Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI00991 Sapria himalayana HOM05D006284 ORTHO05D007793 1.1e-80 303.1 145 100.0
vmacro14530 Vaccinium macrocarpon HOM05D006284 ORTHO05D007793 1.1e-51 206.8 145 67.6
Sabra16G0143200 Salix brachista HOM05D006284 ORTHO05D007793 1.4e-51 206.5 142 69.7
MD11G1144900 Malus domestica HOM05D006284 ORTHO05D007793 4.1e-51 204.9 141 68.1
Atru.chr3.3846 Acer truncatum HOM05D006284 ORTHO05D007793 9.2e-51 203.8 139 69.8
Haze_24061 Corylus avellana HOM05D006284 ORTHO05D007793 1.2e-50 203.4 142 66.2
Potri.001G237500 Populus trichocarpa HOM05D006284 ORTHO05D007793 2.1e-50 202.6 142 66.9
CiPaw.13G097000 Carya illinoinensis HOM05D006284 ORTHO05D007793 4.6e-50 201.4 142 67.6
Aqoxy4G02964 Aquilegia oxysepala HOM05D006284 ORTHO05D007793 6.0e-50 201.1 138 69.6
Dinv03613 Davidia involucrata HOM05D006284 ORTHO05D007793 6.6e-49 197.6 139 66.9
Aa31sc281G30 Aethionema arabicum HOM05D006284 ORTHO05D007793 8.7e-49 197.2 136 69.9
QL01p032751 Quercus lobata HOM05D006284 ORTHO05D007793 1.1e-48 196.8 142 66.2
Rhsim01G0226200 Rhododendron simsii HOM05D006284 ORTHO05D007793 1.9e-48 196.1 145 64.8
PGR102G0171 Punica granatum HOM05D006284 ORTHO05D007793 2.5e-48 195.7 142 65.5
DCAR_015613 Daucus carota HOM05D006284 ORTHO05D007793 5.6e-48 194.5 140 68.6
Actinidia33860 Actinidia chinensis HOM05D006284 ORTHO05D007793 9.6e-48 193.7 132 68.2
Cpa.g.sc190.6 Carica papaya HOM05D006284 ORTHO05D007793 9.6e-48 193.7 142 65.5
FAN11G1150 Fragaria x ananassa HOM05D006284 ORTHO05D007793 9.6e-48 193.7 139 67.6
FAN21G0749 Fragaria x ananassa HOM05D006284 ORTHO05D007793 9.6e-48 193.7 139 67.6
GSVIVG01025000001 Vitis vinifera HOM05D006284 ORTHO05D007793 9.6e-48 193.7 139 66.9
Migut.L00518 Erythranthe guttata HOM05D006284 ORTHO05D007793 1.2e-47 193.4 138 66.7
Prupe.6G080800 Prunus persica HOM05D006284 ORTHO05D007793 1.2e-47 193.4 132 68.9
Hma1.2p1_1897F.1_g306861 Hydrangea macrophylla HOM05D006284 ORTHO05D007793 1.6e-47 193.0 131 69.5
Manes.11G132300 Manihot esculenta HOM05D006284 ORTHO05D007793 1.6e-47 193.0 140 65.7
Nitab4.5_0001304g0050 Nicotiana tabacum HOM05D006284 ORTHO05D007793 1.6e-47 193.0 136 66.2
Oeu041449.2 Olea europaea HOM05D006284 ORTHO05D007793 1.6e-47 193.0 137 65.0
Thhalv10009069m.g Eutrema salsugineum HOM05D006284 ORTHO05D007793 2.1e-47 192.6 130 70.8
A06p04820 Brassica napus HOM05D006284 ORTHO05D007793 2.8e-47 192.2 137 67.2
BraA06t23686Z Brassica rapa HOM05D006284 ORTHO05D007793 2.8e-47 192.2 137 67.2
EL10Ac7g15985 Beta vulgaris HOM05D006284 ORTHO05D007793 4.7e-47 191.4 139 64.7
C05p05670 Brassica napus HOM05D006284 ORTHO05D007793 4.7e-47 191.4 130 68.5
BolC5t29337H Brassica oleracea HOM05D006284 ORTHO05D007793 4.7e-47 191.4 130 68.5
Nitab4.5_0001838g0030 Nicotiana tabacum HOM05D006284 ORTHO05D007793 4.7e-47 191.4 136 65.4
AL1G17850 Arabidopsis lyrata HOM05D006284 ORTHO05D007793 6.2e-47 191.0 130 69.2
CARHR007450 Cardamine hirsuta HOM05D006284 ORTHO05D007793 6.2e-47 191.0 130 70.0
PGSC0003DMG400030315 Solanum tuberosum HOM05D006284 ORTHO05D007793 6.2e-47 191.0 136 66.2
BcaC07g42493 Brassica carinata HOM05D006284 ORTHO05D007793 8.1e-47 190.7 130 69.2
HanXRQChr15g0493271 Helianthus annuus HOM05D006284 ORTHO05D007793 8.1e-47 190.7 136 65.4
RcHm_v2.0_Chr5g0063801 Rosa chinensis HOM05D006284 ORTHO05D007793 8.1e-47 190.7 139 66.9
CAN.G394.47 Capsicum annuum HOM05D006284 ORTHO05D007793 1.1e-46 190.3 137 65.0
Oeu056746.1 Olea europaea HOM05D006284 ORTHO05D007793 1.1e-46 190.3 137 64.2
FAN16G2200 Fragaria x ananassa HOM05D006284 ORTHO05D007793 1.4e-46 189.9 139 66.2
Sed0023805 Sechium edule HOM05D006284 ORTHO05D007793 1.8e-46 189.5 139 61.9
Sopen06g032410 Solanum pennellii HOM05D006284 ORTHO05D007793 1.8e-46 189.5 136 65.4
Carub.0001s0699 Capsella rubella HOM05D006284 ORTHO05D007793 2.4e-46 189.1 130 68.5
PSO339G4936 Papaver somniferum HOM05D006284 ORTHO05D007793 2.4e-46 189.1 141 66.0
AT1G07645 Arabidopsis thaliana HOM05D006284 ORTHO05D007793 3.1e-46 188.7 130 68.5
ClCG02G020310 Citrullus lanatus HOM05D006284 ORTHO05D007793 3.1e-46 188.7 139 62.6
Solyc06g075990.4 Solanum lycopersicum HOM05D006284 ORTHO05D007793 3.1e-46 188.7 135 65.2
Medtr4g063500 Medicago truncatula HOM05D006284 ORTHO05D007793 4.0e-46 188.3 141 66.0
arahy.Tifrunner.gnm1.ann1.6H51DS Arachis hypogaea HOM05D006284 ORTHO05D007793 5.2e-46 188.0 142 63.4
arahy.Tifrunner.gnm1.ann1.W3SBYC Arachis hypogaea HOM05D006284 ORTHO05D007793 5.2e-46 188.0 142 63.4
BcaC07g41981 Brassica carinata HOM05D006284 ORTHO05D007793 5.2e-46 188.0 130 69.2
BcaC07g42491 Brassica carinata HOM05D006284 ORTHO05D007793 5.2e-46 188.0 130 69.2
A09p66230 Brassica napus HOM05D006284 ORTHO05D007793 5.2e-46 188.0 130 68.5
C08p50410 Brassica napus HOM05D006284 ORTHO05D007793 5.2e-46 188.0 130 69.2
BolC8t52569H Brassica oleracea HOM05D006284 ORTHO05D007793 5.2e-46 188.0 130 69.2
MSTRG.15272 Avicennia marina HOM05D006284 ORTHO05D007793 1.2e-45 186.8 136 66.2
Sp1g06380 Schrenkiella parvula HOM05D006284 ORTHO05D007793 1.2e-45 186.8 130 67.7
Phvul.011G065500 Phaseolus vulgaris HOM05D006284 ORTHO05D007793 1.5e-45 186.4 139 64.7
BraA09t41961Z Brassica rapa HOM05D006284 ORTHO05D007793 2.0e-45 186.0 130 67.7
Os03g0277500 Oryza sativa ssp. japonica HOM05D006284 ORTHO05D007793 2.0e-45 186.0 138 65.2
VMungo1127G1430 Vigna mungo HOM05D006284 ORTHO05D007793 2.0e-45 186.0 139 64.0
AUR62009602 Chenopodium quinoa HOM05D006284 ORTHO05D007793 4.4e-45 184.9 139 64.0
Lsat_1_v5_gn_5_183840 Lactuca sativa HOM05D006284 ORTHO05D007793 4.4e-45 184.9 136 66.2
Lsat_1_v5_gn_9_22581 Lactuca sativa HOM05D006284 ORTHO05D007793 5.8e-45 184.5 138 65.2
CANSAT54G2008 Cannabis sativa HOM05D006284 ORTHO05D007793 7.6e-45 184.1 139 61.2
MELO3C013690.2 Cucumis melo HOM05D006284 ORTHO05D007793 7.6e-45 184.1 139 60.4
CsaV3_6G017010 Cucumis sativus L. HOM05D006284 ORTHO05D007793 7.6e-45 184.1 139 61.2
Gohir.A05G097100 Gossypium hirsutum HOM05D006284 ORTHO05D007793 7.6e-45 184.1 143 62.2
PSO384G0339 Papaver somniferum HOM05D006284 ORTHO05D007793 9.9e-45 183.7 141 64.5
Peaxi162Scf00679g00212 Petunia axillaris HOM05D006284 ORTHO05D007793 9.9e-45 183.7 137 62.0
TAR623G0100 Trochodendron aralioides HOM05D006284 ORTHO05D007793 9.9e-45 183.7 136 64.7
ECA247G3393 Erigeron canadensis HOM05D006284 ORTHO05D007793 1.3e-44 183.3 136 65.4
COL.COLO4_18479 Corchorus olitorius HOM05D006284 ORTHO05D007793 1.7e-44 183.0 137 65.0
Eucgr.B02382 Eucalyptus grandis HOM05D006284 ORTHO05D007793 1.7e-44 183.0 136 63.2
Glyma.12G064500 Glycine max HOM05D006284 ORTHO05D007793 1.7e-44 183.0 139 63.3
Gorai.009G100800 Gossypium raimondii HOM05D006284 ORTHO05D007793 1.7e-44 183.0 143 61.5
Sc06g0008270 Simmondsia chinensis HOM05D006284 ORTHO05D007793 1.7e-44 183.0 131 64.1
Migut.L00567 Erythranthe guttata HOM05D006284 ORTHO05D007793 2.2e-44 182.6 129 67.4
Lalb_Chr01g0003741 Lupinus albus HOM05D006284 ORTHO05D007793 4.9e-44 181.4 141 65.2
Thecc.09G324900 Theobroma cacao HOM05D006284 ORTHO05D007793 4.9e-44 181.4 137 64.2
Ca_19180_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 8.4e-44 180.6 140 62.9
Ca_31183_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 8.4e-44 180.6 140 62.9
Duzib168G1259 Durio zibethinus HOM05D006284 ORTHO05D007793 8.4e-44 180.6 143 60.1
BcaC07g42490 Brassica carinata HOM05D006284 ORTHO05D007793 1.9e-43 179.5 131 67.9
AUR62001816 Chenopodium quinoa HOM05D006284 ORTHO05D007793 1.9e-43 179.5 131 65.6
Psat7g217680 Pisum sativum HOM05D006284 ORTHO05D007793 1.9e-43 179.5 140 63.6
Lj3g0026697 Lotus japonicus HOM05D006284 ORTHO05D007793 7.1e-43 177.6 136 63.2
SalBow5G5166 Salvia bowleyana HOM05D006284 ORTHO05D007793 1.2e-42 176.8 136 62.5
Gohir.D05G097250 Gossypium hirsutum HOM05D006284 ORTHO05D007793 3.5e-42 175.3 143 58.7
THA.LOC104800652 Tarenaya hassleriana HOM05D006284 ORTHO05D007793 4.6e-42 174.9 140 60.0
SGA_v2.0_scaffold606G53170 Striga asiatica HOM05D006284 ORTHO05D007793 6.6e-41 171.0 131 62.6
Zm00001eb012550 Zea mays HOM05D006284 ORTHO05D007793 1.1e-40 170.2 132 59.1
TWI79G0071 Tripterygium wilfordii HOM05D006284 ORTHO05D007793 3.4e-37 158.7 141 60.3
Ciclev10029580m.g Citrus clementina HOM05D006284 ORTHO05D007793 3.0e-33 145.6 115 60.9
SMO165G0091 Selaginella moellendorffii HOM05D006284 ORTHO05D007793 6.7e-33 144.4 133 49.6
Mapoly0004s0146 Marchantia polymorpha HOM05D006284 ORTHO05D007793 8.7e-33 144.1 128 56.2
Gohir.A07G096400 Gossypium hirsutum HOM05D006284 ORTHO05D007793 3.3e-32 142.1 161 49.7
Gorai.001G108700 Gossypium raimondii HOM05D006284 ORTHO05D007793 1.6e-31 139.8 141 51.8
Oeu033642.1 Olea europaea HOM05D006284 ORTHO05D007793 2.1e-31 139.4 102 64.7
Lj2A1058T40 Lonicera japonica HOM05D006284 ORTHO05D007793 2.8e-31 139.0 97 67.0
Gohir.D07G100800 Gossypium hirsutum HOM05D006284 ORTHO05D007793 1.8e-30 136.3 163 46.6
MBI14_g11686_MAGBIO Magnolia biondii HOM05D006284 ORTHO05D007793 1.2e-29 133.7 138 50.7
Oeu056758.1 Olea europaea HOM05D006284 ORTHO05D007793 1.5e-29 133.3 107 61.7
FvH4_3g35580 Fragaria vesca HOM05D006284 ORTHO05D007793 5.8e-29 131.3 139 53.2
CSS0000036 Camellia sinensis var. sinensis HOM05D006284 ORTHO05D007793 7.6e-29 131.0 142 49.3
DCAR_018897 Daucus carota HOM05D006284 ORTHO05D007793 1.1e-27 127.1 100 63.0
Oeu056739.1 Olea europaea HOM05D006284 ORTHO05D007793 4.6e-26 121.7 137 45.3
Oeu056743.1 Olea europaea HOM05D006284 ORTHO05D007793 6.0e-26 121.3 98 57.1
FAN11G3292 Fragaria x ananassa HOM05D006284 ORTHO05D007793 1.8e-25 119.8 141 49.6
TPR.G10205 Trifolium pratense HOM05D006284 ORTHO05D007793 1.8e-25 119.8 94 63.8
SEGI_15500 Sequoiadendron giganteum HOM05D006284 ORTHO05D007793 2.2e-20 102.8 98 54.1
Peaxi162Scf00406g00314 Petunia axillaris HOM05D006284 ORTHO05D007793 4.2e-19 98.6 138 39.9
AagrBONN_evm.TU.Sc2ySwM_344.4820 Anthoceros agrestis HOM05D006284 ORTHO05D007793 1.6e-18 96.7 97 50.5
AagrBONN_evm.TU.Sc2ySwM_117.384 Anthoceros agrestis HOM05D006284 ORTHO05D007793 6.0e-18 94.7 129 38.0
MD07G1053700 Malus domestica HOM05D006284 ORTHO05D007793 2.3e-17 92.8 60 71.7
Pp3c19_1590 Physcomitrium patens HOM05D006284 ORTHO05D007793 2.3e-17 92.8 129 37.2
MD14G1025700 Malus domestica HOM05D006284 ORTHO05D007793 5.7e-16 88.2 60 66.7
AagrBONN_evm.TU.Sc2ySwM_344.4822 Anthoceros agrestis HOM05D018382 ORTHO05D001873 9.7e-16 87.4 110 42.7
CANSAT21G1079 Cannabis sativa HOM05D002411 ORTHO05D002564 3.1e-14 82.4 60 63.3
FvH4_3g35610 Fragaria vesca HOM05D006284 ORTHO05D007793 2.6e-13 79.3 139 36.0
Cc01_g12610 Coffea canephora HOM05D006284 ORTHO05D007793 4.2e-11 72.0 43 74.4
TPR.G10968 Trifolium pratense HOM05D006284 ORTHO05D007793 8.8e-09 64.3 44 65.9
ATR0559G308 Amborella trichopoda HOM05D006284 ORTHO05D007793 1.3e-07 60.5 37 70.3


User provided reference genes

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