Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI00076 Sapria himalayana HOM05D001092 ORTHO05D000923 8.1e-34 146.4 67 100.0
ECA247G3249 Erigeron canadensis HOM05D001092 ORTHO05D000923 2.0e-08 62.0 45 57.8
ATR1145G023 Amborella trichopoda HOM05D001092 ORTHO05D000923 7.6e-08 60.1 45 57.8
ATR1145G101 Amborella trichopoda HOM05D001092 ORTHO05D000923 7.6e-08 60.1 45 57.8
SalBow8G3461 Salvia bowleyana HOM05D001092 ORTHO05D000923 7.6e-08 60.1 45 55.6
TWI73G1237 Tripterygium wilfordii HOM05D001092 ORTHO05D000923 7.6e-08 60.1 45 57.8
HanXRQChr01g0031031 Helianthus annuus HOM05D001092 ORTHO05D000923 1.0e-07 59.7 45 55.6
RcHm_v2.0_Chr4g0426501 Rosa chinensis HOM05D001092 ORTHO05D000923 1.3e-07 59.3 45 57.8
Prupe.1G110200 Prunus persica HOM05D001092 ORTHO05D000923 1.7e-07 58.9 45 55.6
SGA_v2.0_scaffold157G37366 Striga asiatica HOM05D001092 ORTHO05D000923 1.7e-07 58.9 44 59.1
HanXRQChr10g0319871 Helianthus annuus HOM05D001092 ORTHO05D000923 2.2e-07 58.5 44 56.8
Sed0011983 Sechium edule HOM05D001092 ORTHO05D000923 2.2e-07 58.5 45 53.3
Potri.008G100600 Populus trichocarpa HOM05D001092 ORTHO05D000923 2.9e-07 58.2 45 55.6
PGR004G1484 Punica granatum HOM05D001092 ORTHO05D000923 2.9e-07 58.2 45 55.6
MSTRG.3839 Avicennia marina HOM05D001092 ORTHO05D000923 3.8e-07 57.8 45 55.6
CSS0029198 Camellia sinensis var. sinensis HOM05D001092 ORTHO05D000923 3.8e-07 57.8 45 55.6
CiPaw.01G132700 Carya illinoinensis HOM05D001092 ORTHO05D000923 3.8e-07 57.8 45 55.6
Haze_00817 Corylus avellana HOM05D001092 ORTHO05D000923 3.8e-07 57.8 45 55.6
BcaB04g17465 Brassica carinata HOM05D001092 ORTHO05D000923 4.9e-07 57.4 43 58.1
BcaB07g33792 Brassica carinata HOM05D001092 ORTHO05D000923 4.9e-07 57.4 43 58.1
BcaC07g37171 Brassica carinata HOM05D001092 ORTHO05D000923 4.9e-07 57.4 43 58.1
A06p04720 Brassica napus HOM05D001092 ORTHO05D000923 4.9e-07 57.4 43 58.1
A08p05240 Brassica napus HOM05D001092 ORTHO05D000923 4.9e-07 57.4 43 58.1
C06p02470 Brassica napus HOM05D001092 ORTHO05D000923 4.9e-07 57.4 43 58.1
C08p05520 Brassica napus HOM05D001092 ORTHO05D000923 4.9e-07 57.4 43 58.1
BolC6t35374H Brassica oleracea HOM05D001092 ORTHO05D000923 4.9e-07 57.4 43 58.1
BolC8t47372H Brassica oleracea HOM05D001092 ORTHO05D000923 4.9e-07 57.4 43 58.1
BraA06t23675Z Brassica rapa HOM05D001092 ORTHO05D000923 4.9e-07 57.4 43 58.1
BraA08t32540Z Brassica rapa HOM05D001092 ORTHO05D000923 4.9e-07 57.4 43 58.1
Migut.G00017 Erythranthe guttata HOM05D001092 ORTHO05D000923 4.9e-07 57.4 45 53.3
MD16G1145300 Malus domestica HOM05D001092 ORTHO05D000923 4.9e-07 57.4 45 55.6
Aqoxy4G01582 Aquilegia oxysepala HOM05D001092 ORTHO05D000923 6.5e-07 57.0 45 53.3
Thhalv10011170m.g Eutrema salsugineum HOM05D001092 ORTHO05D000923 6.5e-07 57.0 43 58.1
FvH4_4g20980 Fragaria vesca HOM05D001092 ORTHO05D000923 6.5e-07 57.0 45 53.3
FAN12G2952 Fragaria x ananassa HOM05D001092 ORTHO05D000923 6.5e-07 57.0 45 53.3
Lj6A698G103 Lonicera japonica HOM05D001092 ORTHO05D000923 6.5e-07 57.0 44 59.1
Rhsim04G0245300 Rhododendron simsii HOM05D001092 ORTHO05D000923 6.5e-07 57.0 45 53.3
Sp1g35040 Schrenkiella parvula HOM05D001092 ORTHO05D000923 6.5e-07 57.0 43 58.1
THA.LOC104802610 Tarenaya hassleriana HOM05D001092 ORTHO05D000923 6.5e-07 57.0 44 56.8
Aa31LG10G5640 Aethionema arabicum HOM05D001092 ORTHO05D000923 8.4e-07 56.6 43 55.8
CDE02G0669 Ceratophyllum demersum HOM05D001092 ORTHO05D000923 8.4e-07 56.6 44 54.5
Manes.03G209800 Manihot esculenta HOM05D001092 ORTHO05D000923 8.4e-07 56.6 45 53.3
PSO210G3521 Papaver somniferum HOM05D001092 ORTHO05D000923 8.4e-07 56.6 45 55.6
PSO761G0196 Papaver somniferum HOM05D001092 ORTHO05D000923 8.4e-07 56.6 45 55.6
Cc03_g00400 Coffea canephora HOM05D001092 ORTHO05D000923 1.1e-06 56.2 45 53.3
Dinv29544 Davidia involucrata HOM05D001092 ORTHO05D000923 1.1e-06 56.2 45 53.3
AL1G54650 Arabidopsis lyrata HOM05D001092 ORTHO05D000923 1.4e-06 55.8 43 55.8
AT1G48090 Arabidopsis thaliana HOM05D001092 ORTHO05D000923 1.4e-06 55.8 43 55.8
Carub.0001s3719 Capsella rubella HOM05D001092 ORTHO05D000923 1.4e-06 55.8 43 55.8
CARHR037730 Cardamine hirsuta HOM05D001092 ORTHO05D000923 1.4e-06 55.8 43 55.8
Gohir.D10G182400 Gossypium hirsutum HOM05D001092 ORTHO05D000923 1.4e-06 55.8 44 54.5
Gorai.011G204400 Gossypium raimondii HOM05D001092 ORTHO05D000923 1.4e-06 55.8 44 54.5
Sabra08G0076100 Salix brachista HOM05D001092 ORTHO05D000923 1.4e-06 55.8 45 53.3
COL.COLO4_34531 Corchorus olitorius HOM05D001092 ORTHO05D000923 1.9e-06 55.5 44 54.5
FAN17G2279 Fragaria x ananassa HOM05D001092 ORTHO05D000923 1.9e-06 55.5 45 51.1
Gohir.A02G056802 Gossypium hirsutum HOM05D001092 ORTHO05D000923 1.9e-06 55.5 44 56.8
Gohir.A10G175901 Gossypium hirsutum HOM05D001092 ORTHO05D000923 1.9e-06 55.5 44 54.5
MD16G1145600 Malus domestica HOM05D001092 ORTHO05D000923 2.5e-06 55.1 45 53.3
HPP92_008101 Vanilla planifolia HOM05D001092 ORTHO05D000923 2.5e-06 55.1 44 50.0
Cpa.g.sc146.55 Carica papaya HOM05D001092 ORTHO05D000923 3.2e-06 54.7 44 54.5
Eucgr.H04089 Eucalyptus grandis HOM05D001092 ORTHO05D000923 3.2e-06 54.7 45 55.6
Gohir.D02G062000 Gossypium hirsutum HOM05D001092 ORTHO05D000923 3.2e-06 54.7 44 54.5
Gorai.005G069700 Gossypium raimondii HOM05D001092 ORTHO05D000923 3.2e-06 54.7 44 54.5
Nn2g14503 Nelumbo nucifera HOM05D001092 ORTHO05D000923 3.2e-06 54.7 45 51.1
Actinidia18491 Actinidia chinensis HOM05D001092 ORTHO05D000923 4.2e-06 54.3 45 51.1
Ciclev10004114m.g Citrus clementina HOM05D001092 ORTHO05D000923 4.2e-06 54.3 45 53.3
Pp3c9_20320 Physcomitrium patens HOM05D001092 ORTHO05D000923 4.2e-06 54.3 39 61.5
QL06p013529 Quercus lobata HOM05D001092 ORTHO05D000923 4.2e-06 54.3 45 51.1
TAR362G0616 Trochodendron aralioides HOM05D001092 ORTHO05D000923 4.2e-06 54.3 45 51.1
MBI07_g08155_MAGBIO Magnolia biondii HOM05D001092 ORTHO05D000923 5.5e-06 53.9 45 51.1
Nn2g14501 Nelumbo nucifera HOM05D001092 ORTHO05D000923 5.5e-06 53.9 45 51.1
GSVIVG01017643001 Vitis vinifera HOM05D001092 ORTHO05D000923 5.5e-06 53.9 45 53.3
Thecc.04G308400 Theobroma cacao HOM05D001092 ORTHO05D000923 7.1e-06 53.5 43 55.8
CsaV3_3G015400 Cucumis sativus L. HOM05D001092 ORTHO05D000923 9.3e-06 53.1 45 46.7
Lalb_Chr13g0298831 Lupinus albus HOM05D001092 ORTHO05D000923 9.3e-06 53.1 45 51.1


User provided reference genes

Program Settings