Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI01092 Sapria himalayana HOM05D004618 ORTHO05D005318 9.5e-167 590.1 300 100.0
RcHm_v2.0_Chr4g0385211 Rosa chinensis HOM05D004618 ORTHO05D005318 4.2e-82 308.9 301 54.8
Manes.15G051466 Manihot esculenta HOM05D004618 ORTHO05D005318 5.5e-82 308.5 300 51.7
Dinv38259 Davidia involucrata HOM05D004618 ORTHO05D005318 5.2e-80 302.0 289 53.3
FvH4_4g00330 Fragaria vesca HOM05D004618 ORTHO05D005318 1.5e-79 300.4 301 53.5
FAN22G1357 Fragaria x ananassa HOM05D004618 ORTHO05D005318 2.6e-79 299.7 301 54.2
MD09G1000200 Malus domestica HOM05D004618 ORTHO05D005318 3.3e-79 299.3 301 52.2
Nn1g07791 Nelumbo nucifera HOM05D004618 ORTHO05D005318 4.4e-79 298.9 302 51.3
FAN12G0850 Fragaria x ananassa HOM05D004618 ORTHO05D005318 7.5e-79 298.1 301 52.8
FAN17G0872 Fragaria x ananassa HOM05D004618 ORTHO05D005318 1.7e-78 297.0 301 52.8
CiPaw.01G124800 Carya illinoinensis HOM05D004618 ORTHO05D005318 8.2e-78 294.7 302 50.7
Cfa014885 Carpinus fangiana HOM05D004618 ORTHO05D005318 1.1e-77 294.3 302 50.7
Prupe.3G316000 Prunus persica HOM05D004618 ORTHO05D005318 1.8e-77 293.5 299 51.8
DCAR_024331 Daucus carota HOM05D004618 ORTHO05D005318 4.1e-77 292.4 302 49.7
Thecc.04G208200 Theobroma cacao HOM05D004618 ORTHO05D005318 4.1e-77 292.4 302 51.0
vmacro00499 Vaccinium macrocarpon HOM05D004618 ORTHO05D005318 2.0e-76 290.0 323 48.6
Duzib212G0527 Durio zibethinus HOM05D004618 ORTHO05D005318 4.5e-76 288.9 302 50.3
Potri.001G050300 Populus trichocarpa HOM05D004618 ORTHO05D005318 7.7e-76 288.1 302 48.0
HanXRQChr10g0310121 Helianthus annuus HOM05D004618 ORTHO05D005318 6.5e-75 285.0 312 48.1
CANSAT78G0267 Cannabis sativa HOM05D004618 ORTHO05D005318 8.5e-75 284.6 302 50.3
GSVIVG01003592001 Vitis vinifera HOM05D004618 ORTHO05D005318 1.5e-74 283.9 302 48.0
MBI07_g23668_MAGBIO Magnolia biondii HOM05D004618 ORTHO05D005318 4.2e-74 282.3 302 49.7
Nitab4.5_0000306g0090 Nicotiana tabacum HOM05D004618 ORTHO05D005318 4.2e-74 282.3 302 50.0
Ciclev10006732m.g Citrus clementina HOM05D004618 ORTHO05D005318 5.5e-74 282.0 293 50.9
ECA248G0292 Erigeron canadensis HOM05D004618 ORTHO05D005318 5.5e-74 282.0 303 47.2
Actinidia34629 Actinidia chinensis HOM05D004618 ORTHO05D005318 7.2e-74 281.6 302 49.7
PSO017G2612 Papaver somniferum HOM05D004618 ORTHO05D005318 1.6e-73 280.4 299 50.5
TWI09G1249 Tripterygium wilfordii HOM05D004618 ORTHO05D005318 1.6e-73 280.4 305 49.8
TAR365G1130 Trochodendron aralioides HOM05D004618 ORTHO05D005318 2.1e-73 280.0 302 49.0
PSO063G1896 Papaver somniferum HOM05D004618 ORTHO05D005318 2.7e-73 279.6 299 49.8
THA.LOC104826111 Tarenaya hassleriana HOM05D004618 ORTHO05D005318 2.7e-73 279.6 301 47.2
Phvul.007G235800 Phaseolus vulgaris HOM05D004618 ORTHO05D005318 8.0e-73 278.1 299 49.2
Gohir.D09G052960 Gossypium hirsutum HOM05D004618 ORTHO05D005318 1.4e-72 277.3 301 49.5
Gorai.006G056100 Gossypium raimondii HOM05D004618 ORTHO05D005318 1.4e-72 277.3 301 49.5
GSVIVG01001871001 Vitis vinifera HOM05D004618 ORTHO05D005318 1.4e-72 277.3 295 48.1
Lalb_Chr03g0036601 Lupinus albus HOM05D004618 ORTHO05D005318 2.3e-72 276.6 298 49.7
Lsat_1_v5_gn_1_72241 Lactuca sativa HOM05D004618 ORTHO05D005318 1.5e-71 273.9 322 45.7
Eucgr.H02841 Eucalyptus grandis HOM05D004618 ORTHO05D005318 4.4e-71 272.3 300 48.3
Hma1.2p1_3134F.1_g332990 Hydrangea macrophylla HOM05D004618 ORTHO05D005318 4.4e-71 272.3 301 48.2
Solyc09g091650.3 Solanum lycopersicum HOM05D004618 ORTHO05D005318 5.7e-71 271.9 300 48.3
CAN.G500.60 Capsicum annuum HOM05D004618 ORTHO05D005318 7.5e-71 271.6 300 49.0
Glyma.20G075951 Glycine max HOM05D004618 ORTHO05D005318 7.5e-71 271.6 299 48.5
Gohir.A09G052300 Gossypium hirsutum HOM05D004618 ORTHO05D005318 2.2e-70 270.0 298 49.3
Sp1g03570 Schrenkiella parvula HOM05D004618 ORTHO05D005318 1.8e-69 266.9 301 46.2
Ca_13906_v3 Cicer arietinum L. HOM05D004618 ORTHO05D005318 4.1e-69 265.8 300 48.7
Glyma.10G123400 Glycine max HOM05D004618 ORTHO05D005318 5.4e-69 265.4 299 46.8
Lj6g0012936 Lotus japonicus HOM05D004618 ORTHO05D005318 9.1e-69 264.6 299 46.8
Sopen09g034560 Solanum pennellii HOM05D004618 ORTHO05D005318 9.1e-69 264.6 319 45.8
Thhalv10006720m.g Eutrema salsugineum HOM05D004618 ORTHO05D005318 1.6e-68 263.8 301 45.8
arahy.Tifrunner.gnm1.ann1.30ZQL1 Arachis hypogaea HOM05D004618 ORTHO05D005318 2.0e-68 263.5 323 45.2
A10p03150 Brassica napus HOM05D004618 ORTHO05D005318 2.0e-68 263.5 301 46.8
BraA10t42588Z Brassica rapa HOM05D004618 ORTHO05D005318 2.0e-68 263.5 301 46.8
Aqoxy2G03762 Aquilegia oxysepala HOM05D004618 ORTHO05D005318 4.5e-68 262.3 302 45.4
Migut.N00349 Erythranthe guttata HOM05D004618 ORTHO05D005318 7.7e-68 261.5 301 46.8
AL1G14450 Arabidopsis lyrata HOM05D004618 ORTHO05D005318 2.9e-67 259.6 301 45.5
AT1G04730 Arabidopsis thaliana HOM05D004618 ORTHO05D005318 2.9e-67 259.6 301 45.2
arahy.Tifrunner.gnm1.ann1.NE6RSN Arachis hypogaea HOM05D004618 ORTHO05D005318 2.9e-67 259.6 323 45.5
Psat6g048480 Pisum sativum HOM05D004618 ORTHO05D005318 2.9e-67 259.6 299 47.5
SGA_v2.0_scaffold323G48644 Striga asiatica HOM05D004618 ORTHO05D005318 2.9e-67 259.6 299 44.5
Carub.0001s0398 Capsella rubella HOM05D004618 ORTHO05D005318 8.5e-67 258.1 301 45.2
C05p02920 Brassica napus HOM05D004618 ORTHO05D005318 1.1e-66 257.7 301 45.5
Sed0003506 Sechium edule HOM05D004618 ORTHO05D005318 1.1e-66 257.7 302 45.0
Ah.13g078120 Amaranthus hybridus HOM05D004618 ORTHO05D005318 1.9e-66 256.9 301 44.2
Os03g0264800 Oryza sativa ssp. japonica HOM05D004618 ORTHO05D005318 1.9e-66 256.9 301 47.8
Zm00001eb011700 Zea mays HOM05D004618 ORTHO05D005318 4.2e-66 255.8 301 46.2
Medtr1g047790 Medicago truncatula HOM05D004618 ORTHO05D005318 9.4e-66 254.6 299 47.2
CARHR004120 Cardamine hirsuta HOM05D004618 ORTHO05D005318 1.2e-65 254.2 300 44.7
MELO3C006327.2 Cucumis melo HOM05D004618 ORTHO05D005318 1.6e-65 253.8 302 44.4
Haze_11582 Corylus avellana HOM05D004618 ORTHO05D005318 4.7e-65 252.3 259 49.4
BolC5t29073H Brassica oleracea HOM05D004618 ORTHO05D005318 6.1e-65 251.9 301 44.9
CsaV3_3G011150 Cucumis sativus L. HOM05D004618 ORTHO05D005318 6.1e-65 251.9 302 44.4
Sc19g0007110 Simmondsia chinensis HOM05D004618 ORTHO05D005318 1.4e-64 250.8 302 44.0
Peaxi162Scf00047g01035 Petunia axillaris HOM05D004618 ORTHO05D005318 1.5e-63 247.3 302 46.4
GSVIVG01012969001 Vitis vinifera HOM05D004618 ORTHO05D005318 5.7e-63 245.4 356 39.0
MSTRG.24629 Avicennia marina HOM05D004618 ORTHO05D005318 1.3e-62 244.2 301 42.9
ATR1126G077 Amborella trichopoda HOM05D004618 ORTHO05D005318 1.7e-62 243.8 301 44.5
EL10Ac3g07492 Beta vulgaris HOM05D004618 ORTHO05D005318 8.3e-62 241.5 321 42.1
Cc03_g07450 Coffea canephora HOM05D004618 ORTHO05D005318 5.4e-61 238.8 354 39.5
BolC8t46953H Brassica oleracea HOM05D004618 ORTHO05D005318 3.8e-59 232.6 301 44.2
Sabra01G0035200 Salix brachista HOM05D004618 ORTHO05D005318 6.6e-59 231.9 197 54.8
ClCG05G003490 Citrullus lanatus HOM05D004618 ORTHO05D005318 1.9e-58 230.3 373 36.5
GSVIVG01034307001 Vitis vinifera HOM05D004618 ORTHO05D005318 4.3e-58 229.2 197 54.8
HPP92_001457 Vanilla planifolia HOM05D004618 ORTHO05D005318 5.6e-58 228.8 266 45.9
C08p01440 Brassica napus HOM05D004618 ORTHO05D005318 1.2e-57 227.6 301 42.9
Lj3A569T42 Lonicera japonica HOM05D004618 ORTHO05D005318 1.8e-56 223.8 197 52.8
SEGI_18128 Sequoiadendron giganteum HOM05D004618 ORTHO05D005318 1.5e-55 220.7 302 39.7
VMungo0720G2098 Vigna mungo HOM05D004618 ORTHO05D005318 1.5e-55 220.7 251 46.2
TPR.G19802 Trifolium pratense HOM05D004618 ORTHO05D005318 2.2e-54 216.9 325 41.8
Atru.chr4.1755 Acer truncatum HOM05D004618 ORTHO05D005318 1.3e-51 207.6 302 41.1
SalBow3G3268 Salvia bowleyana HOM05D004618 ORTHO05D005318 1.9e-50 203.8 273 41.8
AUR62020811 Chenopodium quinoa HOM05D004618 ORTHO05D005318 3.1e-48 196.4 197 47.2
BcaC07g36884 Brassica carinata HOM05D004618 ORTHO05D005318 4.4e-47 192.6 310 37.1
Pp3c7_23730 Physcomitrium patens HOM05D004618 ORTHO05D005318 5.4e-45 185.7 321 34.9
unitig_21.g20007 Utricularia gibba HOM05D004618 ORTHO05D005318 2.5e-42 176.8 259 39.4
Aa31LG1G20160 Aethionema arabicum HOM05D004618 ORTHO05D005318 3.3e-42 176.4 383 32.1
GSVIVG01013292001 Vitis vinifera HOM05D004618 ORTHO05D005318 4.7e-41 172.6 134 58.2
HPP92_001444 Vanilla planifolia HOM05D004618 ORTHO05D005318 2.6e-39 166.8 162 48.1
Mapoly0122s0062 Marchantia polymorpha HOM05D004618 ORTHO05D005318 1.4e-37 161.0 311 33.1
AagrBONN_evm.TU.Sc2ySwM_228.5703 Anthoceros agrestis HOM05D004618 ORTHO05D005318 6.0e-36 155.6 305 34.4
Lj3C557T17 Lonicera japonica HOM05D004618 ORTHO05D005318 7.6e-31 138.7 115 52.2
GSVIVG01034323001 Vitis vinifera HOM05D004618 ORTHO05D005318 1.6e-28 131.0 111 55.0
CBR_g33934 Chara braunii HOM05D000019 ORTHO05D000048 1.8e-24 117.5 199 30.7
GSVIVG01029095001 Vitis vinifera HOM05D004618 ORTHO05D005318 1.1e-21 108.2 111 47.7
GSVIVG01012955001 Vitis vinifera HOM05D004618 ORTHO05D005318 1.5e-18 97.8 82 52.4
Cre16.g686950 Chlamydomonas reinhardtii HOM05D004618 ORTHO05D005318 2.1e-17 94.0 307 25.4
GSVIVG01003879001 Vitis vinifera HOM05D004618 ORTHO05D005318 6.2e-17 92.4 68 57.4
COL.COLO4_20296 Corchorus olitorius HOM05D004618 ORTHO05D005318 5.3e-16 89.4 56 78.6
Lj3A557T55 Lonicera japonica HOM05D004618 ORTHO05D005318 9.9e-15 85.1 71 62.0
Lj3A569T43 Lonicera japonica HOM05D004618 ORTHO05D005318 2.2e-14 84.0 79 54.4
FAN17G2976 Fragaria x ananassa HOM05D004618 ORTHO05D005318 1.4e-13 81.3 46 84.8
Oeu063486.3 Olea europaea HOM05D004618 ORTHO05D005318 1.9e-13 80.9 48 81.2
GSVIVG01034308001 Vitis vinifera HOM05D004618 ORTHO05D005318 2.1e-12 77.4 69 58.0
GSVIVG01037607001 Vitis vinifera HOM05D004618 ORTHO05D005318 1.3e-11 74.7 69 56.5
PRCOL_00005798 Prasinoderma coloniale HOM05D004618 ORTHO05D005318 3.9e-11 73.2 314 22.0
MCO09G046 Micromonas commoda HOM05D004618 ORTHO05D005318 1.5e-10 71.2 291 25.1
GSVIVG01012956001 Vitis vinifera HOM05D004618 ORTHO05D005318 5.6e-10 69.3 71 53.5
TPR.G34820 Trifolium pratense HOM05D004618 ORTHO05D005318 2.1e-09 67.4 54 53.7
GSVIVG01013291001 Vitis vinifera HOM05D004618 ORTHO05D005318 2.2e-06 57.4 35 74.3


User provided reference genes

Program Settings