Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI00890 Sapria himalayana HOM05D000522 ORTHO05D019803 8.3e-39 163.3 87 100.0
CDE09G1363 Ceratophyllum demersum HOM05D000522 ORTHO05D000565 3.3e-11 71.6 56 67.9
Lj6g0007091 Lotus japonicus HOM05D000522 ORTHO05D000565 4.3e-11 71.2 59 71.2
Cpa.g.sc50.16 Carica papaya HOM05D000522 ORTHO05D019803 1.3e-10 69.7 52 75.0
Manes.01G130500 Manihot esculenta HOM05D000522 ORTHO05D000565 1.3e-10 69.7 52 75.0
GSVIVG01020843001 Vitis vinifera HOM05D000522 ORTHO05D000565 1.3e-10 69.7 58 63.8
Glyma.08G307800 Glycine max HOM05D000522 ORTHO05D000565 1.6e-10 69.3 61 62.3
MBI07_g26368_MAGBIO Magnolia biondii HOM05D000522 ORTHO05D000565 1.6e-10 69.3 62 59.7
Cc05_g09740 Coffea canephora HOM05D000522 ORTHO05D000565 2.1e-10 68.9 60 65.0
SGA_v2.0_scaffold70G23606 Striga asiatica HOM05D000522 ORTHO05D000565 2.1e-10 68.9 54 70.4
CDE02G2389 Ceratophyllum demersum HOM05D000522 ORTHO05D000565 2.8e-10 68.6 56 66.1
TAR624G1404 Trochodendron aralioides HOM05D000522 ORTHO05D000565 3.6e-10 68.2 62 61.3
CSS0005588 Camellia sinensis var. sinensis HOM05D000522 ORTHO05D000565 6.2e-10 67.4 52 71.2
ClCG11G016500 Citrullus lanatus HOM05D000522 ORTHO05D000565 6.2e-10 67.4 52 71.2
MELO3C026972.2 Cucumis melo HOM05D000522 ORTHO05D000565 6.2e-10 67.4 52 69.2
Nn3g20707 Nelumbo nucifera HOM05D000522 ORTHO05D000565 1.1e-09 66.6 52 71.2
Potri.002G057700 Populus trichocarpa HOM05D000522 ORTHO05D000565 1.1e-09 66.6 52 73.1
Cfa023074 Carpinus fangiana HOM05D000522 ORTHO05D000565 1.4e-09 66.2 52 71.2
Haze_13533 Corylus avellana HOM05D000522 ORTHO05D000565 1.4e-09 66.2 52 71.2
Sabra02G0047000 Salix brachista HOM05D000522 ORTHO05D000565 1.4e-09 66.2 52 73.1
CANSAT64G1705 Cannabis sativa HOM05D000522 ORTHO05D000565 1.8e-09 65.9 58 65.5
CsaV3_4G031950 Cucumis sativus L. HOM05D000522 ORTHO05D000565 1.8e-09 65.9 52 67.3
Lalb_Chr07g0193551 Lupinus albus HOM05D000522 ORTHO05D000565 1.8e-09 65.9 61 62.3
PGR142G1286 Punica granatum HOM05D000522 ORTHO05D000565 1.8e-09 65.9 52 69.2
SalBow7G3692 Salvia bowleyana HOM05D000522 ORTHO05D000565 1.8e-09 65.9 52 69.2
DCAR_009815 Daucus carota HOM05D000522 ORTHO05D000565 2.4e-09 65.5 52 67.3
HPP92_023283 Vanilla planifolia HOM05D000522 ORTHO05D000565 2.4e-09 65.5 57 59.6
Ah.01g013610 Amaranthus hybridus HOM05D000522 ORTHO05D000565 3.1e-09 65.1 70 51.4
Phvul.006G022500 Phaseolus vulgaris HOM05D000522 ORTHO05D000565 3.1e-09 65.1 57 59.6
Glyma.18G109900 Glycine max HOM05D000522 ORTHO05D000565 4.0e-09 64.7 59 57.6
MD09G1149500 Malus domestica HOM05D000522 ORTHO05D000565 4.0e-09 64.7 57 63.2
QL08p044908 Quercus lobata HOM05D000522 ORTHO05D000565 4.0e-09 64.7 52 67.3
FvH4_6g38591 Fragaria vesca HOM05D000522 ORTHO05D000565 5.3e-09 64.3 59 62.7
arahy.Tifrunner.gnm1.ann1.52U0T8 Arachis hypogaea HOM05D000522 ORTHO05D000565 6.9e-09 63.9 59 59.3
Aqoxy1G01731 Aquilegia oxysepala HOM05D000522 ORTHO05D000565 9.0e-09 63.5 57 61.4
Prupe.3G176700 Prunus persica HOM05D000522 ORTHO05D000565 9.0e-09 63.5 54 66.7
Prupe.3G176900 Prunus persica HOM05D000522 ORTHO05D000565 9.0e-09 63.5 54 66.7
TAR626G0425 Trochodendron aralioides HOM05D000522 ORTHO05D000565 9.0e-09 63.5 52 65.4
VMungo0540G0546 Vigna mungo HOM05D000522 ORTHO05D000565 9.0e-09 63.5 57 59.6
Gorai.007G173500 Gossypium raimondii HOM05D000522 ORTHO05D000565 1.2e-08 63.2 54 63.0
Sed0003185 Sechium edule HOM05D000522 ORTHO05D000565 1.2e-08 63.2 47 70.2
MBI15_g28290_MAGBIO Magnolia biondii HOM05D000522 ORTHO05D019803 1.5e-08 62.8 59 57.6
RcHm_v2.0_Chr2g0152011 Rosa chinensis HOM05D000522 ORTHO05D000565 1.5e-08 62.8 59 62.7
FAN02G1249 Fragaria x ananassa HOM05D000522 ORTHO05D000565 2.0e-08 62.4 53 66.0
Nitab4.5_0003734g0070 Nicotiana tabacum HOM05D000522 ORTHO05D000565 2.0e-08 62.4 51 60.8
Migut.M00557 Erythranthe guttata HOM05D000522 ORTHO05D000565 2.6e-08 62.0 52 63.5
FAN14G4016 Fragaria x ananassa HOM05D000522 ORTHO05D000565 2.6e-08 62.0 59 61.0
Sc06g0007720 Simmondsia chinensis HOM05D000522 ORTHO05D000565 2.6e-08 62.0 51 70.6
vmacro09193 Vaccinium macrocarpon HOM05D000522 ORTHO05D000565 2.6e-08 62.0 52 65.4
Aa31LG1G7920 Aethionema arabicum HOM05D000522 ORTHO05D000565 3.4e-08 61.6 58 60.3
arahy.Tifrunner.gnm1.ann1.29T18D Arachis hypogaea HOM05D000522 ORTHO05D019803 3.4e-08 61.6 52 63.5
MSTRG.6738 Avicennia marina HOM05D000522 ORTHO05D000565 3.4e-08 61.6 54 61.1
Ca_14597_v3 Cicer arietinum L. HOM05D000522 ORTHO05D000565 3.4e-08 61.6 59 61.0
FAN09G2138 Fragaria x ananassa HOM05D001706 ORTHO05D001789 4.4e-08 61.2 59 61.0
Thecc.01G173000 Theobroma cacao HOM05D000522 ORTHO05D000565 4.4e-08 61.2 50 68.0
CiPaw.04G138500 Carya illinoinensis HOM05D000522 ORTHO05D000565 5.8e-08 60.8 52 65.4
Duzib138G1659 Durio zibethinus HOM05D000522 ORTHO05D000565 5.8e-08 60.8 53 66.0
Gohir.D11G162900 Gossypium hirsutum HOM05D000522 ORTHO05D000565 5.8e-08 60.8 51 64.7
COL.COLO4_33761 Corchorus olitorius HOM05D000522 ORTHO05D000565 7.6e-08 60.5 51 66.7
Solyc06g054520.2 Solanum lycopersicum HOM05D000522 ORTHO05D000565 9.9e-08 60.1 53 54.7
CAN.G164.16 Capsicum annuum HOM05D000522 ORTHO05D000565 1.3e-07 59.7 52 55.8
ATR1158G035 Amborella trichopoda HOM05D000522 ORTHO05D000565 1.7e-07 59.3 63 52.4
BcaC07g36813 Brassica carinata HOM05D000522 ORTHO05D000565 1.7e-07 59.3 52 65.4
C08p02640 Brassica napus HOM05D000522 ORTHO05D000565 1.7e-07 59.3 52 65.4
BolC8t47060H Brassica oleracea HOM05D000522 ORTHO05D000565 1.7e-07 59.3 52 65.4
Eucgr.K01223 Eucalyptus grandis HOM05D000522 ORTHO05D000565 1.7e-07 59.3 58 55.2
Gohir.A11G155933 Gossypium hirsutum HOM05D000522 ORTHO05D000565 1.7e-07 59.3 51 62.7
Sp1g05310 Schrenkiella parvula HOM05D000522 ORTHO05D000565 1.7e-07 59.3 53 64.2
AUR62015133 Chenopodium quinoa HOM05D000522 ORTHO05D000565 2.2e-07 58.9 51 64.7
Solyc12g011160.2 Solanum lycopersicum HOM05D000522 ORTHO05D000565 2.2e-07 58.9 52 55.8
Sopen12g006520 Solanum pennellii HOM05D000522 ORTHO05D000565 2.2e-07 58.9 52 55.8
TPR.G25259 Trifolium pratense HOM05D000522 ORTHO05D000565 2.2e-07 58.9 52 61.5
Atru.chr6.2054 Acer truncatum HOM05D000522 ORTHO05D000565 2.9e-07 58.5 52 61.5
HanXRQChr08g0208981 Helianthus annuus HOM05D000522 ORTHO05D000565 2.9e-07 58.5 52 61.5
AUR62017594 Chenopodium quinoa HOM05D000522 ORTHO05D000565 3.8e-07 58.2 51 64.7
A08p35930 Brassica napus HOM05D000522 ORTHO05D000565 4.9e-07 57.8 52 65.4
BraA08t35500Z Brassica rapa HOM05D000522 ORTHO05D000565 4.9e-07 57.8 52 65.4
Rhsim04G0081400 Rhododendron simsii HOM05D000522 ORTHO05D000565 4.9e-07 57.8 47 70.2
TWI23G0080 Tripterygium wilfordii HOM05D000522 ORTHO05D000565 4.9e-07 57.8 52 61.5
BcaB03g13415 Brassica carinata HOM05D000522 ORTHO05D000565 6.4e-07 57.4 52 63.5
ECA233G4826 Erigeron canadensis HOM05D000522 ORTHO05D000565 6.4e-07 57.4 52 57.7
MBI15_g15738_MAGBIO Magnolia biondii HOM05D000479 ORTHO05D019803 6.4e-07 57.4 47 66.0
Medtr3g046330 Medicago truncatula HOM05D000522 ORTHO05D000565 6.4e-07 57.4 50 60.0
Peaxi162Scf00122g02215 Petunia axillaris HOM05D000522 ORTHO05D000565 6.4e-07 57.4 48 60.4
Psat5g197360 Pisum sativum HOM05D000522 ORTHO05D000565 6.4e-07 57.4 52 57.7
PGSC0003DMG400007849 Solanum tuberosum HOM05D000522 ORTHO05D000565 6.4e-07 57.4 52 53.8
EL10Ac9g22842 Beta vulgaris HOM05D000522 ORTHO05D000565 8.4e-07 57.0 51 64.7
SEGI_00592 Sequoiadendron giganteum HOM05D000522 ORTHO05D019803 8.4e-07 57.0 52 61.5
Zm00001eb153460 Zea mays HOM05D000522 ORTHO05D000565 8.4e-07 57.0 52 53.8
Thhalv10007893m.g Eutrema salsugineum HOM05D000522 ORTHO05D000565 1.4e-06 56.2 51 64.7
Lsat_1_v5_gn_8_159361 Lactuca sativa HOM05D000522 ORTHO05D000565 1.4e-06 56.2 63 50.8
Hund24232 Selenicereus undatus HOM05D000522 ORTHO05D000565 1.4e-06 56.2 51 62.7
Os01g0752200 Oryza sativa ssp. japonica HOM05D000522 ORTHO05D000565 1.9e-06 55.8 56 51.8
SEGI_24278 Sequoiadendron giganteum HOM05D000522 ORTHO05D000565 2.4e-06 55.5 52 55.8
THA.LOC104826239 Tarenaya hassleriana HOM05D000522 ORTHO05D000565 2.4e-06 55.5 58 62.1
TWI59G1332 Tripterygium wilfordii HOM05D000522 ORTHO05D000565 2.4e-06 55.5 53 62.3
AT1G06550 Arabidopsis thaliana HOM05D000522 ORTHO05D000565 3.2e-06 55.1 51 62.7
Carub.0001s0592 Capsella rubella HOM05D000522 ORTHO05D000565 3.2e-06 55.1 58 56.9
Peaxi162Scf00033g01515 Petunia axillaris HOM05D000522 ORTHO05D000565 3.2e-06 55.1 54 51.9
Peaxi162Scf00047g02336 Petunia axillaris HOM05D000522 ORTHO05D000565 3.2e-06 55.1 51 54.9
unitig_62.g23102 Utricularia gibba HOM05D000522 ORTHO05D000565 4.2e-06 54.7 57 49.1
arahy.Tifrunner.gnm1.ann1.M3YU8S Arachis hypogaea HOM05D000522 ORTHO05D000565 5.4e-06 54.3 42 69.0
Sopen06g019590 Solanum pennellii HOM05D000522 ORTHO05D000565 5.4e-06 54.3 51 52.9
AL1G16580 Arabidopsis lyrata HOM05D000522 ORTHO05D000565 9.3e-06 53.5 58 53.4
CARHR006160 Cardamine hirsuta HOM05D000522 ORTHO05D000565 9.3e-06 53.5 51 62.7
Peaxi162Scf00374g00114 Petunia axillaris HOM05D000522 ORTHO05D000565 9.3e-06 53.5 54 50.0


User provided reference genes

Program Settings