Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI01818 Sapria himalayana HOM05D003782 ORTHO05D004361 2.2e-274 948.3 485 100.0
Potri.011G049300 Populus trichocarpa HOM05D003782 ORTHO05D004361 2.4e-87 327.0 493 45.0
Manes.17G043000 Manihot esculenta HOM05D003782 ORTHO05D004361 4.7e-83 312.8 483 44.3
Sabra11G0033700 Salix brachista HOM05D003782 ORTHO05D004361 8.1e-83 312.0 471 45.2
Potri.004G039900 Populus trichocarpa HOM05D003782 ORTHO05D004361 8.9e-82 308.5 460 45.7
Manes.16G025200 Manihot esculenta HOM05D003782 ORTHO05D004361 1.2e-81 308.1 474 44.5
Sabra04G0024600 Salix brachista HOM05D003782 ORTHO05D004361 8.6e-77 292.0 468 44.2
Dinv07533 Davidia involucrata HOM05D003782 ORTHO05D004361 2.1e-75 287.3 487 43.7
Cfa000411 Carpinus fangiana HOM05D003782 ORTHO05D004361 6.2e-75 285.8 464 43.3
Thecc.06G191300 Theobroma cacao HOM05D003782 ORTHO05D004361 8.1e-75 285.4 474 42.0
GSVIVG01006449001 Vitis vinifera HOM05D003782 ORTHO05D004361 1.5e-73 281.2 460 42.6
Ciclev10014178m.g Citrus clementina HOM05D003782 ORTHO05D004361 2.6e-73 280.4 479 41.3
Haze_06504 Corylus avellana HOM05D003782 ORTHO05D004361 3.4e-73 280.0 464 42.9
Cpa.g.sc27.74 Carica papaya HOM05D003782 ORTHO05D004361 2.9e-72 276.9 482 41.1
COL.COLO4_31507 Corchorus olitorius HOM05D003782 ORTHO05D004361 1.4e-71 274.6 474 41.4
QL05p039400 Quercus lobata HOM05D003782 ORTHO05D004361 1.4e-71 274.6 474 42.2
Gohir.D06G130600 Gossypium hirsutum HOM05D003782 ORTHO05D004361 1.9e-71 274.2 476 41.2
TWI38G1173 Tripterygium wilfordii HOM05D003782 ORTHO05D004361 4.2e-71 273.1 465 43.7
Gorai.010G152400 Gossypium raimondii HOM05D003782 ORTHO05D004361 7.1e-71 272.3 476 41.0
Duzib160G0524 Durio zibethinus HOM05D003782 ORTHO05D004361 9.2e-71 271.9 471 41.4
Atru.chr10.1947 Acer truncatum HOM05D003782 ORTHO05D004361 2.7e-70 270.4 480 42.5
CSS0005863 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 6.0e-70 269.2 473 41.0
CSS0007425 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 6.0e-70 269.2 473 41.0
Gohir.A06G125300 Gossypium hirsutum HOM05D003782 ORTHO05D004361 6.0e-70 269.2 473 40.4
RhsimUnG0044200 Rhododendron simsii HOM05D003782 ORTHO05D004361 6.0e-70 269.2 479 41.3
Prupe.4G043300 Prunus persica HOM05D003782 ORTHO05D004361 7.8e-70 268.9 481 41.4
Hma1.2p1_0881F.1_g231940 Hydrangea macrophylla HOM05D003782 ORTHO05D004361 1.0e-69 268.5 486 40.3
Sed0005800 Sechium edule HOM05D003782 ORTHO05D004361 2.3e-69 267.3 470 41.1
VMungo0251G3691 Vigna mungo HOM05D003782 ORTHO05D004361 8.7e-69 265.4 453 39.1
TPR.G12054 Trifolium pratense HOM05D003782 ORTHO05D004361 1.1e-68 265.0 452 40.5
MD10G1297100 Malus domestica HOM05D003782 ORTHO05D004361 4.3e-68 263.1 472 40.9
Psat7g113440 Pisum sativum HOM05D003782 ORTHO05D004361 4.3e-68 263.1 459 40.1
CiPaw.09G056900 Carya illinoinensis HOM05D003782 ORTHO05D004361 5.6e-68 262.7 475 42.3
Actinidia05612 Actinidia chinensis HOM05D003782 ORTHO05D004361 1.6e-67 261.2 470 40.2
Ca_18527_v3 Cicer arietinum L. HOM05D003782 ORTHO05D004361 1.6e-67 261.2 456 40.6
CANSAT35G1194 Cannabis sativa HOM05D003782 ORTHO05D004361 6.2e-67 259.2 488 39.3
CsaV3_1G012120 Cucumis sativus L. HOM05D003782 ORTHO05D004361 8.1e-67 258.8 470 40.6
Nitab4.5_0011233g0010 Nicotiana tabacum HOM05D003782 ORTHO05D004361 2.4e-66 257.3 443 40.4
Phvul.002G226800 Phaseolus vulgaris HOM05D003782 ORTHO05D004361 2.4e-66 257.3 453 38.9
TAR624G0538 Trochodendron aralioides HOM05D003782 ORTHO05D003724 2.4e-66 257.3 352 47.2
HanXRQChr08g0209481 Helianthus annuus HOM05D003782 ORTHO05D004361 4.0e-66 256.5 466 38.4
Medtr4g089015 Medicago truncatula HOM05D003782 ORTHO05D004361 1.2e-65 255.0 472 38.1
ClCG03G005890 Citrullus lanatus HOM05D003782 ORTHO05D004361 1.5e-65 254.6 488 40.4
Cc02_g13030 Coffea canephora HOM05D003782 ORTHO05D004361 1.5e-65 254.6 452 39.8
Glyma.13G181800 Glycine max HOM05D003782 ORTHO05D004361 2.0e-65 254.2 469 39.0
vmacro03847 Vaccinium macrocarpon HOM05D003782 ORTHO05D004361 2.0e-65 254.2 488 39.5
Lj1C1208G1 Lonicera japonica HOM05D003782 ORTHO05D004361 2.6e-65 253.8 488 41.2
Nitab4.5_0003668g0120 Nicotiana tabacum HOM05D003782 ORTHO05D004361 3.4e-65 253.4 524 38.7
Lj4g0027811 Lotus japonicus HOM05D003782 ORTHO05D004361 5.8e-65 252.7 462 39.2
Glyma.07G194500 Glycine max HOM05D003782 ORTHO05D004361 1.7e-64 251.1 459 39.2
CAN.G1627.12 Capsicum annuum HOM05D003782 ORTHO05D004361 2.9e-64 250.4 415 42.2
MD05G1316600 Malus domestica HOM05D003782 ORTHO05D004361 1.4e-63 248.1 473 39.5
RcHm_v2.0_Chr5g0007891 Rosa chinensis HOM05D003782 ORTHO05D004361 2.4e-63 247.3 467 39.8
FvH4_3g04800 Fragaria vesca HOM05D003782 ORTHO05D004361 3.2e-63 246.9 468 38.7
FAN16G0824 Fragaria x ananassa HOM05D003782 ORTHO05D004361 3.2e-63 246.9 469 38.8
FAN11G2511 Fragaria x ananassa HOM05D003782 ORTHO05D004361 9.3e-63 245.4 470 38.3
Gohir.A06G209800 Gossypium hirsutum HOM05D003782 ORTHO05D004361 1.2e-62 245.0 474 38.8
Aqoxy4G01073 Aquilegia oxysepala HOM05D003782 ORTHO05D004361 1.6e-62 244.6 476 38.4
Migut.H01508 Erythranthe guttata HOM05D003782 ORTHO05D004361 1.6e-62 244.6 363 43.0
Sc05g0007840 Simmondsia chinensis HOM05D003782 ORTHO05D004361 1.6e-62 244.6 467 38.3
arahy.Tifrunner.gnm1.ann1.1A97AW Arachis hypogaea HOM05D003782 ORTHO05D004361 2.1e-62 244.2 453 39.1
arahy.Tifrunner.gnm1.ann1.2GZF7Z Arachis hypogaea HOM05D003782 ORTHO05D004361 2.1e-62 244.2 453 39.3
Dinv40534 Davidia involucrata HOM05D003782 ORTHO05D004361 2.1e-62 244.2 379 41.7
Solyc02g078560.4 Solanum lycopersicum HOM05D003782 ORTHO05D004361 3.5e-62 243.4 406 40.9
Peaxi162Scf00379g00065 Petunia axillaris HOM05D003782 ORTHO05D004361 6.0e-62 242.7 405 39.8
MBI17_g03751_MAGBIO Magnolia biondii HOM05D003782 ORTHO05D004361 7.8e-62 242.3 462 38.3
FAN21G1192 Fragaria x ananassa HOM05D003782 ORTHO05D004361 1.0e-61 241.9 468 38.7
FAN25G2149 Fragaria x ananassa HOM05D003782 ORTHO05D004361 1.0e-61 241.9 473 39.1
PSO210G1870 Papaver somniferum HOM05D003782 ORTHO05D004361 1.0e-61 241.9 479 38.4
Gorai.010G255000 Gossypium raimondii HOM05D003782 ORTHO05D004361 2.3e-61 240.7 475 38.7
Gohir.D06G211200 Gossypium hirsutum HOM05D003782 ORTHO05D004361 3.0e-61 240.4 474 38.2
Lalb_Chr09g0327561 Lupinus albus HOM05D003782 ORTHO05D004361 3.0e-61 240.4 469 38.6
Sopen02g023410 Solanum pennellii HOM05D003782 ORTHO05D004361 3.0e-61 240.4 407 40.3
AL1G22040 Arabidopsis lyrata HOM05D003782 ORTHO05D004361 3.9e-61 240.0 477 37.7
Lsat_1_v5_gn_7_19080 Lactuca sativa HOM05D003782 ORTHO05D004361 3.9e-61 240.0 474 38.4
CARHR011250 Cardamine hirsuta HOM05D003782 ORTHO05D004361 6.6e-61 239.2 475 38.1
AT1G11060 Arabidopsis thaliana HOM05D003782 ORTHO05D004361 1.9e-60 237.7 477 37.7
PGR042G3934 Punica granatum HOM05D003782 ORTHO05D004361 4.3e-60 236.5 462 39.0
Lalb_Chr05g0218361 Lupinus albus HOM05D003782 ORTHO05D004361 5.6e-60 236.1 458 37.3
Sp1g09750 Schrenkiella parvula HOM05D003782 ORTHO05D004361 5.6e-60 236.1 479 38.0
Carub.0001s1062 Capsella rubella HOM05D003782 ORTHO05D004361 7.3e-60 235.7 477 37.5
PSO832G0898 Papaver somniferum HOM05D003782 ORTHO05D004361 7.3e-60 235.7 480 37.7
Thhalv10006765m.g Eutrema salsugineum HOM05D003782 ORTHO05D004361 9.6e-60 235.3 486 37.0
Oeu014694.1 Olea europaea HOM05D003782 ORTHO05D004361 1.3e-59 235.0 396 39.9
CiPaw.10G046700 Carya illinoinensis HOM05D003782 ORTHO05D004361 2.4e-58 230.7 342 44.4
Hund23698 Selenicereus undatus HOM05D003782 ORTHO05D004361 6.9e-58 229.2 474 36.5
Eucgr.E03352 Eucalyptus grandis HOM05D003782 ORTHO05D004361 1.5e-57 228.0 355 40.8
HanXRQChr04g0124181 Helianthus annuus HOM05D003782 ORTHO05D004361 1.5e-57 228.0 473 35.5
Aa31LG1G3850 Aethionema arabicum HOM05D003782 ORTHO05D004361 3.4e-57 226.9 461 37.7
BraA06t23977Z Brassica rapa HOM05D003782 ORTHO05D004361 5.8e-57 226.1 472 36.7
BolC5t29675H Brassica oleracea HOM05D003782 ORTHO05D004361 7.6e-57 225.7 472 36.9
AUR62016973 Chenopodium quinoa HOM05D003782 ORTHO05D004361 9.9e-57 225.3 359 39.8
C05p09350 Brassica napus HOM05D003782 ORTHO05D004361 1.3e-56 224.9 472 36.9
BraA09t41812Z Brassica rapa HOM05D003782 ORTHO05D004361 2.2e-56 224.2 509 36.0
MELO3C002586.2 Cucumis melo HOM05D003782 ORTHO05D004361 2.2e-56 224.2 510 36.9
Sp2g03490 Schrenkiella parvula HOM05D003782 ORTHO05D004361 2.9e-56 223.8 470 35.7
A09p64830 Brassica napus HOM05D003782 ORTHO05D004361 3.8e-56 223.4 509 36.0
A06p07760 Brassica napus HOM05D003782 ORTHO05D004361 4.9e-56 223.0 472 36.4
MSTRG.14684 Avicennia marina HOM05D003782 ORTHO05D004361 1.1e-55 221.9 360 40.8
AUR62014785 Chenopodium quinoa HOM05D003782 ORTHO05D004361 1.4e-55 221.5 384 38.3
C08p48360 Brassica napus HOM05D003782 ORTHO05D004361 2.4e-55 220.7 470 34.7
BolC8t52375H Brassica oleracea HOM05D003782 ORTHO05D004361 2.4e-55 220.7 470 34.7
EL10Ac8g20337 Beta vulgaris HOM05D003782 ORTHO05D004361 3.2e-55 220.3 360 40.0
AT1G61030 Arabidopsis thaliana HOM05D003782 ORTHO05D004361 4.2e-55 219.9 464 37.3
CDE02G2556 Ceratophyllum demersum HOM05D003782 ORTHO05D004361 4.2e-55 219.9 465 36.3
AL2G15410 Arabidopsis lyrata HOM05D003782 ORTHO05D004361 1.2e-54 218.4 467 37.9
Ah.14g089260 Amaranthus hybridus HOM05D003782 ORTHO05D004361 6.0e-54 216.1 486 34.4
BcaC05g24980 Brassica carinata HOM05D003782 ORTHO05D004361 1.0e-53 215.3 364 39.3
SGA_v2.0_scaffold49G18282 Striga asiatica HOM05D003782 ORTHO05D004361 1.3e-53 214.9 436 37.2
DCAR_008048 Daucus carota HOM05D003782 ORTHO05D004361 5.1e-53 213.0 370 39.5
ATR0680G033 Amborella trichopoda HOM05D003782 ORTHO05D004361 1.1e-52 211.8 497 35.2
Sed0026382 Sechium edule HOM05D003782 ORTHO05D004361 2.5e-52 210.7 447 36.9
Lj6g0013812 Lotus japonicus HOM05D003782 ORTHO05D004361 5.3e-50 203.0 351 37.9
CARHR052160 Cardamine hirsuta HOM05D003782 ORTHO05D004361 1.2e-49 201.8 464 34.9
BcaC07g41789 Brassica carinata HOM05D003782 ORTHO05D004361 2.2e-48 197.6 474 35.0
SalBow8G2382 Salvia bowleyana HOM05D003782 ORTHO05D004361 6.4e-48 196.1 414 35.7
Ah.09g235740 Amaranthus hybridus HOM05D003782 ORTHO05D004361 1.1e-47 195.3 404 36.6
arahy.Tifrunner.gnm1.ann1.HPML60 Arachis hypogaea HOM05D003782 ORTHO05D004361 5.5e-47 193.0 444 33.8
unitig_26.g9369 Utricularia gibba HOM05D003782 ORTHO05D004361 7.1e-47 192.6 386 35.5
Carub.0002s0417 Capsella rubella HOM05D003782 ORTHO05D004361 1.6e-46 191.4 453 35.5
SalBow7G0271 Salvia bowleyana HOM05D003782 ORTHO05D004361 1.6e-46 191.4 420 34.8
SalBow7G0940 Salvia bowleyana HOM05D003782 ORTHO05D004361 1.6e-46 191.4 420 34.8
arahy.Tifrunner.gnm1.ann1.AS4EHM Arachis hypogaea HOM05D003782 ORTHO05D004361 3.5e-46 190.3 445 33.7
FAN07G0886 Fragaria x ananassa HOM05D003782 ORTHO05D004361 5.1e-45 186.4 355 36.6
HPP92_014533 Vanilla planifolia HOM05D003782 ORTHO05D004361 1.4e-42 178.3 480 32.9
Os10g0497000 Oryza sativa ssp. japonica HOM05D003782 ORTHO05D004361 5.3e-42 176.4 354 34.7
Aa31LG2G9560 Aethionema arabicum HOM05D003782 ORTHO05D004361 1.5e-41 174.9 469 31.6
Lalb_Chr20g0122011 Lupinus albus HOM05D003782 ORTHO05D004361 2.9e-40 170.6 348 36.8
Mapoly0014s0099 Marchantia polymorpha HOM05D003782 ORTHO05D004361 6.0e-38 162.9 362 34.3
Zm00001eb220930 Zea mays HOM05D003782 ORTHO05D004361 1.1e-36 158.7 375 33.1
Lj6g0027699 Lotus japonicus HOM05D003782 ORTHO05D004361 1.1e-34 152.1 263 36.9
Duzib235G1248 Durio zibethinus HOM05D003782 ORTHO05D004361 1.1e-31 142.1 246 45.1
Duzib192G0241 Durio zibethinus HOM05D003782 ORTHO05D004361 1.4e-31 141.7 246 43.1
Migut.M01185 Erythranthe guttata HOM05D003782 ORTHO05D004361 1.4e-31 141.7 384 32.3
Pp3c9_20340 Physcomitrium patens HOM05D003782 ORTHO05D004361 7.9e-30 136.0 359 29.5
Pp3c9_20349 Physcomitrium patens HOM05D003782 ORTHO05D004361 7.9e-30 136.0 359 29.5
ECA236G3594 Erigeron canadensis HOM05D003782 ORTHO05D004361 4.1e-26 123.6 204 44.1
SMO169G0190 Selaginella moellendorffii HOM05D003782 ORTHO05D004361 1.5e-25 121.7 353 26.6
FAN28G2813 Fragaria x ananassa HOM05D003782 ORTHO05D004361 5.9e-25 119.8 126 54.8
BcaC05g24978 Brassica carinata HOM05D003782 ORTHO05D004361 4.2e-23 113.6 238 38.7
CBR_g19729 Chara braunii HOM05D003782 ORTHO05D004361 7.9e-22 109.4 387 25.1
Zm00001eb006190 Zea mays HOM05D003782 ORTHO05D004361 8.8e-21 105.9 174 38.5
VMungo0331G2027 Vigna mungo HOM05D003782 ORTHO05D004361 4.8e-19 100.1 98 56.1
VMungo0251G1485 Vigna mungo HOM05D003782 ORTHO05D004361 2.0e-17 94.7 63 71.4
QL05p013418 Quercus lobata HOM05D003782 ORTHO05D004361 1.7e-16 91.7 67 74.6
Zm00001eb044640 Zea mays HOM05D003782 ORTHO05D004361 3.2e-15 87.4 99 48.5
Zm00001eb335960 Zea mays HOM05D003782 ORTHO05D004361 5.5e-15 86.7 135 40.0
Zm00001eb432110 Zea mays HOM05D003782 ORTHO05D004361 1.2e-14 85.5 135 42.2
MD09G1213100 Malus domestica HOM05D003782 ORTHO05D004361 2.7e-14 84.3 114 43.0
SEGI_13110 Sequoiadendron giganteum HOM05D003782 ORTHO05D004361 2.3e-13 81.3 95 48.4
Zm00001eb179180 Zea mays HOM05D003782 ORTHO05D004361 5.2e-13 80.1 135 40.7
Zm00001eb208870 Zea mays HOM05D000229 ORTHO05D004361 3.3e-12 77.4 150 38.0
arahy.Tifrunner.gnm1.ann1.04J95Q Arachis hypogaea HOM05D003782 ORTHO05D004361 9.7e-12 75.9 64 59.4
arahy.Tifrunner.gnm1.ann1.R5EEB5 Arachis hypogaea HOM05D003782 ORTHO05D004361 2.2e-11 74.7 53 67.9
Glyma.04G160500 Glycine max HOM05D003782 ORTHO05D004361 1.4e-10 72.0 97 43.3
QL11p045598 Quercus lobata HOM05D005703 ORTHO05D006643 1.3e-08 65.5 46 76.1
TAR626G0244 Trochodendron aralioides HOM05D003782 ORTHO05D004361 2.2e-08 64.7 69 53.6
Zm00001eb174580 Zea mays HOM05D003782 ORTHO05D004361 7.2e-07 59.7 61 52.5
CSS0046083 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 2.1e-06 58.2 131 38.9


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