Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI01130 Sapria himalayana HOM05D004802 ORTHO05D005591 3.4e-36 154.5 76 100.0
Potri.014G111100 Populus trichocarpa HOM05D004802 ORTHO05D005591 1.2e-12 76.3 54 68.5
Dinv41117 Davidia involucrata HOM05D001600 ORTHO05D001502 1.3e-11 72.8 55 67.3
GSVIVG01007807001 Vitis vinifera HOM05D004802 ORTHO05D005591 1.9e-10 68.9 54 66.7
DCAR_016496 Daucus carota HOM05D004802 ORTHO05D005591 1.6e-09 65.9 54 59.3
QL03p066954 Quercus lobata HOM05D004802 ORTHO05D005591 1.6e-09 65.9 54 61.1
Rhsim08G0169000 Rhododendron simsii HOM05D004802 ORTHO05D005591 2.1e-09 65.5 54 63.0
Glyma.04G171700 Glycine max HOM05D004802 ORTHO05D005591 2.7e-09 65.1 55 56.4
CSS0004783 Camellia sinensis var. sinensis HOM05D004802 ORTHO05D005591 7.8e-09 63.5 55 58.2
Prupe.5G177600 Prunus persica HOM05D004802 ORTHO05D005591 1.0e-08 63.2 54 59.3
CiPaw.11G030400 Carya illinoinensis HOM05D004802 ORTHO05D005591 1.3e-08 62.8 54 61.1
Cpa.g.sc110.33 Carica papaya HOM05D004802 ORTHO05D005591 1.7e-08 62.4 55 58.2
Cfa019082 Carpinus fangiana HOM05D004802 ORTHO05D005591 1.7e-08 62.4 54 61.1
MELO3C017111.2 Cucumis melo HOM05D004802 ORTHO05D005591 2.3e-08 62.0 63 50.8
TAR362G1012 Trochodendron aralioides HOM05D004802 ORTHO05D005591 2.3e-08 62.0 54 53.7
Haze_07452 Corylus avellana HOM05D004802 ORTHO05D005591 3.0e-08 61.6 54 59.3
DCAR_021562 Daucus carota HOM05D004802 ORTHO05D005591 3.0e-08 61.6 54 61.1
Eucgr.B00348 Eucalyptus grandis HOM05D004802 ORTHO05D005591 3.0e-08 61.6 57 54.4
Glyma.06G192200 Glycine max HOM05D004802 ORTHO05D005591 3.0e-08 61.6 54 51.9
PGR083G1798 Punica granatum HOM05D004802 ORTHO05D005591 5.1e-08 60.8 54 51.9
CsaV3_1G001710 Cucumis sativus L. HOM05D004802 ORTHO05D005591 6.6e-08 60.5 55 56.4
Oeu026523.1 Olea europaea HOM05D004802 ORTHO05D005591 8.7e-08 60.1 58 58.6
MBI19_g12136_MAGBIO Magnolia biondii HOM05D004802 ORTHO05D005591 1.1e-07 59.7 54 53.7
ATR0796G060 Amborella trichopoda HOM05D004802 ORTHO05D005591 2.5e-07 58.5 54 57.4
Cc00_g07690 Coffea canephora HOM05D004802 ORTHO05D005591 2.5e-07 58.5 55 60.0
MSTRG.23103 Avicennia marina HOM05D004802 ORTHO05D005591 3.3e-07 58.2 54 59.3
Peaxi162Scf00689g00332 Petunia axillaris HOM05D004802 ORTHO05D005591 3.3e-07 58.2 54 57.4
QL10p013461 Quercus lobata HOM05D004802 ORTHO05D005591 3.3e-07 58.2 54 57.4
arahy.Tifrunner.gnm1.ann1.RYE93B Arachis hypogaea HOM05D004802 ORTHO05D005591 4.3e-07 57.8 59 55.9
Manes.12G158200 Manihot esculenta HOM05D004802 ORTHO05D005591 4.3e-07 57.8 54 57.4
arahy.Tifrunner.gnm1.ann1.H02ACK Arachis hypogaea HOM05D004802 ORTHO05D005591 5.6e-07 57.4 57 57.9
Cpa.g.sc170.28 Carica papaya HOM05D004802 ORTHO05D005591 5.6e-07 57.4 55 50.9
Lalb_Chr23g0265291 Lupinus albus HOM05D004802 ORTHO05D005591 5.6e-07 57.4 61 52.5
CSS0033619 Camellia sinensis var. sinensis HOM05D004802 ORTHO05D005591 9.6e-07 56.6 55 52.7
Nn2g12605 Nelumbo nucifera HOM05D004802 ORTHO05D005591 9.6e-07 56.6 57 56.1
RcHm_v2.0_Chr7g0179521 Rosa chinensis HOM05D004802 ORTHO05D005591 1.2e-06 56.2 54 55.6
vmacro16596 Vaccinium macrocarpon HOM05D004802 ORTHO05D005591 1.2e-06 56.2 55 54.5
ECA232G0284 Erigeron canadensis HOM05D004802 ORTHO05D005591 1.6e-06 55.8 55 52.7
arahy.Tifrunner.gnm1.ann1.J5PS4T Arachis hypogaea HOM05D004802 ORTHO05D005591 2.1e-06 55.5 57 56.1
Nitab4.5_0000499g0020 Nicotiana tabacum HOM05D004802 ORTHO05D005591 2.1e-06 55.5 55 54.5
HanXRQChr05g0155531 Helianthus annuus HOM05D004802 ORTHO05D005591 2.8e-06 55.1 55 52.7
Hma1.2p1_0483F.1_g162710 Hydrangea macrophylla HOM05D004802 ORTHO05D005591 2.8e-06 55.1 54 51.9
MD14G1184900 Malus domestica HOM05D004802 ORTHO05D005591 2.8e-06 55.1 52 53.8
Sed0010100 Sechium edule HOM05D004802 ORTHO05D005591 2.8e-06 55.1 55 50.9
VMungo1309G2385 Vigna mungo HOM05D004802 ORTHO05D005591 2.8e-06 55.1 54 48.1
Atru.chr9.2421 Acer truncatum HOM05D004802 ORTHO05D005591 3.6e-06 54.7 61 47.5
Potri.002G185800 Populus trichocarpa HOM05D004802 ORTHO05D005591 3.6e-06 54.7 56 55.4
unitig_27.g24928 Utricularia gibba HOM05D004802 ORTHO05D005591 3.6e-06 54.7 54 46.3
Migut.D01783 Erythranthe guttata HOM05D004802 ORTHO05D005591 4.7e-06 54.3 55 54.5
MBI18_g21823_MAGBIO Magnolia biondii HOM05D004802 ORTHO05D005591 4.7e-06 54.3 55 52.7
Phvul.009G188900 Phaseolus vulgaris HOM05D004802 ORTHO05D005591 6.2e-06 53.9 54 48.1
Hund18328 Selenicereus undatus HOM05D004802 ORTHO05D005591 6.2e-06 53.9 54 51.9
Solyc03g114050.3 Solanum lycopersicum HOM05D004802 ORTHO05D005591 6.2e-06 53.9 54 53.7
Sopen03g033100 Solanum pennellii HOM05D004802 ORTHO05D005591 6.2e-06 53.9 54 53.7
A09p66160 Brassica napus HOM05D004802 ORTHO05D005591 8.1e-06 53.5 55 52.7
BraA09t41954Z Brassica rapa HOM05D004802 ORTHO05D005591 8.1e-06 53.5 55 52.7
LjContig00081g0027263 Lotus japonicus HOM05D004802 ORTHO05D005591 8.1e-06 53.5 54 48.1
TPR.G20968 Trifolium pratense HOM05D004802 ORTHO05D005591 8.1e-06 53.5 54 51.9


User provided reference genes

Program Settings