Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI00297 Sapria himalayana HOM05D003864 ORTHO05D004658 0.0e+00 1243.8 609 100.0
Sabra08G0157300 Salix brachista HOM05D003864 ORTHO05D004658 5.8e-70 269.6 547 35.1
Ciclev10005325m.g Citrus clementina HOM05D003864 ORTHO05D004658 3.7e-69 266.9 498 35.3
Potri.008G204700 Populus trichocarpa HOM05D003864 ORTHO05D004658 4.9e-69 266.5 547 34.7
CiPaw.01G152900 Carya illinoinensis HOM05D003864 ORTHO05D004658 1.4e-68 265.0 499 36.1
CiPaw.02G086600 Carya illinoinensis HOM05D003864 ORTHO05D004658 2.0e-67 261.2 499 35.5
Haze_01063 Corylus avellana HOM05D003864 ORTHO05D004658 2.3e-66 257.7 560 33.2
Cfa015492 Carpinus fangiana HOM05D003864 ORTHO05D004658 5.0e-66 256.5 553 33.5
Manes.03G191300 Manihot esculenta HOM05D003864 ORTHO05D004658 5.0e-66 256.5 499 35.5
Nn4g25986 Nelumbo nucifera HOM05D003864 ORTHO05D004658 6.6e-66 256.1 485 34.6
Manes.15G016900 Manihot esculenta HOM05D003864 ORTHO05D004658 2.5e-65 254.2 500 35.6
PGR031G0559 Punica granatum HOM05D003864 ORTHO05D004658 4.3e-65 253.4 533 32.8
Nn3g21324 Nelumbo nucifera HOM05D003864 ORTHO05D004658 7.3e-65 252.7 490 34.1
vmacro08202 Vaccinium macrocarpon HOM05D003864 ORTHO05D004658 1.6e-64 251.5 484 34.7
Actinidia23428 Actinidia chinensis HOM05D003864 ORTHO05D004658 1.4e-63 248.4 531 32.6
Aqoxy2G03115 Aquilegia oxysepala HOM05D003864 ORTHO05D004658 6.8e-63 246.1 484 33.7
Cc03_g02350 Coffea canephora HOM05D003864 ORTHO05D004658 6.8e-63 246.1 499 33.7
LjContig00389g0005087 Lotus japonicus HOM05D003864 ORTHO05D004658 5.8e-62 243.0 485 34.2
TWI53G0015 Tripterygium wilfordii HOM05D003864 ORTHO05D004658 9.9e-62 242.3 499 33.1
TWI53G1008 Tripterygium wilfordii HOM05D003864 ORTHO05D004658 9.9e-62 242.3 499 33.1
GSVIVG01017804001 Vitis vinifera HOM05D003864 ORTHO05D004658 1.3e-61 241.9 497 34.0
TAR633G1069 Trochodendron aralioides HOM05D003864 ORTHO05D004658 2.2e-61 241.1 499 33.5
MELO3C021355.2 Cucumis melo HOM05D003864 ORTHO05D004658 1.1e-60 238.8 502 32.9
Peaxi162Scf00033g01410 Petunia axillaris HOM05D003864 ORTHO05D004658 1.4e-60 238.4 504 32.5
PGSC0003DMG400030786 Solanum tuberosum HOM05D003864 ORTHO05D004658 1.9e-60 238.0 491 32.6
THA.LOC104820237 Tarenaya hassleriana HOM05D003864 ORTHO05D004658 1.9e-60 238.0 490 33.7
ClCG06G005360 Citrullus lanatus HOM05D003864 ORTHO05D004658 4.1e-60 236.9 502 32.5
Nitab4.5_0004537g0010 Nicotiana tabacum HOM05D003864 ORTHO05D004658 5.4e-60 236.5 485 34.2
A03p21870 Brassica napus HOM05D003864 ORTHO05D004658 7.1e-60 236.1 490 34.1
Gorai.011G185900 Gossypium raimondii HOM05D003864 ORTHO05D004658 7.1e-60 236.1 540 32.2
Gohir.D10G166700 Gossypium hirsutum HOM05D003864 ORTHO05D004658 9.2e-60 235.7 540 32.2
Lalb_Chr20g0118111 Lupinus albus HOM05D003864 ORTHO05D004658 9.2e-60 235.7 487 33.5
Ca_00573_v3 Cicer arietinum L. HOM05D003864 ORTHO05D004658 1.2e-59 235.3 484 33.3
CsaV3_6G017400 Cucumis sativus L. HOM05D003864 ORTHO05D004658 1.2e-59 235.3 502 32.5
Eucgr.B01266 Eucalyptus grandis HOM05D003864 ORTHO05D004658 1.6e-59 235.0 501 32.3
Phvul.006G161500 Phaseolus vulgaris HOM05D003864 ORTHO05D004658 1.6e-59 235.0 484 33.5
TAR362G0395 Trochodendron aralioides HOM05D003864 ORTHO05D004658 2.7e-59 234.2 499 33.1
Atru.chr4.2755 Acer truncatum HOM05D003864 ORTHO05D004658 3.5e-59 233.8 542 31.4
Lj6A670T81 Lonicera japonica HOM05D003864 ORTHO05D004658 3.5e-59 233.8 536 31.2
BraA03t11423Z Brassica rapa HOM05D003864 ORTHO05D004658 7.8e-59 232.6 491 34.2
Duzib151G0071 Durio zibethinus HOM05D003864 ORTHO05D004658 7.8e-59 232.6 491 32.8
Phvul.002G188400 Phaseolus vulgaris HOM05D003864 ORTHO05D004658 7.8e-59 232.6 540 32.8
Gohir.A10G101440 Gossypium hirsutum HOM05D003864 ORTHO05D004658 1.0e-58 232.3 514 32.1
Solyc01g067630.3 Solanum lycopersicum HOM05D003864 ORTHO05D004658 1.7e-58 231.5 485 33.0
CDE01G0506 Ceratophyllum demersum HOM05D003864 ORTHO05D004658 2.3e-58 231.1 548 31.0
Thecc.04G277700 Theobroma cacao HOM05D003864 ORTHO05D004658 3.0e-58 230.7 550 31.3
arahy.Tifrunner.gnm1.ann1.CLS5KG Arachis hypogaea HOM05D003864 ORTHO05D004658 6.6e-58 229.6 482 33.4
AL4G36380 Arabidopsis lyrata HOM05D003864 ORTHO05D004658 8.6e-58 229.2 490 33.1
MSTRG.10054 Avicennia marina HOM05D003864 ORTHO05D004658 1.1e-57 228.8 483 33.3
PGR004G1016 Punica granatum HOM05D003864 ORTHO05D004658 1.1e-57 228.8 558 29.9
Sed0008062 Sechium edule HOM05D003864 ORTHO05D004658 1.1e-57 228.8 497 32.8
Nitab4.5_0000784g0010 Nicotiana tabacum HOM05D003864 ORTHO05D004658 1.9e-57 228.0 485 32.6
CAN.G256.9 Capsicum annuum HOM05D003864 ORTHO05D004658 2.5e-57 227.6 485 33.0
Glyma.15G097900 Glycine max HOM05D003864 ORTHO05D004658 2.5e-57 227.6 529 32.5
Oeu044793.1 Olea europaea HOM05D003864 ORTHO05D004658 2.5e-57 227.6 485 33.0
THA.LOC104821766 Tarenaya hassleriana HOM05D003864 ORTHO05D004658 3.3e-57 227.3 504 31.9
Glyma.05G133900 Glycine max HOM05D003864 ORTHO05D004658 5.6e-57 226.5 499 32.9
Nitab4.5_0001054g0010 Nicotiana tabacum HOM05D003864 ORTHO05D004658 5.6e-57 226.5 562 31.5
ECA240G1720 Erigeron canadensis HOM05D003864 ORTHO05D004658 7.3e-57 226.1 499 31.1
C03p25940 Brassica napus HOM05D003864 ORTHO05D004658 1.6e-56 224.9 490 32.4
BraA05t19685Z Brassica rapa HOM05D003864 ORTHO05D004658 1.6e-56 224.9 490 32.7
Prupe.1G142000 Prunus persica HOM05D003864 ORTHO05D004658 1.6e-56 224.9 497 32.2
Glyma.13G215300 Glycine max HOM05D003864 ORTHO05D004658 2.1e-56 224.6 486 33.1
Os01g0367100 Oryza sativa ssp. japonica HOM05D003864 ORTHO05D004658 2.1e-56 224.6 503 31.4
Nitab4.5_0001459g0140 Nicotiana tabacum HOM05D003864 ORTHO05D004658 2.8e-56 224.2 501 32.1
Sc19g0004950 Simmondsia chinensis HOM05D003864 ORTHO05D004658 3.6e-56 223.8 551 31.0
Lj4g0016445 Lotus japonicus HOM05D003864 ORTHO05D004658 6.2e-56 223.0 547 31.1
PSO210G7573 Papaver somniferum HOM05D003864 ORTHO05D004658 6.2e-56 223.0 485 32.2
Zm00001eb131760 Zea mays HOM05D003864 ORTHO05D004658 6.2e-56 223.0 485 31.8
Thhalv10016876m.g Eutrema salsugineum HOM05D003864 ORTHO05D004658 1.1e-55 222.2 485 32.8
Glyma.08G088600 Glycine max HOM05D003864 ORTHO05D004658 1.4e-55 221.9 499 32.9
FvH4_4g17200 Fragaria vesca HOM05D003864 ORTHO05D004658 1.8e-55 221.5 497 32.2
TPR.G1486 Trifolium pratense HOM05D003864 ORTHO05D004658 1.8e-55 221.5 482 32.0
Sed0015457 Sechium edule HOM05D003864 ORTHO05D004658 2.4e-55 221.1 501 31.7
TPR.G23836 Trifolium pratense HOM05D003864 ORTHO05D004658 2.4e-55 221.1 547 31.6
Sp4g21430 Schrenkiella parvula HOM05D003864 ORTHO05D004658 1.5e-54 218.4 485 32.8
RcHm_v2.0_Chr4g0421021 Rosa chinensis HOM05D003864 ORTHO05D004658 3.4e-54 217.2 497 31.8
Lsat_1_v5_gn_5_56881 Lactuca sativa HOM05D003864 ORTHO05D004658 4.4e-54 216.9 485 31.5
Lalb_Chr07g0188241 Lupinus albus HOM05D003864 ORTHO05D004658 4.4e-54 216.9 484 32.4
PSO170G3769 Papaver somniferum HOM05D003864 ORTHO05D004658 4.4e-54 216.9 485 31.5
AT2G39080 Arabidopsis thaliana HOM05D003864 ORTHO05D004658 9.9e-54 215.7 490 32.0
Ca_18234_v3 Cicer arietinum L. HOM05D003864 ORTHO05D004658 9.9e-54 215.7 491 31.8
Carub.0004s2113 Capsella rubella HOM05D003864 ORTHO05D004658 1.7e-53 214.9 490 31.6
EL10Ac6g14524 Beta vulgaris HOM05D003864 ORTHO05D004658 2.9e-53 214.2 483 31.1
Dinv38324 Davidia involucrata HOM05D003864 ORTHO05D004658 1.1e-52 212.2 471 32.7
BcaB01g03648 Brassica carinata HOM05D003864 ORTHO05D004658 3.2e-52 210.7 484 32.2
arahy.Tifrunner.gnm1.ann1.ZU35GG Arachis hypogaea HOM05D003864 ORTHO05D004658 1.2e-51 208.8 494 32.2
Ah.12g064180 Amaranthus hybridus HOM05D003864 ORTHO05D004658 2.1e-51 208.0 534 29.4
Rhsim04G0216400 Rhododendron simsii HOM05D003864 ORTHO05D004658 4.6e-51 206.8 490 32.4
Zm00001eb341670 Zea mays HOM05D003864 ORTHO05D004658 4.6e-51 206.8 486 30.2
Medtr4g094742 Medicago truncatula HOM05D003864 ORTHO05D004658 6.0e-51 206.5 538 30.5
Migut.G00209 Erythranthe guttata HOM05D003864 ORTHO05D004658 1.3e-50 205.3 487 31.0
Lalb_Chr18g0055711 Lupinus albus HOM05D003864 ORTHO05D004658 1.3e-50 205.3 482 32.0
DCAR_002443 Daucus carota HOM05D003864 ORTHO05D004658 3.9e-50 203.8 494 30.0
Cpa.g.sc1008.4 Carica papaya HOM05D003864 ORTHO05D004658 5.1e-50 203.4 496 31.2
DCAR_027110 Daucus carota HOM05D003864 ORTHO05D004658 3.3e-49 200.7 485 29.5
A05p07200 Brassica napus HOM05D003864 ORTHO05D004658 5.6e-49 199.9 490 30.2
Medtr2g020190 Medicago truncatula HOM05D003864 ORTHO05D004658 5.6e-49 199.9 482 30.7
BcaB02g09145 Brassica carinata HOM05D003864 ORTHO05D004658 4.7e-48 196.8 490 30.2
BolC4t22455H Brassica oleracea HOM05D005803 ORTHO05D008090 2.4e-47 194.5 490 29.8
Hund20596 Selenicereus undatus HOM05D003864 ORTHO05D004658 4.0e-47 193.7 499 29.5
BcaC02g12038 Brassica carinata HOM05D003864 ORTHO05D004658 2.6e-46 191.0 490 29.6
vmacro15256 Vaccinium macrocarpon HOM05D003864 ORTHO05D004658 4.4e-46 190.3 589 28.0
Peaxi162Scf00386g00316 Petunia axillaris HOM05D003864 ORTHO05D004658 9.9e-46 189.1 485 31.3
vmacro22597 Vaccinium macrocarpon HOM05D003864 ORTHO05D004658 2.9e-45 187.6 485 30.1
MD16G1174800 Malus domestica HOM05D003864 ORTHO05D004658 1.1e-44 185.7 497 30.2
HPP92_017180 Vanilla planifolia HOM05D003864 ORTHO05D004658 1.9e-44 184.9 507 28.2
MD13G1173800 Malus domestica HOM05D003864 ORTHO05D004658 3.2e-44 184.1 482 29.5
CDE05G0625 Ceratophyllum demersum HOM05D003864 ORTHO05D004658 5.4e-44 183.3 504 28.6
C04p08610 Brassica napus HOM05D003864 ORTHO05D004658 1.2e-43 182.2 495 29.1
ATR0706G015 Amborella trichopoda HOM05D003864 ORTHO05D004658 2.1e-43 181.4 568 28.5
Rhsim02G0013600 Rhododendron simsii HOM05D003864 ORTHO05D004658 1.3e-42 178.7 549 28.6
Psat1g187240 Pisum sativum HOM05D003864 ORTHO05D004658 1.7e-42 178.3 476 30.9
VMungo0540G0878 Vigna mungo HOM05D006883 ORTHO05D008624 4.3e-41 173.7 454 29.7
Hma1.2p1_0150F.1_g066600 Hydrangea macrophylla HOM05D003864 ORTHO05D004658 1.6e-40 171.8 453 29.8
COL.COLO4_13927 Corchorus olitorius HOM05D003864 ORTHO05D004658 1.4e-39 168.7 485 28.7
MBI19_g44903_MAGBIO Magnolia biondii HOM05D003864 ORTHO05D004658 1.4e-39 168.7 370 31.4
Actinidia00050 Actinidia chinensis HOM05D003864 ORTHO05D004658 9.0e-39 166.0 451 29.7
Pp3c13_19760 Physcomitrium patens HOM05D003864 ORTHO05D004658 9.0e-39 166.0 496 27.4
Mapoly0090s0075 Marchantia polymorpha HOM05D003864 ORTHO05D004658 3.4e-38 164.1 497 29.2
Pp3c12_8620 Physcomitrium patens HOM05D003864 ORTHO05D004658 7.6e-38 162.9 500 26.2
CARHR133840 Cardamine hirsuta HOM05D003864 ORTHO05D004658 1.1e-36 159.1 280 36.8
arahy.Tifrunner.gnm1.ann1.858I9V Arachis hypogaea HOM05D003864 ORTHO05D004658 7.9e-35 152.9 500 27.0
arahy.Tifrunner.gnm1.ann1.WPBE4U Arachis hypogaea HOM05D003864 ORTHO05D004658 3.9e-34 150.6 500 26.8
QL06p007391 Quercus lobata HOM05D003864 ORTHO05D004658 6.7e-34 149.8 301 34.9
Dinv44425 Davidia involucrata HOM05D003864 ORTHO05D004658 1.1e-33 149.1 264 36.0
AagrBONN_evm.TU.Sc2ySwM_344.1910 Anthoceros agrestis HOM05D003864 ORTHO05D004658 9.6e-33 146.0 488 27.0
unitig_748.g8370 Utricularia gibba HOM05D003864 ORTHO05D004658 4.8e-32 143.7 170 45.3
Sc25g0004750 Simmondsia chinensis HOM05D003864 ORTHO05D004658 1.1e-31 142.5 350 29.1
VMungo0251G3051 Vigna mungo HOM05D003864 ORTHO05D004658 1.8e-31 141.7 540 26.3
SGA_v2.0_scaffold57G20242 Striga asiatica HOM05D003864 ORTHO05D004658 9.9e-30 136.0 483 26.3
SalBow2G1899 Salvia bowleyana HOM05D003864 ORTHO05D004658 1.3e-29 135.6 259 34.0
BcaC02g12030 Brassica carinata HOM05D003864 ORTHO05D004658 2.2e-29 134.8 212 37.3
SGA_v2.0_scaffold89G27550 Striga asiatica HOM05D003864 ORTHO05D004658 6.4e-29 133.3 497 24.9
C04p08680 Brassica napus HOM05D003864 ORTHO05D004658 1.1e-28 132.5 178 41.6
CBR_g37156 Chara braunii HOM05D003864 ORTHO05D004658 1.9e-28 131.7 479 25.5
PGSC0003DMG400010656 Solanum tuberosum HOM05D003864 ORTHO05D004658 5.5e-28 130.2 245 34.7
BolC3t14979H Brassica oleracea HOM05D003864 ORTHO05D004658 9.3e-28 129.4 250 34.8
Solyc06g054530.3 Solanum lycopersicum HOM05D003864 ORTHO05D004658 1.6e-27 128.6 250 33.2
Psat7g088240 Pisum sativum HOM05D003864 ORTHO05D004658 3.5e-27 127.5 263 33.5
Sopen06g019600 Solanum pennellii HOM05D003864 ORTHO05D004658 3.5e-27 127.5 250 33.2
SMO356G0587 Selaginella moellendorffii HOM05D003864 ORTHO05D004658 4.6e-27 127.1 502 23.9
AUR62002937 Chenopodium quinoa HOM05D003864 ORTHO05D004658 1.0e-26 125.9 486 25.7
Sopen01g029580 Solanum pennellii HOM05D003864 ORTHO05D004658 1.3e-26 125.6 245 34.3
CSS0003637 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 6.7e-26 123.2 79 63.3
CSS0011053 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 6.7e-26 123.2 79 63.3
Aa31LG5G20520 Aethionema arabicum HOM05D003864 ORTHO05D004658 8.7e-26 122.9 500 23.8
CDE12G0314 Ceratophyllum demersum HOM05D003864 ORTHO05D004658 1.9e-25 121.7 164 41.5
FAN12G3853 Fragaria x ananassa HOM05D003864 ORTHO05D004658 2.5e-25 121.3 106 50.9
unitig_748.g8369 Utricularia gibba HOM05D000472 ORTHO05D000344 2.5e-25 121.3 267 32.6
MBI19_g26585_MAGBIO Magnolia biondii HOM05D003864 ORTHO05D004658 3.3e-25 120.9 79 62.0
CSS0038005 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 4.3e-25 120.6 280 32.9
CSS0001944 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 5.6e-25 120.2 280 32.9
CSS0041699 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 5.6e-25 120.2 217 35.9
HanXRQChr13g0411221 Helianthus annuus HOM05D003864 ORTHO05D004658 9.6e-25 119.4 165 40.0
HanXRQChr13g0411231 Helianthus annuus HOM05D003864 ORTHO05D004658 2.1e-24 118.2 137 41.6
FAN17G0790 Fragaria x ananassa HOM05D003864 ORTHO05D004658 2.8e-24 117.9 93 54.8
FAN07G1078 Fragaria x ananassa HOM05D003864 ORTHO05D004658 8.2e-24 116.3 93 53.8
CDE12G0924 Ceratophyllum demersum HOM05D003864 ORTHO05D004658 1.2e-22 112.5 85 56.5
BolC4t22460H Brassica oleracea HOM05D003864 ORTHO05D004658 2.6e-22 111.3 164 39.6
FAN22G0711 Fragaria x ananassa HOM05D003864 ORTHO05D004658 2.2e-21 108.2 102 49.0
Os01g0367400 Oryza sativa ssp. japonica HOM05D003864 ORTHO05D004658 1.1e-20 105.9 78 59.0
BcaNung07183 Brassica carinata HOM05D005803 ORTHO05D008090 1.4e-20 105.5 74 60.8
AUR62007746 Chenopodium quinoa HOM05D003864 ORTHO05D004658 7.1e-20 103.2 79 57.0
QL06p007393 Quercus lobata HOM05D003864 ORTHO05D004658 3.3e-17 94.4 161 37.9
Actinidia25721 Actinidia chinensis HOM05D003864 ORTHO05D004658 6.3e-16 90.1 60 60.0
SEGI_13555 Sequoiadendron giganteum HOM05D003864 ORTHO05D004658 6.5e-13 80.1 59 59.3
RcHm_v2.0_Chr4g0421071 Rosa chinensis HOM05D003864 ORTHO05D004658 1.1e-12 79.3 54 63.0
MCO15G076 Micromonas commoda HOM05D003864 ORTHO05D004658 1.9e-12 78.6 482 20.1
PRCOL_00006073 Prasinoderma coloniale HOM05D003864 ORTHO05D004658 9.3e-12 76.3 518 22.0
SEGI_31487 Sequoiadendron giganteum HOM05D003864 ORTHO05D004658 9.3e-12 76.3 103 37.9
SEGI_14152 Sequoiadendron giganteum HOM05D003864 ORTHO05D004658 3.6e-11 74.3 230 27.0
Cre13.g608000 Chlamydomonas reinhardtii HOM05D003864 ORTHO05D004658 7.9e-11 73.2 379 23.0
CSS0015623 Camellia sinensis var. sinensis HOM05D003864 ORTHO05D004658 5.1e-10 70.5 53 62.3
RcHm_v2.0_Chr4g0421081 Rosa chinensis HOM05D003864 ORTHO05D004658 2.2e-08 65.1 54 55.6
MSTRG.21813 Avicennia marina HOM05D003864 ORTHO05D004658 3.7e-08 64.3 207 29.5
Medtr8g027510 Medicago truncatula HOM05D003864 ORTHO05D004658 4.1e-07 60.8 50 62.0


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