Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI00180 Sapria himalayana HOM05D006322 ORTHO05D007716 7.5e-155 550.4 271 100.0
Manes.03G203000 Manihot esculenta HOM05D006322 ORTHO05D007716 1.9e-73 280.0 248 55.2
Potri.008G106600 Populus trichocarpa HOM05D006322 ORTHO05D007716 1.0e-71 274.2 250 54.0
Sabra08G0080400 Salix brachista HOM05D006322 ORTHO05D007716 2.3e-71 273.1 251 53.4
Thecc.04G298700 Theobroma cacao HOM05D006322 ORTHO05D007716 2.8e-69 266.2 245 52.7
COL.COLO4_34636 Corchorus olitorius HOM05D006322 ORTHO05D007716 1.2e-67 260.8 245 51.8
Cpa.g.sc9.74 Carica papaya HOM05D006322 ORTHO05D007716 1.6e-67 260.4 249 50.6
Oeu019970.1 Olea europaea HOM05D006322 ORTHO05D007716 3.5e-67 259.2 244 52.0
TAR636G2967 Trochodendron aralioides HOM05D006322 ORTHO05D007716 7.7e-67 258.1 253 51.0
Duzib052G0456 Durio zibethinus HOM05D006322 ORTHO05D007716 1.3e-66 257.3 249 51.4
Duzib151G0960 Durio zibethinus HOM05D006322 ORTHO05D007716 2.9e-66 256.1 244 52.0
CiPaw.01G139400 Carya illinoinensis HOM05D006322 ORTHO05D007716 3.8e-66 255.8 244 51.2
Glyma.17G032700 Glycine max HOM05D006322 ORTHO05D007716 3.8e-66 255.8 249 50.6
Nn3g21692 Nelumbo nucifera HOM05D006322 ORTHO05D007716 6.5e-66 255.0 252 50.4
CANSAT78G1173 Cannabis sativa HOM05D006322 ORTHO05D007716 1.5e-65 253.8 251 49.8
Ciclev10005751m.g Citrus clementina HOM05D006322 ORTHO05D007716 1.5e-65 253.8 257 49.0
TWI09G0431 Tripterygium wilfordii HOM05D006322 ORTHO05D007716 1.5e-65 253.8 247 50.2
Haze_01283 Corylus avellana HOM05D006322 ORTHO05D007716 1.9e-65 253.4 251 50.6
Actinidia40367 Actinidia chinensis HOM05D006322 ORTHO05D007716 3.2e-65 252.7 245 51.4
Prupe.1G119400 Prunus persica HOM05D006322 ORTHO05D007716 3.2e-65 252.7 260 48.5
Sc25g0003310 Simmondsia chinensis HOM05D006322 ORTHO05D007716 5.5e-65 251.9 248 48.8
MD16G1155500 Malus domestica HOM05D006322 ORTHO05D007716 7.2e-65 251.5 255 48.2
Migut.N00046 Erythranthe guttata HOM05D006322 ORTHO05D007716 1.2e-64 250.8 258 48.8
arahy.Tifrunner.gnm1.ann1.WPA2XH Arachis hypogaea HOM05D006322 ORTHO05D007716 1.6e-64 250.4 257 49.0
QL06p011774 Quercus lobata HOM05D006322 ORTHO05D007716 1.6e-64 250.4 249 49.8
Atru.chr4.3025 Acer truncatum HOM05D006322 ORTHO05D007716 2.7e-64 249.6 250 48.8
Lju470A16T21 Lonicera japonica HOM05D006322 ORTHO05D007716 2.7e-64 249.6 259 45.9
CSS0012053 Camellia sinensis var. sinensis HOM05D006322 ORTHO05D007716 4.7e-64 248.8 246 49.2
Cfa015332 Carpinus fangiana HOM05D006322 ORTHO05D007716 4.7e-64 248.8 249 49.8
Gohir.D09G235800 Gossypium hirsutum HOM05D006322 ORTHO05D007716 6.1e-64 248.4 243 49.4
Hund11963 Selenicereus undatus HOM05D006322 ORTHO05D007716 6.1e-64 248.4 243 49.8
arahy.Tifrunner.gnm1.ann1.57P81C Arachis hypogaea HOM05D006322 ORTHO05D007716 1.0e-63 247.7 257 48.6
PSO357G0527 Papaver somniferum HOM05D006322 ORTHO05D007716 2.3e-63 246.5 253 46.6
Gohir.A09G235000 Gossypium hirsutum HOM05D006322 ORTHO05D007716 3.0e-63 246.1 243 49.0
Solyc11g007570.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 3.0e-63 246.1 244 48.8
Gorai.006G258900 Gossypium raimondii HOM05D006322 ORTHO05D007716 5.2e-63 245.4 243 48.6
VMungo1215G3118 Vigna mungo HOM05D006322 ORTHO05D007716 6.8e-63 245.0 249 49.0
Phvul.003G113400 Phaseolus vulgaris HOM05D006322 ORTHO05D007716 8.8e-63 244.6 249 48.6
FAN07G2163 Fragaria x ananassa HOM05D006322 ORTHO05D007716 1.2e-62 244.2 245 48.6
Lsat_1_v5_gn_6_16821 Lactuca sativa HOM05D006322 ORTHO05D007716 1.5e-62 243.8 242 49.2
PGR031G3552 Punica granatum HOM05D006322 ORTHO05D007716 1.5e-62 243.8 254 48.4
Sopen11g003410 Solanum pennellii HOM05D006322 ORTHO05D007716 2.0e-62 243.4 244 48.8
PGSC0003DMG400027315 Solanum tuberosum HOM05D006322 ORTHO05D007716 2.0e-62 243.4 244 48.4
Ca_21447_v3 Cicer arietinum L. HOM05D006322 ORTHO05D007716 2.6e-62 243.0 249 47.4
Hma1.2p1_0078F.1_g040000 Hydrangea macrophylla HOM05D006322 ORTHO05D007716 4.4e-62 242.3 255 47.5
Eucgr.A00353 Eucalyptus grandis HOM05D006322 ORTHO05D007716 5.7e-62 241.9 248 48.0
Lj4g0019910 Lotus japonicus HOM05D006322 ORTHO05D007716 5.7e-62 241.9 249 48.6
Peaxi162Scf00244g00413 Petunia axillaris HOM05D006322 ORTHO05D007716 7.5e-62 241.5 244 48.8
HanXRQChr13g0395571 Helianthus annuus HOM05D006322 ORTHO05D007716 9.8e-62 241.1 242 48.3
vmacro08057 Vaccinium macrocarpon HOM05D006322 ORTHO05D007716 9.8e-62 241.1 245 49.0
Lalb_Chr13g0298441 Lupinus albus HOM05D006322 ORTHO05D007716 1.3e-61 240.7 244 49.6
Cc03_g00960 Coffea canephora HOM05D006322 ORTHO05D007716 2.8e-61 239.6 244 48.0
SalBow5G5236 Salvia bowleyana HOM05D006322 ORTHO05D007716 8.3e-61 238.0 253 48.2
ECA233G0552 Erigeron canadensis HOM05D006322 ORTHO05D007716 1.1e-60 237.7 242 47.5
SGA_v2.0_scaffold119G32659 Striga asiatica HOM05D006322 ORTHO05D007716 1.1e-60 237.7 263 45.6
MBI19_g07237_MAGBIO Magnolia biondii HOM05D006322 ORTHO05D007716 1.8e-60 236.9 254 46.9
Nitab4.5_0001807g0060 Nicotiana tabacum HOM05D006322 ORTHO05D007716 1.8e-60 236.9 244 47.5
AL3G29970 Arabidopsis lyrata HOM05D006322 ORTHO05D007716 3.1e-60 236.1 249 48.2
Nitab4.5_0002259g0050 Nicotiana tabacum HOM05D006322 ORTHO05D007716 4.1e-60 235.7 253 46.2
Psat4g024200 Pisum sativum HOM05D006322 ORTHO05D007716 4.1e-60 235.7 250 46.4
GSVIVG01035010001 Vitis vinifera HOM05D006322 ORTHO05D007716 5.4e-60 235.3 234 50.4
PSO170G6693 Papaver somniferum HOM05D006322 ORTHO05D007716 7.0e-60 235.0 253 46.2
MSTRG.24817 Avicennia marina HOM05D006322 ORTHO05D007716 1.2e-59 234.2 252 45.6
BraA03t13148Z Brassica rapa HOM05D006322 ORTHO05D007716 3.5e-59 232.6 248 48.0
RcHm_v2.0_Chr4g0424801 Rosa chinensis HOM05D006322 ORTHO05D007716 3.5e-59 232.6 250 45.2
Aa31LG8G4030 Aethionema arabicum HOM05D006322 ORTHO05D007716 5.9e-59 231.9 250 46.8
Psat4g024280 Pisum sativum HOM05D006322 ORTHO05D007716 5.9e-59 231.9 248 45.2
AT3G16990 Arabidopsis thaliana HOM05D006322 ORTHO05D007716 7.7e-59 231.5 249 47.0
ATR0796G257 Amborella trichopoda HOM05D006322 ORTHO05D007716 1.0e-58 231.1 246 46.3
EL10Ac3g05469 Beta vulgaris HOM05D006322 ORTHO05D007716 1.0e-58 231.1 243 49.0
Medtr4g121940 Medicago truncatula HOM05D006322 ORTHO05D007716 1.0e-58 231.1 249 45.4
A03p40000 Brassica napus HOM05D006322 ORTHO05D007716 1.3e-58 230.7 248 47.6
Aqoxy2G02768 Aquilegia oxysepala HOM05D006322 ORTHO05D007716 2.3e-58 229.9 254 45.3
BcaB04g18916 Brassica carinata HOM05D006322 ORTHO05D007716 2.3e-58 229.9 252 46.0
BcaC01g03797 Brassica carinata HOM05D006322 ORTHO05D007716 2.3e-58 229.9 252 46.0
BolC3t17131H Brassica oleracea HOM05D006322 ORTHO05D007716 2.3e-58 229.9 252 46.0
Thhalv10021446m.g Eutrema salsugineum HOM05D006322 ORTHO05D007716 2.3e-58 229.9 254 45.3
C03p48530 Brassica napus HOM05D006322 ORTHO05D007716 2.9e-58 229.6 252 46.0
Carub.0003s1674 Capsella rubella HOM05D006322 ORTHO05D007716 3.8e-58 229.2 249 46.6
Rhsim04G0234900 Rhododendron simsii HOM05D006322 ORTHO05D007716 8.6e-58 228.0 243 47.3
Sp3g15210 Schrenkiella parvula HOM05D006322 ORTHO05D007716 3.3e-57 226.1 244 46.7
CsaV3_6G022370 Cucumis sativus L. HOM05D006322 ORTHO05D007716 1.6e-56 223.8 241 47.7
Dinv44297 Davidia involucrata HOM05D006322 ORTHO05D007716 2.8e-56 223.0 218 51.4
CARHR092240 Cardamine hirsuta HOM05D006322 ORTHO05D007716 6.1e-56 221.9 248 45.2
Os03g0306900 Oryza sativa ssp. japonica HOM05D006322 ORTHO05D007716 9.8e-54 214.5 241 44.0
HPP92_001241 Vanilla planifolia HOM05D006322 ORTHO05D007716 9.8e-54 214.5 246 43.5
DCAR_027007 Daucus carota HOM05D006322 ORTHO05D007716 3.7e-53 212.6 302 37.7
MELO3C021273.2 Cucumis melo HOM05D006322 ORTHO05D007716 4.9e-53 212.2 241 46.5
SEGI_24166 Sequoiadendron giganteum HOM05D006322 ORTHO05D007716 1.1e-52 211.1 250 44.8
ClCG06G004620 Citrullus lanatus HOM05D006322 ORTHO05D007716 5.4e-52 208.8 241 45.2
FAN12G2263 Fragaria x ananassa HOM05D006322 ORTHO05D007716 7.0e-52 208.4 227 46.3
Sed0017771 Sechium edule HOM05D006322 ORTHO05D007716 1.6e-51 207.2 241 45.6
Zm00001eb396140 Zea mays HOM05D006322 ORTHO05D007716 1.1e-49 201.1 241 41.1
BcaB04g18918 Brassica carinata HOM05D006322 ORTHO05D007716 1.5e-49 200.7 252 42.5
FvH4_4g19550 Fragaria vesca HOM05D006322 ORTHO05D007716 1.5e-49 200.7 209 49.3
CAN.G135.71 Capsicum annuum HOM05D006322 ORTHO05D007716 1.2e-48 197.6 176 52.3
DCAR_030477 Daucus carota HOM05D006322 ORTHO05D007716 2.1e-48 196.8 253 42.3
AUR62016124 Chenopodium quinoa HOM05D006322 ORTHO05D007716 4.7e-48 195.7 174 55.2
AUR62041396 Chenopodium quinoa HOM05D006322 ORTHO05D007716 4.7e-48 195.7 173 55.5
THA.LOC104802603 Tarenaya hassleriana HOM05D006322 ORTHO05D007716 1.0e-47 194.5 177 53.1
Peaxi162Scf00244g00510 Petunia axillaris HOM05D006322 ORTHO05D007716 3.2e-44 183.0 244 38.5
Actinidia27045 Actinidia chinensis HOM05D006322 ORTHO05D007716 9.2e-44 181.4 146 58.9
CAN.G135.72 Capsicum annuum HOM05D006322 ORTHO05D007716 9.2e-44 181.4 245 40.4
Mapoly0003s0261 Marchantia polymorpha HOM05D006322 ORTHO05D007716 3.5e-43 179.5 241 37.3
Solyc11g007560.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 7.8e-43 178.3 245 38.4
SMO116G0484 Selaginella moellendorffii HOM05D006322 ORTHO05D007716 2.5e-41 173.3 247 38.5
TAR362G0340 Trochodendron aralioides HOM05D006322 ORTHO05D007716 1.1e-39 167.9 264 36.4
Ah.13g071980 Amaranthus hybridus HOM05D006322 ORTHO05D007716 5.2e-39 165.6 236 38.1
AagrBONN_evm.TU.Sc2ySwM_117.1930 Anthoceros agrestis HOM05D006322 ORTHO05D007716 1.7e-37 160.6 241 37.3
Nitab4.5_0001807g0070 Nicotiana tabacum HOM05D006322 ORTHO05D007716 4.9e-37 159.1 235 38.7
TPR.G20694 Trifolium pratense HOM05D006322 ORTHO05D007716 3.2e-36 156.4 152 49.3
Pp3c10_15580 Physcomitrium patens HOM05D006322 ORTHO05D007716 7.0e-36 155.2 249 33.7
EL10Ac7g16563 Beta vulgaris HOM05D006322 ORTHO05D007716 2.3e-34 150.2 156 49.4
Lalb_Chr20g0120881 Lupinus albus HOM05D006322 ORTHO05D007716 5.1e-34 149.1 140 48.6
BcaB04g18915 Brassica carinata HOM05D001503 ORTHO05D003820 6.6e-34 148.7 165 46.7
PGSC0003DMG400040588 Solanum tuberosum HOM05D006322 ORTHO05D007716 8.9e-31 138.3 163 41.7
Actinidia15599 Actinidia chinensis HOM05D006322 ORTHO05D007716 1.7e-26 124.0 116 51.7
CBR_g45493 Chara braunii HOM05D006322 ORTHO05D007716 9.2e-20 101.7 249 26.5
Atru.chr4.3023 Acer truncatum HOM05D006322 ORTHO05D007716 6.0e-19 99.0 80 56.2
Glyma.07G240701 Glycine max HOM05D006322 ORTHO05D007716 3.0e-18 96.7 94 53.2
EL10Ac9g22265 Beta vulgaris HOM05D006322 ORTHO05D007716 1.9e-17 94.0 93 50.5
Atru.chr4.2979 Acer truncatum HOM05D006322 ORTHO05D007716 2.8e-08 63.5 43 60.5
Lalb_Chr20g0120891 Lupinus albus HOM05D006322 ORTHO05D007716 9.0e-07 58.5 61 44.3


User provided reference genes

Program Settings