Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI00052 Sapria himalayana HOM05D000214 ORTHO05D000131 1.3e-28 129.0 63 100.0
TWI74G1528 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 1.3e-12 75.9 65 53.8
TWI79G1318 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 2.8e-12 74.7 63 52.4
SHI01777 Sapria himalayana HOM05D000214 ORTHO05D000131 2.4e-11 71.6 51 66.7
SHI24553 Sapria himalayana HOM05D000214 ORTHO05D000131 4.1e-11 70.9 53 66.0
Rhsim01G0115100 Rhododendron simsii HOM05D000214 ORTHO05D000131 9.1e-11 69.7 51 62.7
HanXRQChr14g0433871 Helianthus annuus HOM05D000214 ORTHO05D000131 1.2e-10 69.3 51 66.7
SHI10011 Sapria himalayana HOM05D000214 ORTHO05D000131 1.2e-10 69.3 54 63.0
SHI29762 Sapria himalayana HOM05D000214 ORTHO05D000131 1.2e-10 69.3 51 64.7
SHI01657 Sapria himalayana HOM05D000214 ORTHO05D000131 2.6e-10 68.2 51 64.7
SHI08424 Sapria himalayana HOM05D000214 ORTHO05D000131 2.6e-10 68.2 53 56.6
SHI07031 Sapria himalayana HOM05D000214 ORTHO05D000131 3.4e-10 67.8 51 66.7
Atru.chr3.3389 Acer truncatum HOM05D000214 ORTHO05D000131 4.5e-10 67.4 82 45.1
TWI31G0167 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 4.5e-10 67.4 51 60.8
TWI73G0797 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 4.5e-10 67.4 69 49.3
SHI16802 Sapria himalayana HOM05D000214 ORTHO05D000131 7.7e-10 66.6 51 62.7
SHI28862 Sapria himalayana HOM05D000214 ORTHO05D000131 7.7e-10 66.6 51 66.7
TWI09G0764 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 1.0e-09 66.2 82 45.1
SHI06400 Sapria himalayana HOM05D000214 ORTHO05D000131 1.3e-09 65.9 46 73.9
TWI18G1205 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 1.7e-09 65.5 51 60.8
AT2G13770 Arabidopsis thaliana HOM05D000214 ORTHO05D000131 2.9e-09 64.7 62 53.2
HanXRQChr17g0540061 Helianthus annuus HOM05D000214 ORTHO05D000131 2.9e-09 64.7 51 62.7
TWI12G0457 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 2.9e-09 64.7 63 50.8
TWI14G0790 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 2.9e-09 64.7 51 58.8
TWI79G0227 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 2.9e-09 64.7 51 58.8
CANSAT01G2145 Cannabis sativa HOM05D000214 ORTHO05D000131 3.8e-09 64.3 62 53.2
CANSAT35G1106 Cannabis sativa HOM05D000214 ORTHO05D000131 3.8e-09 64.3 62 53.2
CANSAT25G3898 Cannabis sativa HOM05D000214 ORTHO05D000131 5.0e-09 63.9 51 58.8
TWI36G1152 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 5.0e-09 63.9 51 54.9
TWI39G1198 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 6.5e-09 63.5 51 58.8
TWI53G0801 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 6.5e-09 63.5 51 52.9
TWI56G0084 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 6.5e-09 63.5 51 58.8
CARHR258710 Cardamine hirsuta HOM05D000214 ORTHO05D000131 8.5e-09 63.2 50 60.0
SHI04899 Sapria himalayana HOM05D000214 ORTHO05D000131 8.5e-09 63.2 51 62.7
TWI12G1376 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 8.5e-09 63.2 51 52.9
TWI34G1953 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 8.5e-09 63.2 63 49.2
Oeu024875.1 Olea europaea HOM05D000214 ORTHO05D000131 1.4e-08 62.4 63 49.2
QL02p046053 Quercus lobata HOM05D001576 ORTHO05D000131 3.2e-08 61.2 56 51.8
TWI09G0636 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 3.2e-08 61.2 51 56.9
TWI15G1159 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 3.2e-08 61.2 51 54.9
TWI75G0317 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 3.2e-08 61.2 51 54.9
Ciclev10024156m.g Citrus clementina HOM05D000214 ORTHO05D000131 4.2e-08 60.8 51 60.8
TWI15G0582 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 4.2e-08 60.8 51 54.9
TWI77G0695 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 4.2e-08 60.8 51 56.9
QL07p029514 Quercus lobata HOM05D000214 ORTHO05D000131 5.5e-08 60.5 54 51.9
SHI21837 Sapria himalayana HOM05D000214 ORTHO05D000131 5.5e-08 60.5 48 62.5
TWI53G1526 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 5.5e-08 60.5 51 51.0
PSO170G5440 Papaver somniferum HOM05D000214 ORTHO05D000131 7.2e-08 60.1 64 48.4
PSO210G3692 Papaver somniferum HOM05D000214 ORTHO05D000131 1.2e-07 59.3 51 54.9
TWI09G1638 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 1.2e-07 59.3 51 52.9
TWI32G0342 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 1.2e-07 59.3 63 47.6
CARHR111840 Cardamine hirsuta HOM05D000214 ORTHO05D000131 1.6e-07 58.9 52 53.8
TWI38G2274 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 1.6e-07 58.9 51 51.0
TWI79G1432 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 1.6e-07 58.9 51 49.0
Atru.chr10.1039 Acer truncatum HOM05D000214 ORTHO05D000131 2.1e-07 58.5 55 56.4
Ca_07345_v3 Cicer arietinum L. HOM05D000214 ORTHO05D000131 2.1e-07 58.5 51 58.8
SHI07361 Sapria himalayana HOM05D002388 ORTHO05D000131 2.1e-07 58.5 50 60.0
TWI32G1003 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 2.1e-07 58.5 51 52.9
TWI38G1241 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 2.1e-07 58.5 63 47.6
CARHR057560 Cardamine hirsuta HOM05D000214 ORTHO05D000131 2.7e-07 58.2 47 57.4
Atru.chr3.2179 Acer truncatum HOM05D000214 ORTHO05D000131 3.6e-07 57.8 41 65.9
TWI53G0029 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 3.6e-07 57.8 51 52.9
TWI60G0693 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 3.6e-07 57.8 51 52.9
PSO384G3998 Papaver somniferum HOM05D000214 ORTHO05D000131 4.6e-07 57.4 51 52.9
Rhsim13G0218800 Rhododendron simsii HOM05D000214 ORTHO05D000131 4.6e-07 57.4 51 47.1
TWI73G0294 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 4.6e-07 57.4 51 52.9
PSO541G4567 Papaver somniferum HOM05D000214 ORTHO05D000131 6.1e-07 57.0 51 52.9
Atru.chr11.100 Acer truncatum HOM05D000214 ORTHO05D000131 7.9e-07 56.6 50 58.0
Atru.chr12.1920 Acer truncatum HOM05D000214 ORTHO05D000131 7.9e-07 56.6 54 53.7
Atru.chr4.1413 Acer truncatum HOM05D000214 ORTHO05D000131 7.9e-07 56.6 51 56.9
Atru.chr8.364 Acer truncatum HOM05D000214 ORTHO05D000131 7.9e-07 56.6 50 58.0
Lj1g0010084 Lotus japonicus HOM05D000214 ORTHO05D000131 7.9e-07 56.6 55 52.7
Lj4g0023000 Lotus japonicus HOM05D000214 ORTHO05D000131 7.9e-07 56.6 59 52.5
Lj1g0003300 Lotus japonicus HOM05D000214 ORTHO05D000131 1.0e-06 56.2 51 56.9
PSO063G3103 Papaver somniferum HOM05D000214 ORTHO05D000131 1.0e-06 56.2 51 52.9
Atru.chr1.2140 Acer truncatum HOM05D000214 ORTHO05D000131 1.4e-06 55.8 51 51.0
Atru.chr13.1768 Acer truncatum HOM05D000214 ORTHO05D000131 1.4e-06 55.8 61 50.8
Lj1g0005097 Lotus japonicus HOM05D000214 ORTHO05D000131 1.4e-06 55.8 71 45.1
Rhsim09G0030600 Rhododendron simsii HOM05D000214 ORTHO05D000131 1.4e-06 55.8 51 47.1
Atru.chr11.1167 Acer truncatum HOM05D000214 ORTHO05D000131 1.8e-06 55.5 50 56.0
Atru.chr6.861 Acer truncatum HOM05D000214 ORTHO05D000131 1.8e-06 55.5 50 58.0
Lj2g0010710 Lotus japonicus HOM05D000214 ORTHO05D000131 1.8e-06 55.5 55 52.7
Atru.chr4.831 Acer truncatum HOM05D000214 ORTHO05D000131 2.3e-06 55.1 50 58.0
CANSAT25G1277 Cannabis sativa HOM05D000214 ORTHO05D000131 2.3e-06 55.1 53 50.9
FvH4_5g29682 Fragaria vesca HOM05D000214 ORTHO05D000131 2.3e-06 55.1 51 54.9
Lj2g0017664 Lotus japonicus HOM05D000214 ORTHO05D000131 2.3e-06 55.1 59 50.8
CARHR180780 Cardamine hirsuta HOM05D000214 ORTHO05D000131 3.0e-06 54.7 50 48.0
TWI23G0405 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 3.9e-06 54.3 51 51.0
Atru.chr1.1882 Acer truncatum HOM05D000214 ORTHO05D000131 5.1e-06 53.9 51 49.0
Atru.chr1.1933 Acer truncatum HOM05D000214 ORTHO05D000131 5.1e-06 53.9 51 49.0
LjContig00141g0024663 Lotus japonicus HOM05D000214 ORTHO05D000131 5.1e-06 53.9 49 59.2
SHI01360 Sapria himalayana HOM05D000214 ORTHO05D000131 5.1e-06 53.9 46 60.9
Lj2g0003740 Lotus japonicus HOM05D000214 ORTHO05D000131 6.7e-06 53.5 49 57.1
SHI18828 Sapria himalayana HOM05D000214 ORTHO05D000131 6.7e-06 53.5 51 56.9
BcaC09g50786 Brassica carinata HOM05D000214 ORTHO05D000131 8.8e-06 53.1 53 43.4
CANSAT35G0353 Cannabis sativa HOM05D000214 ORTHO05D000131 8.8e-06 53.1 50 54.0
Lj5g0015099 Lotus japonicus HOM05D000214 ORTHO05D000131 8.8e-06 53.1 51 52.9
TWI31G1070 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 8.8e-06 53.1 51 52.9
TWI60G0165 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 8.8e-06 53.1 52 44.2


User provided reference genes

Program Settings