Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI00883 Sapria himalayana HOM05D002439 ORTHO05D002650 1.8e-142 509.2 252 100.0
Haze_13343 Corylus avellana HOM05D002439 ORTHO05D002650 3.1e-17 93.2 79 59.5
arahy.Tifrunner.gnm1.ann1.DQDZ84 Arachis hypogaea HOM05D002439 ORTHO05D002650 4.4e-16 89.4 88 58.0
Sabra13G0100200 Salix brachista HOM05D002439 ORTHO05D002650 9.8e-16 88.2 81 56.8
Sabra19G0104100 Salix brachista HOM05D002439 ORTHO05D002650 9.2e-14 81.6 84 53.6
Sabra19G0100700 Salix brachista HOM05D002439 ORTHO05D002650 1.3e-12 77.8 89 49.4
Zm00001eb338460 Zea mays HOM05D002439 ORTHO05D002650 1.3e-12 77.8 83 50.6
QL08p041339 Quercus lobata HOM05D002439 ORTHO05D002650 4.3e-11 72.8 105 43.8
MBI07_g17047_MAGBIO Magnolia biondii HOM05D002439 ORTHO05D002650 2.1e-10 70.5 75 56.0
CANSAT35G1245 Cannabis sativa HOM05D002439 ORTHO05D002650 4.0e-09 66.2 39 76.9
Prupe.4G058200 Prunus persica HOM05D002439 ORTHO05D002650 4.0e-09 66.2 39 76.9
MD05G1304200 Malus domestica HOM05D002439 ORTHO05D002650 6.8e-09 65.5 39 71.8
MD10G1283600 Malus domestica HOM05D002439 ORTHO05D002650 6.8e-09 65.5 39 71.8
Lalb_Chr20g0121301 Lupinus albus HOM05D002439 ORTHO05D002650 1.2e-08 64.7 39 79.5
CSS0010712 Camellia sinensis var. sinensis HOM05D002439 ORTHO05D002650 2.6e-08 63.5 43 67.4
vmacro15962 Vaccinium macrocarpon HOM05D002439 ORTHO05D002650 4.4e-08 62.8 39 76.9
Hma1.2p1_0155F.1_g068350 Hydrangea macrophylla HOM05D002439 ORTHO05D002650 5.8e-08 62.4 43 69.8
TWI63G1494 Tripterygium wilfordii HOM05D002439 ORTHO05D002650 5.8e-08 62.4 39 69.2
GSVIVG01021183001 Vitis vinifera HOM05D000001 ORTHO05D008780 7.6e-08 62.0 36 80.6
Dinv03919 Davidia involucrata HOM05D002439 ORTHO05D002650 9.9e-08 61.6 44 70.5
CiPaw.10G057300 Carya illinoinensis HOM05D002439 ORTHO05D002650 1.3e-07 61.2 39 66.7
Ciclev10017362m.g Citrus clementina HOM05D002439 ORTHO05D002650 1.3e-07 61.2 36 83.3
Glyma.13G231900 Glycine max HOM05D002439 ORTHO05D002650 1.3e-07 61.2 37 73.0
TWI14G0466 Tripterygium wilfordii HOM05D002439 ORTHO05D002650 1.3e-07 61.2 36 86.1
Dinv15465 Davidia involucrata HOM05D002439 ORTHO05D002650 1.7e-07 60.8 40 77.5
Duzib160G0435 Durio zibethinus HOM05D002439 ORTHO05D002650 1.7e-07 60.8 44 70.5
Solyc10g008730.3 Solanum lycopersicum HOM05D002439 ORTHO05D002650 1.7e-07 60.8 41 70.7
Sopen10g004500 Solanum pennellii HOM05D002439 ORTHO05D002650 1.7e-07 60.8 41 70.7
PGSC0003DMG400026623 Solanum tuberosum HOM05D002439 ORTHO05D002650 1.7e-07 60.8 41 70.7
Nitab4.5_0012054g0010 Nicotiana tabacum HOM05D002439 ORTHO05D002650 2.2e-07 60.5 43 69.8
PSO541G4514 Papaver somniferum HOM05D002439 ORTHO05D002650 2.2e-07 60.5 39 74.4
GSVIVG01020672001 Vitis vinifera HOM05D002439 ORTHO05D002650 2.9e-07 60.1 37 78.4
Thhalv10017452m.g Eutrema salsugineum HOM05D002439 ORTHO05D002650 3.7e-07 59.7 45 68.9
Sc21g0003850 Simmondsia chinensis HOM05D002439 ORTHO05D002650 3.7e-07 59.7 45 68.9
TWI59G0606 Tripterygium wilfordii HOM05D002439 ORTHO05D002650 3.7e-07 59.7 36 80.6
Lj1E686T0 Lonicera japonica HOM05D002439 ORTHO05D002650 4.9e-07 59.3 36 77.8
Lj1E689T0 Lonicera japonica HOM05D002439 ORTHO05D002650 4.9e-07 59.3 36 77.8
Rhsim06G0133400 Rhododendron simsii HOM05D002439 ORTHO05D002650 4.9e-07 59.3 37 67.6
Lalb_Chr24g0400051 Lupinus albus HOM05D002439 ORTHO05D002650 6.4e-07 58.9 36 77.8
RcHm_v2.0_Chr5g0010171 Rosa chinensis HOM05D002439 ORTHO05D002650 6.4e-07 58.9 39 71.8
Hund00982 Selenicereus undatus HOM05D002439 ORTHO05D002650 6.4e-07 58.9 37 75.7
ClCG09G011370 Citrullus lanatus HOM05D002439 ORTHO05D002650 8.3e-07 58.5 36 77.8
FAN11G2819 Fragaria x ananassa HOM05D002439 ORTHO05D008780 8.3e-07 58.5 42 64.3
FAN16G0755 Fragaria x ananassa HOM05D002439 ORTHO05D008780 8.3e-07 58.5 42 64.3
Lsat_1_v5_gn_4_27781 Lactuca sativa HOM05D002439 ORTHO05D002650 8.3e-07 58.5 36 77.8
Medtr4g079680 Medicago truncatula HOM05D002439 ORTHO05D002650 8.3e-07 58.5 36 80.6
PGR142G3273 Punica granatum HOM05D002439 ORTHO05D002650 8.3e-07 58.5 37 75.7
Thecc.06G174500 Theobroma cacao HOM05D002439 ORTHO05D002650 8.3e-07 58.5 44 70.5
TPR.G11783 Trifolium pratense HOM05D001155 ORTHO05D001080 8.3e-07 58.5 39 69.2
Actinidia23655 Actinidia chinensis HOM05D002439 ORTHO05D002650 1.1e-06 58.2 39 69.2
arahy.Tifrunner.gnm1.ann1.668WW2 Arachis hypogaea HOM05D002439 ORTHO05D002650 1.1e-06 58.2 41 61.0
arahy.Tifrunner.gnm1.ann1.P3ZWTW Arachis hypogaea HOM05D002439 ORTHO05D002650 1.1e-06 58.2 41 61.0
CSS0008217 Camellia sinensis var. sinensis HOM05D002439 ORTHO05D002650 1.1e-06 58.2 36 75.0
CSS0038402 Camellia sinensis var. sinensis HOM05D002439 ORTHO05D002650 1.1e-06 58.2 36 80.6
CiPaw.03G185900 Carya illinoinensis HOM05D002439 ORTHO05D002650 1.1e-06 58.2 36 77.8
MELO3C014353.2 Cucumis melo HOM05D002439 ORTHO05D002650 1.1e-06 58.2 36 80.6
Duzib264G1300 Durio zibethinus HOM05D002439 ORTHO05D002650 1.1e-06 58.2 43 67.4
Gohir.A10G154100 Gossypium hirsutum HOM05D002439 ORTHO05D002650 1.1e-06 58.2 43 67.4
Gohir.D10G112000 Gossypium hirsutum HOM05D002439 ORTHO05D002650 1.1e-06 58.2 43 67.4
Gorai.011G123800 Gossypium raimondii HOM05D002439 ORTHO05D002650 1.1e-06 58.2 43 67.4
HanXRQChr16g0526231 Helianthus annuus HOM05D002439 ORTHO05D002650 1.1e-06 58.2 36 75.0
arahy.Tifrunner.gnm1.ann1.4PQ52P Arachis hypogaea HOM05D002439 ORTHO05D002650 1.4e-06 57.8 41 58.5
CSS0014872 Camellia sinensis var. sinensis HOM05D002439 ORTHO05D002650 1.4e-06 57.8 39 74.4
CSS0024442 Camellia sinensis var. sinensis HOM05D002439 ORTHO05D002650 1.4e-06 57.8 39 74.4
Manes.16G036300 Manihot esculenta HOM05D002439 ORTHO05D002650 1.4e-06 57.8 41 68.3
Medtr2g015540 Medicago truncatula HOM05D002439 ORTHO05D002650 1.4e-06 57.8 39 66.7
SalBow7G0011 Salvia bowleyana HOM05D002439 ORTHO05D002650 1.4e-06 57.8 36 75.0
Thecc.01G243900 Theobroma cacao HOM05D002439 ORTHO05D002650 1.4e-06 57.8 43 65.1
CDE08G0976 Ceratophyllum demersum HOM05D002439 ORTHO05D002650 1.9e-06 57.4 41 68.3
CsaV3_6G037590 Cucumis sativus L. HOM05D002439 ORTHO05D002650 1.9e-06 57.4 36 77.8
Duzib187G0907 Durio zibethinus HOM05D002439 ORTHO05D002650 1.9e-06 57.4 43 67.4
FAN21G3542 Fragaria x ananassa HOM05D002439 ORTHO05D002650 1.9e-06 57.4 39 69.2
Lj6g0022423 Lotus japonicus HOM05D002439 ORTHO05D002650 1.9e-06 57.4 41 65.9
Phvul.005G096500 Phaseolus vulgaris HOM05D002439 ORTHO05D002650 1.9e-06 57.4 36 75.0
Potri.019G090500 Populus trichocarpa HOM05D002439 ORTHO05D002650 1.9e-06 57.4 36 77.8
SalBow7G0474 Salvia bowleyana HOM05D002439 ORTHO05D002650 1.9e-06 57.4 43 65.1
unitig_747.g21619 Utricularia gibba HOM05D002439 ORTHO05D002650 1.9e-06 57.4 37 75.7
EL10Ac9g20879 Beta vulgaris HOM05D002439 ORTHO05D002650 2.4e-06 57.0 36 77.8
FAN28G1289 Fragaria x ananassa HOM05D002439 ORTHO05D002650 2.4e-06 57.0 39 66.7
Lj3g0028058 Lotus japonicus HOM05D002439 ORTHO05D002650 2.4e-06 57.0 36 77.8
Phvul.006G177900 Phaseolus vulgaris HOM05D002439 ORTHO05D002650 2.4e-06 57.0 41 61.0
Phvul.011G135700 Phaseolus vulgaris HOM05D002439 ORTHO05D002650 2.4e-06 57.0 36 75.0
DCAR_007970 Daucus carota HOM05D002439 ORTHO05D002650 3.2e-06 56.6 33 72.7
Lj3g0001457 Lotus japonicus HOM05D002439 ORTHO05D002650 3.2e-06 56.6 36 72.2
RcHm_v2.0_Chr2g0128431 Rosa chinensis HOM05D002439 ORTHO05D002650 3.2e-06 56.6 36 75.0
ATR0602G104 Amborella trichopoda HOM05D002439 ORTHO05D002650 4.1e-06 56.2 37 75.7
AL4G26280 Arabidopsis lyrata HOM05D002439 ORTHO05D002650 4.1e-06 56.2 36 80.6
AT2G31090 Arabidopsis thaliana HOM05D002439 ORTHO05D002650 4.1e-06 56.2 36 80.6
CANSAT64G1999 Cannabis sativa HOM05D002439 ORTHO05D002650 4.1e-06 56.2 40 72.5
Carub.0004s1235 Capsella rubella HOM05D002439 ORTHO05D002650 4.1e-06 56.2 36 80.6
FvH4_6g27090 Fragaria vesca HOM05D002439 ORTHO05D002650 4.1e-06 56.2 36 72.2
FAN05G1655 Fragaria x ananassa HOM05D002439 ORTHO05D002650 4.1e-06 56.2 36 72.2
FAN09G4017 Fragaria x ananassa HOM05D002439 ORTHO05D002650 4.1e-06 56.2 36 72.2
FAN14G1604 Fragaria x ananassa HOM05D002439 ORTHO05D002650 4.1e-06 56.2 36 72.2
Glyma.12G122200 Glycine max HOM05D002439 ORTHO05D002650 4.1e-06 56.2 36 77.8
Sed0028107 Sechium edule HOM05D002439 ORTHO05D002650 4.1e-06 56.2 36 75.0
Actinidia10978 Actinidia chinensis HOM05D002439 ORTHO05D002650 5.4e-06 55.8 36 75.0
Cc02_g14480 Coffea canephora HOM05D002439 ORTHO05D002650 5.4e-06 55.8 43 62.8
HanXRQChr16g0526291 Helianthus annuus HOM05D002439 ORTHO05D002650 5.4e-06 55.8 36 80.6
Psat5g275560 Pisum sativum HOM05D002439 ORTHO05D002650 5.4e-06 55.8 36 69.4
Hund07836 Selenicereus undatus HOM05D002439 ORTHO05D002650 5.4e-06 55.8 36 75.0
THA.LOC104826225 Tarenaya hassleriana HOM05D002439 ORTHO05D002650 5.4e-06 55.8 36 77.8
TPR.G11482 Trifolium pratense HOM05D002439 ORTHO05D002650 5.4e-06 55.8 36 72.2
ClCG03G007830 Citrullus lanatus HOM05D002439 ORTHO05D002650 7.1e-06 55.5 38 68.4
Psat1g199640 Pisum sativum HOM05D002439 ORTHO05D002650 7.1e-06 55.5 39 64.1
Psat4g185040 Pisum sativum HOM05D002439 ORTHO05D002650 7.1e-06 55.5 39 64.1
Aa31LG5G5810 Aethionema arabicum HOM05D002439 ORTHO05D002650 9.2e-06 55.1 36 75.0


User provided reference genes

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