Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI00325 Sapria himalayana HOM05D006941 ORTHO05D008361 4.2e-33 144.1 70 100.0
Hund22020 Selenicereus undatus HOM05D006941 ORTHO05D008361 7.9e-24 113.2 68 72.1
arahy.Tifrunner.gnm1.ann1.UB09PE Arachis hypogaea HOM05D006941 ORTHO05D008361 3.9e-23 110.9 69 72.5
Manes.03G190000 Manihot esculenta HOM05D006941 ORTHO05D008361 4.4e-22 107.5 72 72.2
Potri.005G071700 Populus trichocarpa HOM05D006941 ORTHO05D008361 1.3e-21 105.9 72 72.2
Lj4g0022805 Lotus japonicus HOM05D006941 ORTHO05D008361 2.8e-21 104.8 70 68.6
EL10As5g23584 Beta vulgaris HOM05D006941 ORTHO05D008361 3.7e-21 104.4 70 68.6
FAN22G2172 Fragaria x ananassa HOM05D006941 ORTHO05D008361 3.7e-21 104.4 72 70.8
TWI09G0325 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 3.7e-21 104.4 72 70.8
Eucgr.H03682 Eucalyptus grandis HOM05D006941 ORTHO05D008361 4.8e-21 104.0 72 72.2
Prupe.1G143700 Prunus persica HOM05D006941 ORTHO05D008361 4.8e-21 104.0 72 69.4
FvH4_4g16990 Fragaria vesca HOM05D006941 ORTHO05D008361 6.3e-21 103.6 72 70.8
FAN07G2315 Fragaria x ananassa HOM05D006941 ORTHO05D008361 6.3e-21 103.6 72 70.8
FAN12G1403 Fragaria x ananassa HOM05D006941 ORTHO05D008361 6.3e-21 103.6 72 70.8
FAN12G3786 Fragaria x ananassa HOM05D006941 ORTHO05D008361 6.3e-21 103.6 72 70.8
Manes.14G117300 Manihot esculenta HOM05D006941 ORTHO05D008361 6.3e-21 103.6 72 70.8
CANSAT78G0092 Cannabis sativa HOM05D006941 ORTHO05D008361 8.2e-21 103.2 72 72.2
Phvul.007G158300 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 8.2e-21 103.2 72 69.4
Lj5g0014316 Lotus japonicus HOM05D006941 ORTHO05D008361 1.1e-20 102.8 72 68.1
Ca_09608_v3 Cicer arietinum L. HOM05D006941 ORTHO05D008361 1.4e-20 102.4 72 66.7
Eucgr.H03704 Eucalyptus grandis HOM05D006941 ORTHO05D008361 1.4e-20 102.4 72 70.8
FAN17G2868 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.4e-20 102.4 72 69.4
Gorai.005G056700 Gossypium raimondii HOM05D006941 ORTHO05D008361 1.4e-20 102.4 72 66.7
RcHm_v2.0_Chr4g0420661 Rosa chinensis HOM05D006941 ORTHO05D008361 1.4e-20 102.4 72 69.4
vmacro15274 Vaccinium macrocarpon HOM05D006941 ORTHO05D008361 1.4e-20 102.4 75 66.7
Glyma.13G132200 Glycine max HOM05D006941 ORTHO05D008361 2.4e-20 101.7 72 68.1
Duzib151G0434 Durio zibethinus HOM05D006941 ORTHO05D008361 3.1e-20 101.3 70 68.6
arahy.Tifrunner.gnm1.ann1.DDI179 Arachis hypogaea HOM05D006941 ORTHO05D008361 4.1e-20 100.9 85 60.0
Carub.0005s2918 Capsella rubella HOM05D006941 ORTHO05D008361 4.1e-20 100.9 68 69.1
Glyma.10G044600 Glycine max HOM05D006941 ORTHO05D008361 4.1e-20 100.9 72 66.7
Gohir.A02G045400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 4.1e-20 100.9 72 65.3
Gohir.D02G051400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 4.1e-20 100.9 72 65.3
Oeu010965.1 Olea europaea HOM05D006941 ORTHO05D008361 4.1e-20 100.9 72 68.1
Sabra07G0080600 Salix brachista HOM05D006941 ORTHO05D008361 4.1e-20 100.9 82 62.2
Thecc.04G275300 Theobroma cacao HOM05D006941 ORTHO05D008361 4.1e-20 100.9 72 65.3
Atru.chr4.2738 Acer truncatum HOM05D006941 ORTHO05D008361 5.3e-20 100.5 72 69.4
TWI53G0190 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 6.9e-20 100.1 71 69.0
DCAR_030574 Daucus carota HOM05D006941 ORTHO05D008361 1.2e-19 99.4 72 68.1
Lalb_Chr22g0358511 Lupinus albus HOM05D006941 ORTHO05D008361 1.2e-19 99.4 72 66.7
Phvul.010G109000 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 1.2e-19 99.4 72 65.3
Phvul.L002281 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 1.2e-19 99.4 72 65.3
Psat6g067840 Pisum sativum HOM05D006941 ORTHO05D008361 1.5e-19 99.0 64 70.3
PGR004G2827 Punica granatum HOM05D006941 ORTHO05D008361 1.5e-19 99.0 72 69.4
THA.LOC104820449 Tarenaya hassleriana HOM05D006941 ORTHO05D008361 1.5e-19 99.0 71 69.0
Lalb_Chr14g0364951 Lupinus albus HOM05D006941 ORTHO05D008361 3.4e-19 97.8 72 66.7
Nitab4.5_0001624g0050 Nicotiana tabacum HOM05D006941 ORTHO05D008361 3.4e-19 97.8 72 65.3
QL06p006942 Quercus lobata HOM05D006941 ORTHO05D008361 3.4e-19 97.8 71 64.8
Solyc01g067820.3 Solanum lycopersicum HOM05D006941 ORTHO05D008361 3.4e-19 97.8 72 65.3
PGSC0003DMG400022846 Solanum tuberosum HOM05D006941 ORTHO05D008361 3.4e-19 97.8 72 65.3
AT3G62450 Arabidopsis thaliana HOM05D006941 ORTHO05D008361 5.9e-19 97.1 68 67.6
BcaC07g42761 Brassica carinata HOM05D006941 ORTHO05D008361 5.9e-19 97.1 68 69.1
C08p37290 Brassica napus HOM05D006941 ORTHO05D008361 5.9e-19 97.1 68 69.1
BolC8t51307H Brassica oleracea HOM05D006941 ORTHO05D008361 5.9e-19 97.1 68 69.1
Oeu029280.1 Olea europaea HOM05D006941 ORTHO05D008361 5.9e-19 97.1 72 66.7
Peaxi162Scf01067g00024 Petunia axillaris HOM05D006941 ORTHO05D008361 7.7e-19 96.7 69 66.7
AL5G45260 Arabidopsis lyrata HOM05D006941 ORTHO05D008361 1.0e-18 96.3 68 67.6
CARHR172790 Cardamine hirsuta HOM05D006941 ORTHO05D008361 1.0e-18 96.3 70 61.4
CiPaw.02G087700 Carya illinoinensis HOM05D006941 ORTHO05D008361 1.0e-18 96.3 72 65.3
Sopen01g029770 Solanum pennellii HOM05D006941 ORTHO05D008361 1.0e-18 96.3 72 63.9
Sp5g00970 Schrenkiella parvula HOM05D006941 ORTHO05D008361 1.3e-18 95.9 69 65.2
CSS0029112 Camellia sinensis var. sinensis HOM05D006941 ORTHO05D008361 2.2e-18 95.1 72 62.5
Thhalv10006352m.g Eutrema salsugineum HOM05D006941 ORTHO05D008361 2.2e-18 95.1 69 65.2
Rhsim02G0014500 Rhododendron simsii HOM05D006941 ORTHO05D008361 2.2e-18 95.1 72 66.7
unitig_22.g6332 Utricularia gibba HOM05D006941 ORTHO05D008361 3.8e-18 94.4 67 65.7
A09p54410 Brassica napus HOM05D006941 ORTHO05D008361 5.0e-18 94.0 68 67.6
BraA09t40854Z Brassica rapa HOM05D006941 ORTHO05D008361 5.0e-18 94.0 68 67.6
CAN.G1327.4 Capsicum annuum HOM05D006941 ORTHO05D008361 5.0e-18 94.0 72 62.5
Medtr1g068580 Medicago truncatula HOM05D006941 ORTHO05D008361 5.0e-18 94.0 63 69.8
Migut.G00223 Erythranthe guttata HOM05D006941 ORTHO05D008361 8.5e-18 93.2 71 62.0
Os11g0107450 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 1.1e-17 92.8 64 70.3
ECA233G1626 Erigeron canadensis HOM05D006941 ORTHO05D008361 1.4e-17 92.4 72 63.9
Medtr2g005070 Medicago truncatula HOM05D006941 ORTHO05D008361 1.4e-17 92.4 62 71.0
SalBow1G8344 Salvia bowleyana HOM05D006941 ORTHO05D008361 1.4e-17 92.4 72 62.5
Sed0004518 Sechium edule HOM05D006941 ORTHO05D008361 1.9e-17 92.0 73 68.5
Actinidia32379 Actinidia chinensis HOM05D006941 ORTHO05D008361 2.5e-17 91.7 70 61.4
Os12g0106550 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 7.2e-17 90.1 67 68.7
Aa31LG10G16360 Aethionema arabicum HOM05D006941 ORTHO05D008361 9.4e-17 89.7 64 65.6
HanXRQChr05g0154771 Helianthus annuus HOM05D006941 ORTHO05D008361 1.2e-16 89.4 64 65.6
PSO302G0016 Papaver somniferum HOM05D006941 ORTHO05D008361 2.1e-16 88.6 62 67.7
BcaB02g07336 Brassica carinata HOM05D006941 ORTHO05D008361 1.4e-15 85.9 59 69.5
SGA_v2.0_scaffold57G20266 Striga asiatica HOM05D006941 ORTHO05D008361 2.3e-15 85.1 93 49.5
ClCG06G005480 Citrullus lanatus HOM05D006941 ORTHO05D008361 3.0e-15 84.7 78 55.1
Zm00001eb163280 Zea mays HOM05D006941 ORTHO05D008361 3.9e-15 84.3 64 65.6
Haze_01039 Corylus avellana HOM05D006941 ORTHO05D008361 5.2e-15 84.0 70 60.0
Zm00001eb094170 Zea mays HOM05D006941 ORTHO05D008361 8.8e-15 83.2 70 61.4
Cfa015511 Carpinus fangiana HOM05D006941 ORTHO05D008361 2.0e-14 82.0 68 60.3
VMungo0464G0431 Vigna mungo HOM05D006941 ORTHO05D008361 5.7e-14 80.5 131 37.4
SEGI_10041 Sequoiadendron giganteum HOM05D006941 ORTHO05D008361 2.2e-13 78.6 61 62.3
CDE02G1545 Ceratophyllum demersum HOM05D006941 ORTHO05D008361 3.7e-13 77.8 61 65.6
BcaC07g40728 Brassica carinata HOM05D006941 ORTHO05D008361 2.0e-11 72.0 66 59.1
HanXRQChr15g0466771 Helianthus annuus HOM05D006941 ORTHO05D008361 5.9e-11 70.5 129 34.9
PGSC0003DMG400029912 Solanum tuberosum HOM05D006941 ORTHO05D008361 7.7e-11 70.1 51 66.7
MD16G1176900 Malus domestica HOM05D006941 ORTHO05D008361 3.8e-10 67.8 52 65.4
Sabra05G0058700 Salix brachista HOM05D006941 ORTHO05D008361 5.0e-10 67.4 166 30.1
RcHm_v2.0_Chr1g0363231 Rosa chinensis HOM05D006941 ORTHO05D008361 1.1e-09 66.2 50 66.0
Eucgr.H03709 Eucalyptus grandis HOM05D006941 ORTHO05D008361 1.5e-09 65.9 41 73.2
Sc19g0004830 Simmondsia chinensis HOM05D006941 ORTHO05D008361 4.2e-09 64.3 41 70.7
Lsat_1_v5_gn_2_28060 Lactuca sativa HOM05D006941 ORTHO05D008361 9.4e-09 63.2 60 48.3
VMungo0720G2266 Vigna mungo HOM05D006941 ORTHO05D008361 1.6e-08 62.4 41 65.9
Ciclev10006724m.g Citrus clementina HOM05D006941 ORTHO05D008361 2.1e-08 62.0 41 65.9
vmacro16859 Vaccinium macrocarpon HOM05D000537 ORTHO05D000415 2.7e-08 61.6 38 73.7
Oeu048197.1 Olea europaea HOM05D010625 ORTHO05D008361 4.7e-08 60.8 42 64.3
COL.COLO4_13955 Corchorus olitorius HOM05D006941 ORTHO05D008361 6.1e-08 60.5 43 60.5
MSTRG.24772 Avicennia marina HOM05D006941 ORTHO05D008361 1.0e-07 59.7 41 68.3
Atru.chr2.2418 Acer truncatum HOM05D006941 ORTHO05D008361 1.4e-07 59.3 41 68.3
Eucgr.H03675 Eucalyptus grandis HOM05D006941 ORTHO05D008361 4.0e-07 57.8 40 62.5
SGA_v2.0_scaffold114G31931 Striga asiatica HOM05D006941 ORTHO05D008361 5.2e-07 57.4 34 70.6
Eucgr.H03674 Eucalyptus grandis HOM05D025724 ORTHO05D008361 6.7e-07 57.0 43 62.8
Medtr2g048470 Medicago truncatula HOM05D006941 ORTHO05D008361 6.7e-07 57.0 33 72.7


User provided reference genes

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