Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI01091 Sapria himalayana HOM05D004618 ORTHO05D005318 2.4e-78 295.4 148 100.0
MSTRG.24629 Avicennia marina HOM05D004618 ORTHO05D005318 2.9e-36 155.6 110 68.2
GSVIVG01012956001 Vitis vinifera HOM05D004618 ORTHO05D005318 2.9e-36 155.6 85 88.2
GSVIVG01034308001 Vitis vinifera HOM05D004618 ORTHO05D005318 2.9e-36 155.6 85 88.2
GSVIVG01003592001 Vitis vinifera HOM05D004618 ORTHO05D005318 3.8e-36 155.2 110 70.9
Nn1g07791 Nelumbo nucifera HOM05D004618 ORTHO05D005318 6.6e-36 154.5 111 69.4
TAR365G1130 Trochodendron aralioides HOM05D004618 ORTHO05D005318 6.6e-36 154.5 109 71.6
Actinidia34629 Actinidia chinensis HOM05D004618 ORTHO05D005318 1.1e-35 153.7 118 67.8
Aqoxy2G03762 Aquilegia oxysepala HOM05D004618 ORTHO05D005318 1.1e-35 153.7 100 75.0
Lj3A557T55 Lonicera japonica HOM05D004618 ORTHO05D005318 1.5e-35 153.3 106 71.7
Manes.15G051466 Manihot esculenta HOM05D004618 ORTHO05D005318 1.5e-35 153.3 85 85.9
GSVIVG01003880001 Vitis vinifera HOM05D004618 ORTHO05D005318 1.5e-35 153.3 85 87.1
SalBow3G3268 Salvia bowleyana HOM05D004618 ORTHO05D005318 1.9e-35 152.9 103 73.8
unitig_21.g20007 Utricularia gibba HOM05D004618 ORTHO05D005318 3.3e-35 152.1 92 78.3
Cfa014885 Carpinus fangiana HOM05D004618 ORTHO05D005318 4.3e-35 151.8 109 69.7
Cc03_g07450 Coffea canephora HOM05D004618 ORTHO05D005318 4.3e-35 151.8 110 66.4
Haze_11582 Corylus avellana HOM05D004618 ORTHO05D005318 4.3e-35 151.8 109 69.7
Duzib212G0527 Durio zibethinus HOM05D004618 ORTHO05D005318 4.3e-35 151.8 125 63.2
MBI07_g23668_MAGBIO Magnolia biondii HOM05D004618 ORTHO05D005318 4.3e-35 151.8 85 84.7
Rhsim09G0051800 Rhododendron simsii HOM05D004618 ORTHO05D005318 4.3e-35 151.8 92 80.4
Thecc.04G208200 Theobroma cacao HOM05D004618 ORTHO05D005318 4.3e-35 151.8 115 66.1
Migut.N00349 Erythranthe guttata HOM05D004618 ORTHO05D005318 5.6e-35 151.4 110 67.3
Lj3A569T43 Lonicera japonica HOM05D004618 ORTHO05D005318 5.6e-35 151.4 85 85.9
Dinv38259 Davidia involucrata HOM05D004618 ORTHO05D005318 7.3e-35 151.0 85 84.7
COL.COLO4_20296 Corchorus olitorius HOM05D004618 ORTHO05D005318 9.5e-35 150.6 112 68.8
DCAR_024331 Daucus carota HOM05D004618 ORTHO05D005318 9.5e-35 150.6 85 83.5
GSVIVG01013291001 Vitis vinifera HOM05D004618 ORTHO05D005318 1.2e-34 150.2 85 84.7
Medtr1g047790 Medicago truncatula HOM05D004618 ORTHO05D005318 1.6e-34 149.8 92 76.1
Potri.001G050300 Populus trichocarpa HOM05D004618 ORTHO05D005318 1.6e-34 149.8 109 69.7
CiPaw.01G124800 Carya illinoinensis HOM05D004618 ORTHO05D005318 2.1e-34 149.4 103 70.9
FAN12G0850 Fragaria x ananassa HOM05D004618 ORTHO05D005318 2.1e-34 149.4 95 76.8
FAN22G1357 Fragaria x ananassa HOM05D004618 ORTHO05D005318 2.1e-34 149.4 95 76.8
BcaC07g36884 Brassica carinata HOM05D004618 ORTHO05D005318 2.8e-34 149.1 87 81.6
C08p01440 Brassica napus HOM05D004618 ORTHO05D005318 2.8e-34 149.1 87 81.6
BolC8t46953H Brassica oleracea HOM05D004618 ORTHO05D005318 2.8e-34 149.1 87 81.6
CARHR004120 Cardamine hirsuta HOM05D004618 ORTHO05D005318 2.8e-34 149.1 114 64.9
vmacro00499 Vaccinium macrocarpon HOM05D004618 ORTHO05D005318 2.8e-34 149.1 93 80.6
Ciclev10006428m.g Citrus clementina HOM05D004618 ORTHO05D005318 3.6e-34 148.7 85 82.4
PSO017G2612 Papaver somniferum HOM05D004618 ORTHO05D005318 3.6e-34 148.7 85 81.2
PSO063G1896 Papaver somniferum HOM05D004618 ORTHO05D005318 3.6e-34 148.7 85 81.2
RcHm_v2.0_Chr4g0385211 Rosa chinensis HOM05D004618 ORTHO05D005318 3.6e-34 148.7 95 75.8
ATR1126G077 Amborella trichopoda HOM05D004618 ORTHO05D005318 4.7e-34 148.3 85 78.8
Ca_13906_v3 Cicer arietinum L. HOM05D004618 ORTHO05D005318 4.7e-34 148.3 110 64.5
Carub.0001s0398 Capsella rubella HOM05D004618 ORTHO05D005318 6.1e-34 147.9 116 64.7
FAN17G0872 Fragaria x ananassa HOM05D004618 ORTHO05D005318 6.1e-34 147.9 95 75.8
FAN17G2976 Fragaria x ananassa HOM05D004618 ORTHO05D005318 6.1e-34 147.9 86 82.6
Gorai.006G056100 Gossypium raimondii HOM05D004618 ORTHO05D005318 6.1e-34 147.9 85 82.4
Psat6g048480 Pisum sativum HOM05D004618 ORTHO05D005318 6.1e-34 147.9 85 80.0
THA.LOC104826111 Tarenaya hassleriana HOM05D004618 ORTHO05D005318 6.1e-34 147.9 85 84.7
GSVIVG01012968001 Vitis vinifera HOM05D004618 ORTHO05D005318 6.1e-34 147.9 85 84.7
Atru.chr4.1755 Acer truncatum HOM05D004618 ORTHO05D005318 8.0e-34 147.5 109 67.9
CAN.G500.60 Capsicum annuum HOM05D004618 ORTHO05D005318 8.0e-34 147.5 110 67.3
CsaV3_3G011150 Cucumis sativus L. HOM05D004618 ORTHO05D005318 8.0e-34 147.5 85 80.0
ECA248G0292 Erigeron canadensis HOM05D004618 ORTHO05D005318 8.0e-34 147.5 100 73.0
FvH4_4g00330 Fragaria vesca HOM05D004618 ORTHO05D005318 8.0e-34 147.5 95 75.8
Oeu063486.3 Olea europaea HOM05D004618 ORTHO05D005318 8.0e-34 147.5 85 81.2
Sabra01G0035200 Salix brachista HOM05D004618 ORTHO05D005318 8.0e-34 147.5 86 81.4
Sopen09g034560 Solanum pennellii HOM05D004618 ORTHO05D005318 8.0e-34 147.5 110 67.3
TWI09G1249 Tripterygium wilfordii HOM05D004618 ORTHO05D005318 8.0e-34 147.5 106 67.9
A10p03150 Brassica napus HOM05D004618 ORTHO05D005318 1.0e-33 147.1 87 80.5
BolC5t29073H Brassica oleracea HOM05D004618 ORTHO05D005318 1.0e-33 147.1 87 80.5
BraA10t42588Z Brassica rapa HOM05D004618 ORTHO05D005318 1.0e-33 147.1 87 80.5
AUR62020811 Chenopodium quinoa HOM05D004618 ORTHO05D005318 1.0e-33 147.1 85 82.4
MELO3C006327.2 Cucumis melo HOM05D004618 ORTHO05D005318 1.0e-33 147.1 85 78.8
Os03g0264800 Oryza sativa ssp. japonica HOM05D004618 ORTHO05D005318 1.0e-33 147.1 85 80.0
Sp1g03570 Schrenkiella parvula HOM05D004618 ORTHO05D005318 1.0e-33 147.1 87 80.5
Solyc09g091650.3 Solanum lycopersicum HOM05D004618 ORTHO05D005318 1.4e-33 146.7 110 67.3
SGA_v2.0_scaffold323G48644 Striga asiatica HOM05D004618 ORTHO05D005318 1.4e-33 146.7 94 74.5
AT1G04730 Arabidopsis thaliana HOM05D004618 ORTHO05D005318 1.8e-33 146.4 108 68.5
SEGI_18128 Sequoiadendron giganteum HOM05D004618 ORTHO05D005318 1.8e-33 146.4 85 81.2
AL1G14450 Arabidopsis lyrata HOM05D004618 ORTHO05D005318 2.3e-33 146.0 102 71.6
GSVIVG01001872001 Vitis vinifera HOM05D004618 ORTHO05D005318 2.3e-33 146.0 87 82.8
C05p02920 Brassica napus HOM05D004618 ORTHO05D005318 3.0e-33 145.6 87 79.3
CANSAT78G0267 Cannabis sativa HOM05D004618 ORTHO05D005318 3.0e-33 145.6 100 70.0
Thhalv10006720m.g Eutrema salsugineum HOM05D004618 ORTHO05D005318 3.0e-33 145.6 97 73.2
Gohir.A09G052300 Gossypium hirsutum HOM05D004618 ORTHO05D005318 3.0e-33 145.6 85 81.2
Gohir.D09G052960 Gossypium hirsutum HOM05D004618 ORTHO05D005318 3.0e-33 145.6 85 81.2
HanXRQChr10g0310121 Helianthus annuus HOM05D004618 ORTHO05D005318 3.0e-33 145.6 92 77.2
Phvul.007G235800 Phaseolus vulgaris HOM05D004618 ORTHO05D005318 3.0e-33 145.6 85 78.8
GSVIVG01003526001 Vitis vinifera HOM05D004618 ORTHO05D005318 3.0e-33 145.6 85 83.5
Aa31LG1G20160 Aethionema arabicum HOM05D004618 ORTHO05D005318 4.0e-33 145.2 87 80.5
Sc19g0007110 Simmondsia chinensis HOM05D004618 ORTHO05D005318 4.0e-33 145.2 123 61.0
Zm00001eb011700 Zea mays HOM05D004618 ORTHO05D005318 4.0e-33 145.2 85 78.8
Lsat_1_v5_gn_1_72241 Lactuca sativa HOM05D004618 ORTHO05D005318 5.2e-33 144.8 92 76.1
Sed0003506 Sechium edule HOM05D004618 ORTHO05D005318 5.2e-33 144.8 85 77.6
Glyma.10G123400 Glycine max HOM05D004618 ORTHO05D005318 6.8e-33 144.4 85 77.6
EL10Ac3g07492 Beta vulgaris HOM05D004618 ORTHO05D005318 8.9e-33 144.1 87 79.3
ClCG05G003490 Citrullus lanatus HOM05D004618 ORTHO05D005318 1.2e-32 143.7 113 61.9
arahy.Tifrunner.gnm1.ann1.30ZQL1 Arachis hypogaea HOM05D004618 ORTHO05D005318 1.5e-32 143.3 85 76.5
arahy.Tifrunner.gnm1.ann1.NE6RSN Arachis hypogaea HOM05D004618 ORTHO05D005318 1.5e-32 143.3 85 76.5
Peaxi162Scf00047g01035 Petunia axillaris HOM05D004618 ORTHO05D005318 1.5e-32 143.3 109 67.0
Glyma.20G075951 Glycine max HOM05D004618 ORTHO05D005318 2.0e-32 142.9 85 76.5
Lalb_Chr03g0036601 Lupinus albus HOM05D004618 ORTHO05D005318 2.0e-32 142.9 95 69.5
CDE05G3475 Ceratophyllum demersum HOM05D004618 ORTHO05D005318 3.4e-32 142.1 85 78.8
Nitab4.5_0002412g0020 Nicotiana tabacum HOM05D004618 ORTHO05D005318 4.4e-32 141.7 87 78.2
Nitab4.5_0000306g0090 Nicotiana tabacum HOM05D004618 ORTHO05D005318 5.8e-32 141.4 87 77.0
Ah.13g078120 Amaranthus hybridus HOM05D004618 ORTHO05D005318 1.3e-31 140.2 110 62.7
Lj6g0012936 Lotus japonicus HOM05D004618 ORTHO05D005318 6.4e-31 137.9 108 60.2
TPR.G19802 Trifolium pratense HOM05D004618 ORTHO05D005318 1.4e-30 136.7 107 63.6
Prupe.3G316000 Prunus persica HOM05D004618 ORTHO05D005318 7.0e-30 134.4 110 63.6
MD09G1000200 Malus domestica HOM05D004618 ORTHO05D005318 9.2e-30 134.0 93 73.1
HPP92_001457 Vanilla planifolia HOM05D004618 ORTHO05D005318 5.0e-28 128.3 77 77.9
Pp3c7_23730 Physcomitrium patens HOM05D004618 ORTHO05D005318 1.2e-26 123.6 87 64.4
AagrBONN_evm.TU.Sc2ySwM_228.5703 Anthoceros agrestis HOM05D004618 ORTHO05D005318 8.0e-26 120.9 87 64.4
Mapoly0122s0062 Marchantia polymorpha HOM05D004618 ORTHO05D005318 1.4e-25 120.2 77 68.8
CBR_g49379 Chara braunii HOM05D004618 ORTHO05D005318 7.5e-24 114.4 89 58.4
MCO09G046 Micromonas commoda HOM05D004618 ORTHO05D005318 9.2e-22 107.5 91 56.0
PRCOL_00005798 Prasinoderma coloniale HOM05D004618 ORTHO05D005318 3.5e-21 105.5 91 54.9
Cre16.g686950 Chlamydomonas reinhardtii HOM05D004618 ORTHO05D005318 6.6e-20 101.3 91 49.5
Cpa.g.sc59.114 Carica papaya HOM05D004618 ORTHO05D005318 6.2e-18 94.7 74 64.9
Cfa027206 Carpinus fangiana HOM05D004618 ORTHO05D005318 4.6e-13 78.6 93 44.1
SEGI_15253 Sequoiadendron giganteum HOM05D004618 ORTHO05D005318 1.1e-09 67.4 57 57.9
HPP92_001443 Vanilla planifolia HOM05D004618 ORTHO05D005318 3.1e-09 65.9 78 47.4
Cfa025270 Carpinus fangiana HOM05D004977 ORTHO05D006454 1.5e-08 63.5 96 37.5
AagrBONN_evm.TU.Sc2ySwM_228.1947 Anthoceros agrestis HOM05D004977 ORTHO05D006454 3.8e-07 58.9 98 31.6
MCO16G356 Micromonas commoda HOM05D004977 ORTHO05D006454 4.9e-07 58.5 95 33.7
Mapoly0030s0061 Marchantia polymorpha HOM05D004977 ORTHO05D006454 2.4e-06 56.2 107 31.8
Hund25154 Selenicereus undatus HOM05D004977 ORTHO05D006454 7.1e-06 54.7 98 30.6
CANSAT25G3123 Cannabis sativa HOM05D004977 ORTHO05D006454 9.2e-06 54.3 103 30.1
MELO3C014528.2 Cucumis melo HOM05D004977 ORTHO05D006454 9.2e-06 54.3 105 31.4
CsaV3_6G038660 Cucumis sativus L. HOM05D004977 ORTHO05D006454 9.2e-06 54.3 105 31.4


User provided reference genes

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