Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI01260 Sapria himalayana HOM05D000002 ORTHO05D000047 2.6e-39 164.9 79 100.0
Oeu041660.4 Olea europaea HOM05D000002 ORTHO05D000047 5.3e-16 87.4 145 38.6
Cpa.g.sc32.91 Carica papaya HOM05D000002 ORTHO05D000047 4.9e-14 80.9 77 58.4
SHI01377 Sapria himalayana HOM05D000002 ORTHO05D000047 1.4e-13 79.3 42 83.3
Cpa.g.sc148.30 Carica papaya HOM05D000002 ORTHO05D000047 3.2e-13 78.2 120 39.2
TPR.G38964 Trifolium pratense HOM05D000002 ORTHO05D000047 5.4e-13 77.4 145 33.8
Duzib168G2283 Durio zibethinus HOM05D000002 ORTHO05D000047 5.1e-11 70.9 145 31.7
Duzib187G0946 Durio zibethinus HOM05D000002 ORTHO05D000047 5.1e-11 70.9 145 31.7
VMungo1383G2495 Vigna mungo HOM05D002560 ORTHO05D003782 6.7e-11 70.5 144 32.6
Duzib093G0036 Durio zibethinus HOM05D004195 ORTHO05D005309 8.7e-11 70.1 145 31.0
VMungo1215G3020 Vigna mungo HOM05D000002 ORTHO05D000001 8.7e-11 70.1 42 71.4
Duzib063G0004 Durio zibethinus HOM05D000002 ORTHO05D000047 1.1e-10 69.7 42 69.0
Duzib151G0310 Durio zibethinus HOM05D000002 ORTHO05D000047 1.5e-10 69.3 145 31.0
Oeu008211.1 Olea europaea HOM05D000002 ORTHO05D000047 1.9e-10 68.9 42 69.0
Eucgr.C01993 Eucalyptus grandis HOM05D000002 ORTHO05D000047 2.5e-10 68.6 42 69.0
Cpa.g.sc20.211 Carica papaya HOM05D000002 ORTHO05D000047 5.6e-10 67.4 42 71.4
Duzib248G1273 Durio zibethinus HOM05D000002 ORTHO05D000047 7.4e-10 67.0 42 66.7
Atru.chr11.1318 Acer truncatum HOM05D004129 ORTHO05D005039 1.3e-09 66.2 42 66.7
Duzib168G0509 Durio zibethinus HOM05D000002 ORTHO05D000047 1.3e-09 66.2 42 66.7
SHI31190 Sapria himalayana HOM05D000002 ORTHO05D000047 1.3e-09 66.2 94 43.6
TAR332G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.3e-09 66.2 42 66.7
Cpa.g.sc487.6 Carica papaya HOM05D000002 ORTHO05D000047 2.1e-09 65.5 42 71.4
VMungo0251G1086 Vigna mungo HOM05D000336 ORTHO05D002705 2.1e-09 65.5 42 69.0
VMungo0720G1249 Vigna mungo HOM05D000002 ORTHO05D000047 3.7e-09 64.7 42 66.7
TPR.G30202 Trifolium pratense HOM05D000002 ORTHO05D000001 4.8e-09 64.3 42 66.7
Ca_04068_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000047 1.1e-08 63.2 42 66.7
CSS0039864 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.4e-08 62.0 39 64.1
Cpa.g.sc15.71 Carica papaya HOM05D000002 ORTHO05D000047 2.4e-08 62.0 42 64.3
Manes.10G096950 Manihot esculenta HOM05D000002 ORTHO05D000047 5.3e-08 60.8 42 66.7
Oeu046725.1 Olea europaea HOM05D000002 ORTHO05D000047 5.3e-08 60.8 42 61.9
Cpa.g.sc30.32 Carica papaya HOM05D000002 ORTHO05D000047 6.9e-08 60.5 42 64.3
Cpa.g.sc110.37 Carica papaya HOM05D000002 ORTHO05D000047 9.0e-08 60.1 42 59.5
SHI18135 Sapria himalayana HOM05D000002 ORTHO05D000047 9.0e-08 60.1 112 37.5
Oeu025453.1 Olea europaea HOM05D000002 ORTHO05D000047 1.5e-07 59.3 149 26.8
Oeu034110.1 Olea europaea HOM05D000002 ORTHO05D000047 1.5e-07 59.3 42 64.3
HPP92_021869 Vanilla planifolia HOM05D000002 ORTHO05D000047 4.5e-07 57.8 42 57.1
Potri.004G127101 Populus trichocarpa HOM05D000002 ORTHO05D000047 5.8e-07 57.4 42 59.5
Hma1.2p1_0324F.1_g125750 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 9.9e-07 56.6 47 55.3
HPP92_009345 Vanilla planifolia HOM05D000002 ORTHO05D000047 1.3e-06 56.2 42 54.8
Potri.001G247404 Populus trichocarpa HOM05D000002 ORTHO05D000047 2.9e-06 55.1 42 57.1
QL02p002557 Quercus lobata HOM05D000002 ORTHO05D000001 4.9e-06 54.3 96 36.5
QL12p040299 Quercus lobata HOM05D000002 ORTHO05D000001 4.9e-06 54.3 96 36.5


User provided reference genes

Program Settings