539.3 354 71.8
Gorai.010G153100 Gossypium raimondii HOM05D005665 ORTHO05D007230 3.9e-151 538.5 337 74.5
Hma1.2p1_0126F.1_g059290 Hydrangea macrophylla HOM05D005665 ORTHO05D007230 3.9e-151 538.5 343 75.5
Nitab4.5_0005615g0050 Nicotiana tabacum HOM05D005665 ORTHO05D007230 3.9e-151 538.5 351 74.1
TAR627G0371 Trochodendron aralioides HOM05D005665 ORTHO05D007230 5.1e-151 538.1 344 75.9
ClCG01G022870 Citrullus lanatus HOM05D005665 ORTHO05D007230 8.7e-151 537.3 336 75.0
TAR626G1890 Trochodendron aralioides HOM05D005665 ORTHO05D007230 8.7e-151 537.3 347 75.2
Eucgr.E03124 Eucalyptus grandis HOM05D005665 ORTHO05D007230 1.9e-150 536.2 347 73.8
Lj2A287T49 Lonicera japonica HOM05D005665 ORTHO05D007230 1.9e-150 536.2 343 74.6
BolC9t56129H Brassica oleracea HOM05D005665 ORTHO05D007230 2.5e-150 535.8 352 71.3
Thhalv10028789m.g Eutrema salsugineum HOM05D005665 ORTHO05D007230 2.5e-150 535.8 342 72.5
Nn1g04043 Nelumbo nucifera HOM05D005665 ORTHO05D007230 2.5e-150 535.8 330 77.0
Psat1g206640 Pisum sativum HOM05D005665 ORTHO05D007230 2.5e-150 535.8 339 75.8
Actinidia01890 Actinidia chinensis HOM05D005665 ORTHO05D007230 7.4e-150 534.3 342 74.6
Duzib160G0567 Durio zibethinus HOM05D005665 ORTHO05D007230 9.6e-150 533.9 345 73.3
Migut.M01155 Erythranthe guttata HOM05D005665 ORTHO05D007230 9.6e-150 533.9 353 73.7
SalBow7G1156 Salvia bowleyana HOM05D005665 ORTHO05D007230 9.6e-150 533.9 335 76.4
Haze_06494 Corylus avellana HOM05D005665 ORTHO05D007230 1.3e-149 533.5 373 68.9
AUR62014800 Chenopodium quinoa HOM05D005665 ORTHO05D007230 1.6e-149 533.1 336 74.1
Sed0024618 Sechium edule HOM05D005665 ORTHO05D007230 2.1e-149 532.7 344 73.0
GSVIVG01002020001 Vitis vinifera HOM05D005665 ORTHO05D007230 2.1e-149 532.7 340 74.7
AUR62016991 Chenopodium quinoa HOM05D005665 ORTHO05D007230 3.7e-149 531.9 336 73.8
Cc02_g13170 Coffea canephora HOM05D005665 ORTHO05D007230 4.8e-149 531.6 335 74.6
Nitab4.5_0004775g0030 Nicotiana tabacum HOM05D005665 ORTHO05D007230 6.2e-149 531.2 347 73.2
Sc05g0007780 Simmondsia chinensis HOM05D005665 ORTHO05D007230 6.2e-149 531.2 336 74.7
BcaC04g21346 Brassica carinata HOM05D005665 ORTHO05D007230 1.1e-148 530.4 352 70.5
C09p32940 Brassica napus HOM05D005665 ORTHO05D007230 1.1e-148 530.4 352 70.5
SGA_v2.0_scaffold22G09724 Striga asiatica HOM05D005665 ORTHO05D007230 1.4e-148 530.0 345 73.6
VMungo0540G1872 Vigna mungo HOM05D005665 ORTHO05D007230 1.8e-148 529.6 336 74.7
Os02g0639600 Oryza sativa ssp. japonica HOM05D005665 ORTHO05D007230 3.1e-148 528.9 343 73.5
Glyma.15G072800 Glycine max HOM05D005665 ORTHO05D007230 6.9e-148 527.7 337 74.8
MSTRG.7328 Avicennia marina HOM05D005665 ORTHO05D007230 1.2e-147 526.9 335 74.3
EL10Ac8g20360 Beta vulgaris HOM05D005665 ORTHO05D007230 1.5e-147 526.6 336 73.8
BcaB01g01848 Brassica carinata HOM05D005665 ORTHO05D007230 5.8e-147 524.6 344 72.1
Phvul.006G187100 Phaseolus vulgaris HOM05D005665 ORTHO05D007230 1.0e-146 523.9 335 74.0
Gohir.A10G024500 Gossypium hirsutum HOM05D005665 ORTHO05D007230 1.3e-146 523.5 345 71.6
Gorai.011G026500 Gossypium raimondii HOM05D005665 ORTHO05D007230 1.7e-146 523.1 345 71.9
Gohir.D10G025200 Gossypium hirsutum HOM05D005665 ORTHO05D007230 4.9e-146 521.5 337 73.3
COL.COLO4_31496 Corchorus olitorius HOM05D005665 ORTHO05D007230 6.5e-146 521.2 319 77.1
Zm00001eb075800 Zea mays HOM05D005665 ORTHO05D007230 1.1e-145 520.4 336 72.3
Oeu053967.2 Olea europaea HOM05D005665 ORTHO05D007230 1.4e-145 520.0 358 70.9
ATR0680G322 Amborella trichopoda HOM05D005665 ORTHO05D007230 7.1e-145 517.7 336 72.3
Aa31LG9G9560 Aethionema arabicum HOM05D005665 ORTHO05D007230 7.9e-144 514.2 349 69.9
arahy.Tifrunner.gnm1.ann1.5IXZ6F Arachis hypogaea HOM05D005665 ORTHO05D007230 7.9e-144 514.2 351 71.2
arahy.Tifrunner.gnm1.ann1.C923ZL Arachis hypogaea HOM05D005665 ORTHO05D007230 2.3e-143 512.7 351 70.9
Glyma.13G240700 Glycine max HOM05D005665 ORTHO05D007230 3.9e-143 511.9 337 72.1
MBI18_g16999_MAGBIO Magnolia biondii HOM05D005665 ORTHO05D007230 2.5e-142 509.2 336 72.6
Ah.09g237240 Amaranthus hybridus HOM05D005665 ORTHO05D007230 6.9e-140 501.1 331 71.9
Lsat_1_v5_gn_1_126041 Lactuca sativa HOM05D005665 ORTHO05D007230 1.8e-132 476.5 337 66.5
CDE01G0218 Ceratophyllum demersum HOM05D005098 ORTHO05D006646 6.9e-132 474.6 326 67.2
HPP92_021012 Vanilla planifolia HOM05D005665 ORTHO05D007230 2.0e-131 473.0 355 64.8
SEGI_10058 Sequoiadendron giganteum HOM05D005665 ORTHO05D007230 3.8e-130 468.8 330 66.7
Eucgr.L02776 Eucalyptus grandis HOM05D005665 ORTHO05D007230 1.4e-129 466.8 301 74.1
Mapoly0083s0054 Marchantia polymorpha HOM05D005665 ORTHO05D007230 1.9e-129 466.5 334 66.5
CAN.G413.22 Capsicum annuum HOM05D005665 ORTHO05D007230 3.2e-129 465.7 274 79.2
Nitab4.5_0002158g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 2.7e-128 462.6 327 70.3
RhsimUnG0044900 Rhododendron simsii HOM05D005665 ORTHO05D007230 1.4e-127 460.3 279 76.7
MD05G1314600 Malus domestica HOM05D005665 ORTHO05D007230 7.4e-126 454.5 335 65.7
SMO364G0702 Selaginella moellendorffii HOM05D005665 ORTHO05D007230 5.0e-122 441.8 330 61.8
DCAR_004082 Daucus carota HOM05D005665 ORTHO05D007230 6.1e-120 434.9 250 80.4
AagrBONN_evm.TU.Sc2ySwM_344.2491 Anthoceros agrestis HOM05D005665 ORTHO05D007230 8.0e-120 434.5 327 61.8
Pp3c23_19370 Physcomitrium patens HOM05D005665 ORTHO05D007230 1.8e-116 423.3 360 58.6
Pp3c23_19371 Physcomitrium patens HOM05D005665 ORTHO05D007230 1.8e-116 423.3 360 58.6
AagrBONN_evm.TU.Sc2ySwM_344.2084 Anthoceros agrestis HOM05D005665 ORTHO05D007230 9.1e-108 394.4 329 55.9
CSS0037689 Camellia sinensis var. sinensis HOM05D005665 ORTHO05D007230 1.5e-102 377.1 250 74.0
MCO04G319 Micromonas commoda HOM05D005665 ORTHO05D007230 2.6e-94 349.7 351 50.1
CDE02G1299 Ceratophyllum demersum HOM05D005665 ORTHO05D007230 7.8e-91 338.2 282 58.5
unitig_21.g20852 Utricularia gibba HOM05D005665 ORTHO05D007230 1.1e-84 317.8 237 65.4
PRCOL_00001033 Prasinoderma coloniale HOM05D005665 ORTHO05D007230 5.0e-82 308.9 336 44.3
Cfa021982 Carpinus fangiana HOM05D005665 ORTHO05D007230 8.3e-77 291.6 366 41.3
Haze_26717 Corylus avellana HOM05D005665 ORTHO05D007230 1.0e-66 258.1 382 38.0
Thecc.05G195100 Theobroma cacao HOM05D005665 ORTHO05D007230 4.6e-51 206.1 123 73.2
MELO3C007292.2 Cucumis melo HOM05D005665 ORTHO05D039877 2.8e-24 117.1 111 55.9
Dinv40542 Davidia involucrata HOM05D005665 ORTHO05D007230 4.8e-24 116.3 104 59.6
TAR629G1936 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.5e-22 111.3 83 68.7
BcaB05g23333 Brassica carinata HOM05D005665 ORTHO05D039877 2.3e-18 97.4 66 68.2
DCAR_004083 Daucus carota HOM05D000799 ORTHO05D000629 1.5e-14 84.7 51 70.6
Zm00001eb175420 Zea mays HOM05D005665 ORTHO05D007230 5.0e-13 79.7 49 71.4
Zm00001eb423550 Zea mays HOM05D005665 ORTHO05D007230 4.2e-12 76.6 41 78.0
Thecc.05G194800 Theobroma cacao HOM05D005665 ORTHO05D007230 4.8e-08 63.2 44 63.6
SEGI_41581 Sequoiadendron giganteum HOM05D005665 ORTHO05D007230 1.1e-07 62.0 55 54.5


User provided reference genes

Program Settings