Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI00774 Sapria himalayana HOM05D006857 ORTHO05D008679 2.0e-155 552.4 274 100.0
Atru.chr4.1915 Acer truncatum HOM05D006857 ORTHO05D008679 4.6e-75 285.4 274 54.7
Duzib151G0230 Durio zibethinus HOM05D006857 ORTHO05D008679 1.0e-74 284.3 272 54.8
Manes.03G158900 Manihot esculenta HOM05D006857 ORTHO05D008679 1.0e-74 284.3 277 55.6
Cfa014781 Carpinus fangiana HOM05D006857 ORTHO05D008679 1.3e-74 283.9 283 54.4
Potri.008G171900 Populus trichocarpa HOM05D006857 ORTHO05D008679 8.6e-74 281.2 272 54.8
Prupe.1G048100 Prunus persica HOM05D006857 ORTHO05D008679 8.6e-74 281.2 274 54.7
Cpa.g.sc44.1 Carica papaya HOM05D006857 ORTHO05D008679 1.9e-73 280.0 272 54.4
TAR362G0064 Trochodendron aralioides HOM05D006857 ORTHO05D008679 1.9e-73 280.0 274 54.0
CiPaw.02G107000 Carya illinoinensis HOM05D006857 ORTHO05D008679 2.5e-73 279.6 272 55.9
Thecc.04G264000 Theobroma cacao HOM05D006857 ORTHO05D008679 2.5e-73 279.6 272 54.4
arahy.Tifrunner.gnm1.ann1.SJBM1Y Arachis hypogaea HOM05D006857 ORTHO05D008679 5.6e-73 278.5 274 53.3
arahy.Tifrunner.gnm1.ann1.I81STG Arachis hypogaea HOM05D006857 ORTHO05D008679 9.5e-73 277.7 274 53.3
Nn1g02958 Nelumbo nucifera HOM05D006857 ORTHO05D008679 1.6e-72 276.9 274 55.5
Lj6g0000537 Lotus japonicus HOM05D006857 ORTHO05D008679 2.8e-72 276.2 274 52.9
PSO063G2784 Papaver somniferum HOM05D006857 ORTHO05D008679 2.8e-72 276.2 272 54.0
Sabra08G0131200 Salix brachista HOM05D006857 ORTHO05D008679 6.2e-72 275.0 272 54.0
Lalb_Chr03g0036951 Lupinus albus HOM05D006857 ORTHO05D008679 8.1e-72 274.6 274 52.2
MELO3C006377.2 Cucumis melo HOM05D006857 ORTHO05D008679 1.1e-71 274.2 274 52.9
QL06p021004 Quercus lobata HOM05D006857 ORTHO05D008679 1.1e-71 274.2 273 54.2
PSO017G4333 Papaver somniferum HOM05D006857 ORTHO05D008679 6.8e-71 271.6 272 53.3
Sc19g0005530 Simmondsia chinensis HOM05D006857 ORTHO05D008679 8.9e-71 271.2 272 52.6
Gorai.011G177900 Gossypium raimondii HOM05D006857 ORTHO05D008679 1.5e-70 270.4 268 54.1
Ciclev10005032m.g Citrus clementina HOM05D006857 ORTHO05D008679 2.0e-70 270.0 274 52.9
GSVIVG01027915001 Vitis vinifera HOM05D006857 ORTHO05D008679 2.0e-70 270.0 274 53.6
Gohir.D10G158400 Gossypium hirsutum HOM05D006857 ORTHO05D008679 2.6e-70 269.6 268 54.1
RcHm_v2.0_Chr4g0395361 Rosa chinensis HOM05D006857 ORTHO05D008679 2.6e-70 269.6 269 52.4
EL10Ac3g06657 Beta vulgaris HOM05D006857 ORTHO05D008679 5.8e-70 268.5 272 52.6
ClCG05G004000 Citrullus lanatus HOM05D006857 ORTHO05D008679 5.8e-70 268.5 273 52.4
Medtr8g085480 Medicago truncatula HOM05D006857 ORTHO05D008679 5.8e-70 268.5 274 52.6
CANSAT78G0655 Cannabis sativa HOM05D006857 ORTHO05D008679 9.9e-70 267.7 272 51.5
MD16G1226200 Malus domestica HOM05D006857 ORTHO05D008679 9.9e-70 267.7 274 52.9
AUR62015271 Chenopodium quinoa HOM05D006857 ORTHO05D008679 1.3e-69 267.3 271 52.0
CsaV3_3G011690 Cucumis sativus L. HOM05D006857 ORTHO05D008679 1.3e-69 267.3 272 52.6
Glyma.10G132600 Glycine max HOM05D006857 ORTHO05D008679 1.7e-69 266.9 272 50.7
TWI09G0838 Tripterygium wilfordii HOM05D006857 ORTHO05D008679 1.7e-69 266.9 287 50.5
Actinidia35816 Actinidia chinensis HOM05D006857 ORTHO05D008679 2.9e-69 266.2 272 53.3
TPR.G11804 Trifolium pratense HOM05D006857 ORTHO05D008679 2.9e-69 266.2 274 51.1
COL.COLO4_15963 Corchorus olitorius HOM05D006857 ORTHO05D008679 8.3e-69 264.6 229 59.0
FvH4_4g04570 Fragaria vesca HOM05D006857 ORTHO05D008679 1.4e-68 263.8 269 51.7
Hund20529 Selenicereus undatus HOM05D006857 ORTHO05D008679 1.4e-68 263.8 269 52.0
Oeu002936.2 Olea europaea HOM05D006857 ORTHO05D008679 1.9e-68 263.5 272 52.2
MD07G1289900 Malus domestica HOM05D006857 ORTHO05D008679 3.2e-68 262.7 275 52.0
VMungo0720G0849 Vigna mungo HOM05D006857 ORTHO05D008679 3.2e-68 262.7 272 51.5
Phvul.007G231500 Phaseolus vulgaris HOM05D006857 ORTHO05D008679 4.1e-68 262.3 272 50.4
Aqoxy2G03746 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 1.2e-67 260.8 272 51.8
CSS0034732 Camellia sinensis var. sinensis HOM05D006857 ORTHO05D008679 1.6e-67 260.4 274 52.6
Ca_17963_v3 Cicer arietinum L. HOM05D006857 ORTHO05D008679 1.6e-67 260.4 269 50.9
Psat7g076560 Pisum sativum HOM05D006857 ORTHO05D008679 4.6e-67 258.8 275 50.9
FAN17G2805 Fragaria x ananassa HOM05D006857 ORTHO05D008679 6.0e-67 258.5 262 50.8
Migut.G00555 Erythranthe guttata HOM05D006857 ORTHO05D008679 1.0e-66 257.7 270 51.1
Cc03_g06310 Coffea canephora HOM05D006857 ORTHO05D008679 2.3e-66 256.5 272 50.7
Eucgr.H00127 Eucalyptus grandis HOM05D006857 ORTHO05D008679 2.3e-66 256.5 271 52.0
Aqoxy7G02302 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 3.9e-66 255.8 272 51.1
MSTRG.4172 Avicennia marina HOM05D006857 ORTHO05D008679 6.6e-66 255.0 271 52.0
vmacro08554 Vaccinium macrocarpon HOM05D006857 ORTHO05D008679 1.1e-65 254.2 274 51.5
Aqoxy7G02465 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 1.9e-65 253.4 272 51.1
ATR0787G032 Amborella trichopoda HOM05D006857 ORTHO05D008679 7.3e-65 251.5 279 49.1
Haze_11458 Corylus avellana HOM05D006857 ORTHO05D008679 9.5e-65 251.1 242 55.8
HanXRQChr06g0182801 Helianthus annuus HOM05D006857 ORTHO05D008679 2.1e-64 250.0 277 48.4
DCAR_002298 Daucus carota HOM05D004684 ORTHO05D006904 1.1e-63 247.7 272 47.8
Rhsim04G0172300 Rhododendron simsii HOM05D006857 ORTHO05D008679 1.8e-63 246.9 269 50.6
PGR031G1141 Punica granatum HOM05D006857 ORTHO05D008679 6.8e-63 245.0 276 51.4
PGR031G1585 Punica granatum HOM05D006857 ORTHO05D008679 6.8e-63 245.0 276 51.4
CAN.G524.29 Capsicum annuum HOM05D006857 ORTHO05D008679 1.2e-62 244.2 274 47.1
Hma1.2p1_0112F.1_g054740 Hydrangea macrophylla HOM05D006857 ORTHO05D008679 1.5e-62 243.8 272 50.7
Ah.04g153670 Amaranthus hybridus HOM05D006857 ORTHO05D008679 2.0e-62 243.4 269 48.7
Sed0022275 Sechium edule HOM05D006857 ORTHO05D008679 1.3e-61 240.7 246 52.0
Nitab4.5_0000194g0200 Nicotiana tabacum HOM05D006857 ORTHO05D008679 6.4e-61 238.4 272 46.0
Aa31LG9G4440 Aethionema arabicum HOM05D006857 ORTHO05D008679 3.2e-60 236.1 272 49.3
AUR62018068 Chenopodium quinoa HOM05D006857 ORTHO05D008679 3.2e-60 236.1 253 49.4
MBI10_g35430_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 3.2e-60 236.1 275 49.1
SalBow3G1529 Salvia bowleyana HOM05D006857 ORTHO05D008679 4.1e-60 235.7 266 46.6
Dinv27112 Davidia involucrata HOM05D006857 ORTHO05D008679 5.4e-60 235.3 265 50.6
Lj6C621T18 Lonicera japonica HOM05D006857 ORTHO05D008679 7.1e-60 235.0 296 45.9
Nitab4.5_0013063g0010 Nicotiana tabacum HOM05D006857 ORTHO05D008679 7.1e-60 235.0 272 46.7
Peaxi162Scf00153g01846 Petunia axillaris HOM05D006857 ORTHO05D008679 1.2e-59 234.2 276 46.0
PGSC0003DMG400017145 Solanum tuberosum HOM05D006857 ORTHO05D008679 1.2e-59 234.2 273 46.9
SGA_v2.0_scaffold67G22686 Striga asiatica HOM05D006857 ORTHO05D008679 2.7e-59 233.0 273 46.9
Lsat_1_v5_gn_2_41360 Lactuca sativa HOM05D006857 ORTHO05D008679 7.8e-59 231.5 271 47.2
Solyc09g090690.4 Solanum lycopersicum HOM05D006857 ORTHO05D008679 7.8e-59 231.5 276 47.1
Sopen09g033630 Solanum pennellii HOM05D006857 ORTHO05D008679 1.0e-58 231.1 276 47.1
ECA234G1558 Erigeron canadensis HOM05D006857 ORTHO05D005985 3.0e-58 229.6 269 45.4
Sp7g10880 Schrenkiella parvula HOM05D006857 ORTHO05D008679 8.6e-58 228.0 271 46.1
THA.LOC104804575 Tarenaya hassleriana HOM05D006857 ORTHO05D008679 8.6e-58 228.0 272 47.4
CARHR218870 Cardamine hirsuta HOM05D006857 ORTHO05D008679 1.1e-57 227.6 269 46.8
A05p16520 Brassica napus HOM05D006857 ORTHO05D008679 1.2e-56 224.2 271 45.0
BraA05t20557Z Brassica rapa HOM05D006857 ORTHO05D008679 1.6e-56 223.8 271 45.4
Zm00001eb077400 Zea mays HOM05D006857 ORTHO05D008679 6.2e-56 221.9 271 45.0
Carub.0007s2931 Capsella rubella HOM05D006857 ORTHO05D008679 5.2e-55 218.8 268 45.5
C06p17330 Brassica napus HOM05D006857 ORTHO05D008679 6.9e-55 218.4 271 45.0
BolC6t36929H Brassica oleracea HOM05D006857 ORTHO05D008679 6.9e-55 218.4 271 45.0
Os04g0510700 Oryza sativa ssp. japonica HOM05D006857 ORTHO05D008679 2.0e-54 216.9 276 44.6
Thhalv10026810m.g Eutrema salsugineum HOM05D006857 ORTHO05D008679 1.3e-53 214.2 271 43.9
AL9U10380 Arabidopsis lyrata HOM05D006857 ORTHO05D008679 2.2e-53 213.4 268 45.1
AT4G13330 Arabidopsis thaliana HOM05D006857 ORTHO05D008679 7.1e-52 208.4 268 44.0
CDE02G1483 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 2.6e-46 189.9 248 41.9
MBI10_g35433_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 5.8e-46 188.7 242 45.9
unitig_748.g8298 Utricularia gibba HOM05D006857 ORTHO05D008679 7.6e-38 161.8 220 39.1
Mapoly0127s0023 Marchantia polymorpha HOM05D006857 ORTHO05D008679 7.1e-36 155.2 291 39.2
AagrBONN_evm.TU.Sc2ySwM_117.1189 Anthoceros agrestis HOM05D006857 ORTHO05D008679 1.3e-34 151.0 256 39.5
Pp3c15_24290 Physcomitrium patens HOM05D006857 ORTHO05D008679 3.0e-34 149.8 261 37.9
BcaC08g44310 Brassica carinata HOM05D006857 ORTHO05D008679 1.1e-33 147.9 222 39.2
CDE08G1596 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 1.3e-26 124.4 189 38.1
FvH4_5g26950 Fragaria vesca HOM05D006857 ORTHO05D008679 3.8e-21 106.3 78 61.5
FAN13G3085 Fragaria x ananassa HOM05D006857 ORTHO05D008679 4.6e-19 99.4 78 59.0
SEGI_21065 Sequoiadendron giganteum HOM05D006857 ORTHO05D008679 1.7e-16 90.9 104 49.0
TPR.G25294 Trifolium pratense HOM05D006857 ORTHO05D008679 2.6e-14 83.6 113 39.8
BcaC08g44309 Brassica carinata HOM05D006857 ORTHO05D008679 1.7e-08 64.3 39 74.4
MCO07G483 Micromonas commoda HOM05D006857 ORTHO05D008679 1.4e-07 61.2 175 32.0
MCO09G143 Micromonas commoda HOM05D006857 ORTHO05D008679 1.4e-07 61.2 172 29.7
MD13G1221100 Malus domestica HOM05D006857 ORTHO05D008679 3.4e-06 56.6 47 57.4


User provided reference genes

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