Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold9G05073 Striga asiatica HOM05D000361 ORTHO05D007806 3.2e-56 221.5 109 100.0
SGA_v2.0_scaffold126G33895 Striga asiatica HOM05D000361 ORTHO05D007806 1.8e-19 99.4 71 80.3
Thecc.05G053700 Theobroma cacao HOM05D000361 ORTHO05D007806 1.5e-16 89.7 71 71.8
Duzib128G0222 Durio zibethinus HOM05D000361 ORTHO05D007806 2.5e-16 89.0 71 71.8
Eucgr.A01177 Eucalyptus grandis HOM05D000361 ORTHO05D007806 2.5e-16 89.0 71 71.8
Hma1.2p1_0111F.1_g053870 Hydrangea macrophylla HOM05D000361 ORTHO05D007806 3.3e-16 88.6 71 71.8
Sc07g0006240 Simmondsia chinensis HOM05D000361 ORTHO05D007806 4.3e-16 88.2 71 71.8
ClCG10G020570 Citrullus lanatus HOM05D000361 ORTHO05D007806 5.6e-16 87.8 71 69.0
Migut.J00416 Erythranthe guttata HOM05D000361 ORTHO05D007806 5.6e-16 87.8 71 71.8
Gohir.D01G204700 Gossypium hirsutum HOM05D000361 ORTHO05D007806 7.3e-16 87.4 71 70.4
Gorai.002G248900 Gossypium raimondii HOM05D000361 ORTHO05D007806 7.3e-16 87.4 71 70.4
MSTRG.5719 Avicennia marina HOM05D000361 ORTHO05D007806 9.5e-16 87.0 71 70.4
Phvul.001G174700 Phaseolus vulgaris HOM05D000361 ORTHO05D007806 1.2e-15 86.7 71 66.2
QL07p045302 Quercus lobata HOM05D000361 ORTHO05D007806 1.2e-15 86.7 71 70.4
TAR636G0149 Trochodendron aralioides HOM05D000361 ORTHO05D007806 1.2e-15 86.7 71 69.0
Ca_08824_v3 Cicer arietinum L. HOM05D000361 ORTHO05D007806 2.1e-15 85.9 71 66.2
Cc06_g03540 Coffea canephora HOM05D000361 ORTHO05D007806 2.1e-15 85.9 71 69.0
Nn2g10649 Nelumbo nucifera HOM05D000361 ORTHO05D007806 2.8e-15 85.5 71 69.0
Nitab4.5_0001142g0060 Nicotiana tabacum HOM05D000361 ORTHO05D007806 2.8e-15 85.5 71 69.0
Nitab4.5_0009766g0010 Nicotiana tabacum HOM05D000361 ORTHO05D007806 2.8e-15 85.5 71 69.0
arahy.Tifrunner.gnm1.ann1.C871DQ Arachis hypogaea HOM05D000361 ORTHO05D007806 3.6e-15 85.1 71 66.2
arahy.Tifrunner.gnm1.ann1.SD4I8G Arachis hypogaea HOM05D000361 ORTHO05D007806 3.6e-15 85.1 71 66.2
Cfa017506 Carpinus fangiana HOM05D000361 ORTHO05D007806 3.6e-15 85.1 71 69.0
CiPaw.09G180100 Carya illinoinensis HOM05D000361 ORTHO05D007806 3.6e-15 85.1 71 69.0
Haze_20652 Corylus avellana HOM05D000361 ORTHO05D007806 3.6e-15 85.1 71 69.0
MD04G1104500 Malus domestica HOM05D000361 ORTHO05D007806 3.6e-15 85.1 71 67.6
Hund20156 Selenicereus undatus HOM05D000361 ORTHO05D007806 3.6e-15 85.1 71 69.0
CsaV3_3G035520 Cucumis sativus L. HOM05D000361 ORTHO05D007806 4.7e-15 84.7 71 67.6
Peaxi162Scf00005g04713 Petunia axillaris HOM05D000361 ORTHO05D007806 4.7e-15 84.7 71 67.6
MELO3C009313.2 Cucumis melo HOM05D000361 ORTHO05D007806 6.1e-15 84.3 71 67.6
Lj1g0004431 Lotus japonicus HOM05D000361 ORTHO05D007806 6.1e-15 84.3 71 64.8
TAR636G0796 Trochodendron aralioides HOM05D000361 ORTHO05D007806 6.1e-15 84.3 74 64.9
CANSAT80G1962 Cannabis sativa HOM05D000361 ORTHO05D007806 8.0e-15 84.0 71 66.2
CAN.G608.18 Capsicum annuum HOM05D000361 ORTHO05D007806 8.0e-15 84.0 71 67.6
Manes.08G003200 Manihot esculenta HOM05D000361 ORTHO05D007806 1.0e-14 83.6 71 69.0
PGR004G1754 Punica granatum HOM05D000361 ORTHO05D007806 1.0e-14 83.6 71 69.0
Solyc09g007330.4 Solanum lycopersicum HOM05D000361 ORTHO05D007806 1.0e-14 83.6 71 67.6
Sopen09g002210 Solanum pennellii HOM05D000361 ORTHO05D007806 1.0e-14 83.6 71 67.6
MBI14_g47376_MAGBIO Magnolia biondii HOM05D000361 ORTHO05D007806 1.4e-14 83.2 71 67.6
Medtr7g061220 Medicago truncatula HOM05D000106 ORTHO05D001887 1.4e-14 83.2 71 63.4
Medtr7g100680 Medicago truncatula HOM05D000361 ORTHO05D007806 1.4e-14 83.2 71 63.4
RcHm_v2.0_Chr3g0468711 Rosa chinensis HOM05D000361 ORTHO05D007806 1.8e-14 82.8 71 69.0
TWI74G0816 Tripterygium wilfordii HOM05D000361 ORTHO05D007806 1.8e-14 82.8 71 66.2
Atru.chr8.2554 Acer truncatum HOM05D000361 ORTHO05D007806 2.3e-14 82.4 71 67.6
FAN02G4129 Fragaria x ananassa HOM05D000361 ORTHO05D007806 2.3e-14 82.4 71 67.6
FAN09G3820 Fragaria x ananassa HOM05D000361 ORTHO05D007806 2.3e-14 82.4 71 67.6
FAN14G3803 Fragaria x ananassa HOM05D000361 ORTHO05D007806 2.3e-14 82.4 71 67.6
Glyma.19G178600 Glycine max HOM05D000361 ORTHO05D007806 2.3e-14 82.4 71 63.4
Oeu029422.1 Olea europaea HOM05D000361 ORTHO05D007806 2.3e-14 82.4 71 67.6
TPR.G36915 Trifolium pratense HOM05D000361 ORTHO05D007806 2.3e-14 82.4 71 63.4
Actinidia04697 Actinidia chinensis HOM05D000361 ORTHO05D007806 3.0e-14 82.0 71 66.2
AUR62042605 Chenopodium quinoa HOM05D000361 ORTHO05D007806 4.0e-14 81.6 71 66.2
Sed0028064 Sechium edule HOM05D000361 ORTHO05D007806 4.0e-14 81.6 71 64.8
GSVIVG01025535001 Vitis vinifera HOM05D000361 ORTHO05D007806 4.0e-14 81.6 71 64.8
Lj2C107G5 Lonicera japonica HOM05D000361 ORTHO05D007806 5.2e-14 81.3 71 67.6
VMungo1383G2364 Vigna mungo HOM05D000361 ORTHO05D007806 5.2e-14 81.3 95 52.6
BraA05t22721Z Brassica rapa HOM05D000361 ORTHO05D007806 6.8e-14 80.9 71 63.4
Sabra06G0103500 Salix brachista HOM05D000361 ORTHO05D007806 6.8e-14 80.9 71 66.2
EL10Ac7g17349 Beta vulgaris HOM05D000361 ORTHO05D007806 8.9e-14 80.5 71 64.8
AUR62040504 Chenopodium quinoa HOM05D000361 ORTHO05D007806 8.9e-14 80.5 71 64.8
ECA233G2985 Erigeron canadensis HOM05D000361 ORTHO05D007806 8.9e-14 80.5 71 63.4
Thhalv10020112m.g Eutrema salsugineum HOM05D000361 ORTHO05D007806 8.9e-14 80.5 71 64.8
Lalb_Chr20g0112951 Lupinus albus HOM05D000361 ORTHO05D007806 8.9e-14 80.5 71 62.0
SHI12574 Sapria himalayana HOM05D000361 ORTHO05D007806 8.9e-14 80.5 71 67.6
AL3G20870 Arabidopsis lyrata HOM05D000361 ORTHO05D007806 1.2e-13 80.1 71 63.4
AT3G09660 Arabidopsis thaliana HOM05D000361 ORTHO05D007806 1.2e-13 80.1 71 63.4
BcaC05g29691 Brassica carinata HOM05D000361 ORTHO05D007806 1.2e-13 80.1 71 62.0
A05p39400 Brassica napus HOM05D000361 ORTHO05D007806 1.2e-13 80.1 71 62.0
C05p58430 Brassica napus HOM05D000361 ORTHO05D007806 1.2e-13 80.1 71 62.0
BolC5t34495H Brassica oleracea HOM05D000361 ORTHO05D007806 1.2e-13 80.1 71 62.0
Carub.0003s0875 Capsella rubella HOM05D000361 ORTHO05D007806 1.2e-13 80.1 71 63.4
Psat3g045560 Pisum sativum HOM05D000361 ORTHO05D007806 1.2e-13 80.1 71 63.4
Sp3g07990 Schrenkiella parvula HOM05D000361 ORTHO05D007806 1.2e-13 80.1 71 63.4
Cpa.g.sc114.44 Carica papaya HOM05D000361 ORTHO05D007806 1.5e-13 79.7 71 64.8
FAN05G4916 Fragaria x ananassa HOM05D000361 ORTHO05D007806 1.5e-13 79.7 71 66.2
PSO339G3031 Papaver somniferum HOM05D000361 ORTHO05D007806 1.5e-13 79.7 71 64.8
PSO063G5136 Papaver somniferum HOM05D000361 ORTHO05D007806 2.0e-13 79.3 71 64.8
Potri.006G131900 Populus trichocarpa HOM05D000361 ORTHO05D007806 2.0e-13 79.3 71 64.8
CARHR084070 Cardamine hirsuta HOM05D000361 ORTHO05D007806 2.6e-13 79.0 71 62.0
Ah.08g211920 Amaranthus hybridus HOM05D000361 ORTHO05D007806 3.4e-13 78.6 71 62.0
Ciclev10013573m.g Citrus clementina HOM05D000361 ORTHO05D007806 3.4e-13 78.6 71 66.2
MBI14_g45130_MAGBIO Magnolia biondii HOM05D000361 ORTHO05D007806 3.4e-13 78.6 69 66.7
THA.LOC104816318 Tarenaya hassleriana HOM05D000361 ORTHO05D007806 3.4e-13 78.6 71 63.4
unitig_578.g15710 Utricularia gibba HOM05D000361 ORTHO05D007806 3.4e-13 78.6 71 62.0
Aqoxy4G03188 Aquilegia oxysepala HOM05D000361 ORTHO05D007806 5.8e-13 77.8 71 66.2
CDE04G3548 Ceratophyllum demersum HOM05D000361 ORTHO05D007806 7.5e-13 77.4 71 59.2
Aa31LG3G2080 Aethionema arabicum HOM05D000361 ORTHO05D007806 1.3e-12 76.6 71 63.4
vmacro20063 Vaccinium macrocarpon HOM05D000361 ORTHO05D007806 1.7e-12 76.3 71 63.4
RhsimUnG0118500 Rhododendron simsii HOM05D000361 ORTHO05D007806 2.2e-12 75.9 71 64.8
HanXRQChr13g0399761 Helianthus annuus HOM05D000361 ORTHO05D007806 2.9e-12 75.5 71 62.0
ATR1159G085 Amborella trichopoda HOM05D000361 ORTHO05D007806 1.1e-11 73.6 71 57.7
SEGI_37013 Sequoiadendron giganteum HOM05D000361 ORTHO05D007806 5.4e-11 71.2 71 56.3
Sopen04g033730 Solanum pennellii HOM05D005164 ORTHO05D006398 2.3e-09 65.9 65 60.0
Mapoly0006s0301 Marchantia polymorpha HOM05D000361 ORTHO05D007806 2.5e-08 62.4 71 50.7
Pp3c24_12060 Physcomitrium patens HOM05D000361 ORTHO05D007806 4.7e-07 58.2 71 45.1
SMO356G0297 Selaginella moellendorffii HOM05D000361 ORTHO05D007806 6.2e-07 57.8 71 45.1
Lsat_1_v5_gn_6_29641 Lactuca sativa HOM05D000361 ORTHO05D007806 1.4e-06 56.6 71 46.5


User provided reference genes

Program Settings