Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold9G05066 Striga asiatica HOM05D005684 ORTHO05D007427 9.9e-155 550.1 273 100.0
Migut.H01837 Erythranthe guttata HOM05D005684 ORTHO05D007427 1.6e-128 463.0 270 87.4
MSTRG.12968 Avicennia marina HOM05D005684 ORTHO05D007427 7.9e-128 460.7 271 87.5
Cc05_g13580 Coffea canephora HOM05D005684 ORTHO05D007427 1.8e-124 449.5 270 85.2
Dinv22273 Davidia involucrata HOM05D005684 ORTHO05D007427 1.2e-123 446.8 270 84.4
Peaxi162Scf00387g00210 Petunia axillaris HOM05D005684 ORTHO05D007427 3.4e-123 445.3 270 83.3
Nitab4.5_0005048g0050 Nicotiana tabacum HOM05D005684 ORTHO05D007427 3.8e-122 441.8 270 82.2
Sopen10g002270 Solanum pennellii HOM05D005684 ORTHO05D007427 3.8e-122 441.8 270 82.2
Actinidia35335 Actinidia chinensis HOM05D005684 ORTHO05D007427 5.0e-122 441.4 270 83.3
Actinidia10725 Actinidia chinensis HOM05D005684 ORTHO05D007427 6.5e-122 441.0 270 83.3
HanXRQChr11g0336331 Helianthus annuus HOM05D005684 ORTHO05D007427 8.5e-122 440.7 270 82.6
Lj1A870G92 Lonicera japonica HOM05D005684 ORTHO05D007427 1.1e-121 440.3 269 83.3
Solyc10g006320.3 Solanum lycopersicum HOM05D005684 ORTHO05D007427 1.1e-121 440.3 270 81.9
PGSC0003DMG400014423 Solanum tuberosum HOM05D005684 ORTHO05D007427 1.4e-121 439.9 270 81.9
ECA236G3763 Erigeron canadensis HOM05D005684 ORTHO05D007427 4.2e-121 438.3 270 82.6
Lsat_1_v5_gn_7_109480 Lactuca sativa HOM05D005684 ORTHO05D007427 5.5e-121 438.0 272 81.6
FAN11G1729 Fragaria x ananassa HOM05D005684 ORTHO05D007427 7.9e-120 434.1 265 82.3
Eucgr.F03458 Eucalyptus grandis HOM05D005684 ORTHO05D007427 1.0e-119 433.7 265 82.3
TPR.G16583 Trifolium pratense HOM05D005684 ORTHO05D007427 1.8e-119 433.0 271 81.2
PSO170G3986 Papaver somniferum HOM05D005684 ORTHO05D007427 3.9e-119 431.8 269 80.7
VMungo0540G0423 Vigna mungo HOM05D005684 ORTHO05D007427 6.7e-119 431.0 269 81.8
Medtr3g051210 Medicago truncatula HOM05D005684 ORTHO05D007427 1.5e-118 429.9 271 80.4
Oeu062595.4 Olea europaea HOM05D005684 ORTHO05D007427 1.5e-118 429.9 357 65.8
Potri.001G424600 Populus trichocarpa HOM05D005684 ORTHO05D007427 2.0e-118 429.5 269 80.3
CANSAT21G0158 Cannabis sativa HOM05D005684 ORTHO05D007427 2.5e-118 429.1 269 79.9
TWI38G0783 Tripterygium wilfordii HOM05D005684 ORTHO05D007427 2.5e-118 429.1 269 80.3
Ca_14720_v3 Cicer arietinum L. HOM05D005684 ORTHO05D007427 3.3e-118 428.7 271 80.4
FvH4_3g22390 Fragaria vesca HOM05D005684 ORTHO05D007427 3.3e-118 428.7 265 81.5
Lalb_Chr06g0171921 Lupinus albus HOM05D005684 ORTHO05D007427 3.3e-118 428.7 269 80.7
Sc16g0006290 Simmondsia chinensis HOM05D005684 ORTHO05D007427 3.3e-118 428.7 265 81.5
Cpa.g.sc97.28 Carica papaya HOM05D005684 ORTHO05D007427 5.7e-118 427.9 275 80.4
Aqoxy7G03212 Aquilegia oxysepala HOM05D005684 ORTHO05D007427 7.4e-118 427.6 268 80.2
CiPaw.12G128600 Carya illinoinensis HOM05D005684 ORTHO05D007427 7.4e-118 427.6 269 80.3
ClCG10G005500 Citrullus lanatus HOM05D005684 ORTHO05D007427 7.4e-118 427.6 272 79.0
PSO017G1132 Papaver somniferum HOM05D005684 ORTHO05D007427 7.4e-118 427.6 269 79.9
FAN21G0196 Fragaria x ananassa HOM05D005684 ORTHO05D007427 9.7e-118 427.2 265 81.1
Glyma.08G314600 Glycine max HOM05D005684 ORTHO05D007427 9.7e-118 427.2 269 80.7
Manes.03G124800 Manihot esculenta HOM05D005684 ORTHO05D007427 9.7e-118 427.2 269 79.9
RcHm_v2.0_Chr5g0039061 Rosa chinensis HOM05D005684 ORTHO05D007427 1.7e-117 426.4 265 81.1
TAR383G0098 Trochodendron aralioides HOM05D005684 ORTHO05D007427 2.2e-117 426.0 269 81.4
arahy.Tifrunner.gnm1.ann1.A1QMDX Arachis hypogaea HOM05D005684 ORTHO05D007427 3.7e-117 425.2 269 80.3
arahy.Tifrunner.gnm1.ann1.G9AZJ3 Arachis hypogaea HOM05D005684 ORTHO05D007427 3.7e-117 425.2 269 80.3
Phvul.006G040700 Phaseolus vulgaris HOM05D005684 ORTHO05D007427 3.7e-117 425.2 269 81.0
GSVIVG01037615001 Vitis vinifera HOM05D005684 ORTHO05D007427 6.3e-117 424.5 265 81.1
Ciclev10009283m.g Citrus clementina HOM05D005684 ORTHO05D007427 8.2e-117 424.1 269 79.9
Lj6g0016495 Lotus japonicus HOM05D005684 ORTHO05D007427 8.2e-117 424.1 264 80.7
CsaV3_3G005220 Cucumis sativus L. HOM05D005684 ORTHO05D007427 1.1e-116 423.7 272 78.7
MD03G1205400 Malus domestica HOM05D005684 ORTHO05D007427 1.4e-116 423.3 265 80.4
Manes.15G073300 Manihot esculenta HOM05D005684 ORTHO05D007427 1.4e-116 423.3 269 78.8
Gohir.A01G078600 Gossypium hirsutum HOM05D005684 ORTHO05D007427 1.8e-116 422.9 270 79.6
Carub.0007s1380 Capsella rubella HOM05D005684 ORTHO05D007427 2.4e-116 422.5 269 78.4
Glyma.18G099600 Glycine max HOM05D005684 ORTHO05D007427 3.1e-116 422.2 269 80.3
PGR031G1629 Punica granatum HOM05D005684 ORTHO05D007427 3.1e-116 422.2 272 78.3
Gohir.D01G065700 Gossypium hirsutum HOM05D005684 ORTHO05D007427 4.1e-116 421.8 270 79.3
Gorai.002G087600 Gossypium raimondii HOM05D005684 ORTHO05D007427 4.1e-116 421.8 270 79.3
vmacro09729 Vaccinium macrocarpon HOM05D005684 ORTHO05D007427 4.1e-116 421.8 290 76.2
Medtr7g033650 Medicago truncatula HOM05D005684 ORTHO05D007427 5.3e-116 421.4 271 79.3
ATR0749G094 Amborella trichopoda HOM05D005684 ORTHO05D007427 6.9e-116 421.0 265 79.2
Thhalv10014489m.g Eutrema salsugineum HOM05D005684 ORTHO05D007427 6.9e-116 421.0 265 79.6
THA.LOC104817661 Tarenaya hassleriana HOM05D005684 ORTHO05D007427 6.9e-116 421.0 269 78.1
Aa31LG3G10790 Aethionema arabicum HOM05D005684 ORTHO05D007427 1.2e-115 420.2 270 78.5
Sp7g25020 Schrenkiella parvula HOM05D005684 ORTHO05D007427 2.0e-115 419.5 268 78.4
CARHR234690 Cardamine hirsuta HOM05D005684 ORTHO05D007427 2.6e-115 419.1 269 77.3
Nn8g40268 Nelumbo nucifera HOM05D005684 ORTHO05D007427 4.5e-115 418.3 265 79.2
QL09p032912 Quercus lobata HOM05D005684 ORTHO05D007427 4.5e-115 418.3 266 79.3
MD11G1221300 Malus domestica HOM05D005684 ORTHO05D007427 1.7e-114 416.4 265 79.6
Sed0015085 Sechium edule HOM05D005684 ORTHO05D007427 1.7e-114 416.4 270 78.1
QL08p011467 Quercus lobata HOM05D005684 ORTHO05D007427 2.2e-114 416.0 266 79.7
BcaC06g32714 Brassica carinata HOM05D005684 ORTHO05D007427 2.9e-114 415.6 268 77.2
BolC7t46008H Brassica oleracea HOM05D005684 ORTHO05D007427 2.9e-114 415.6 268 77.2
AL7G25790 Arabidopsis lyrata HOM05D005684 ORTHO05D007427 5.0e-114 414.8 269 77.0
AT4G27040 Arabidopsis thaliana HOM05D005684 ORTHO05D007427 5.0e-114 414.8 269 77.0
A03p57030 Brassica napus HOM05D005684 ORTHO05D007427 5.0e-114 414.8 268 77.2
C07p55040 Brassica napus HOM05D005684 ORTHO05D007427 5.0e-114 414.8 268 77.2
RhsimUnG0251500 Rhododendron simsii HOM05D001404 ORTHO05D002309 5.0e-114 414.8 257 82.5
Duzib170G0103 Durio zibethinus HOM05D005684 ORTHO05D007427 6.5e-114 414.5 270 78.1
Thhalv10026070m.g Eutrema salsugineum HOM05D005684 ORTHO05D007427 6.5e-114 414.5 268 76.9
QL08p011589 Quercus lobata HOM05D005684 ORTHO05D007427 6.5e-114 414.5 266 79.3
BraA03t14772Z Brassica rapa HOM05D005684 ORTHO05D007427 8.5e-114 414.1 268 76.9
MBI15_g26086_MAGBIO Magnolia biondii HOM05D005684 ORTHO05D007427 8.5e-114 414.1 266 78.6
A01p18200 Brassica napus HOM05D005684 ORTHO05D007427 1.9e-113 412.9 268 76.9
BraA01t01775Z Brassica rapa HOM05D005684 ORTHO05D007427 1.9e-113 412.9 268 76.9
CAN.G1781.5 Capsicum annuum HOM05D005684 ORTHO05D007427 1.2e-112 410.2 254 81.1
COL.COLO4_09643 Corchorus olitorius HOM05D005684 ORTHO05D007427 2.7e-112 409.1 270 78.1
BcaC09g50622 Brassica carinata HOM05D005684 ORTHO05D007427 4.7e-112 408.3 268 76.5
SEGI_16862 Sequoiadendron giganteum HOM05D005684 ORTHO05D007427 3.3e-110 402.1 268 74.3
Sabra16G0288400 Salix brachista HOM05D005684 ORTHO05D007427 7.4e-110 401.0 316 68.4
Nitab4.5_0001393g0150 Nicotiana tabacum HOM05D005684 ORTHO05D007427 2.8e-109 399.1 270 75.9
Cfa020373 Carpinus fangiana HOM05D005684 ORTHO05D007427 3.7e-109 398.7 253 78.7
Aa31LG5G10350 Aethionema arabicum HOM05D005684 ORTHO05D007427 3.1e-108 395.6 315 65.7
Haze_09656 Corylus avellana HOM05D005684 ORTHO05D007427 2.0e-107 392.9 269 75.8
Os09g0529700 Oryza sativa ssp. japonica HOM05D005684 ORTHO05D007427 2.0e-107 392.9 269 73.6
Hma1.2p1_0673F.1_g201210 Hydrangea macrophylla HOM05D005684 ORTHO05D007427 5.0e-106 388.3 278 73.7
Os11g0670700 Oryza sativa ssp. japonica HOM05D005684 ORTHO05D007427 1.1e-105 387.1 269 72.5
SMO232G0102 Selaginella moellendorffii HOM05D005684 ORTHO05D007427 2.0e-102 376.3 269 68.0
CDE08G1370 Ceratophyllum demersum HOM05D005684 ORTHO05D007427 1.0e-98 364.0 265 70.2
BolC1t02253H Brassica oleracea HOM05D005684 ORTHO05D007427 3.8e-98 362.1 240 74.6
HPP92_001822 Vanilla planifolia HOM05D005684 ORTHO05D007427 9.4e-97 357.5 237 76.8
Mapoly0007s0150 Marchantia polymorpha HOM05D005684 ORTHO05D007427 4.7e-96 355.1 265 65.3
Pp3c10_13560 Physcomitrium patens HOM05D005684 ORTHO05D007427 6.1e-96 354.8 266 68.4
BolC1t02251H Brassica oleracea HOM05D005684 ORTHO05D007427 3.1e-92 342.4 252 69.4
AUR62020473 Chenopodium quinoa HOM05D005684 ORTHO05D007427 9.1e-92 340.9 265 66.4
Prupe.4G210400 Prunus persica HOM05D005684 ORTHO05D007427 3.8e-90 335.5 265 67.5
EL10Ac4g07848 Beta vulgaris HOM05D005684 ORTHO05D007427 2.3e-87 326.2 265 66.0
CBR_g28043 Chara braunii HOM05D005684 ORTHO05D007427 2.3e-87 326.2 269 61.0
FAN16G3416 Fragaria x ananassa HOM05D005684 ORTHO05D007427 3.4e-86 322.4 210 79.0
SEGI_13452 Sequoiadendron giganteum HOM05D005684 ORTHO05D007427 1.8e-84 316.6 230 71.3
Psat5g180640 Pisum sativum HOM05D005684 ORTHO05D007427 1.4e-79 300.4 202 75.2
Zm00001eb103240 Zea mays HOM05D005684 ORTHO05D007427 4.0e-79 298.9 211 73.0
AUR62015738 Chenopodium quinoa HOM05D005684 ORTHO05D007427 8.3e-77 291.2 339 50.4
Cre17.g706650 Chlamydomonas reinhardtii HOM05D005684 ORTHO05D007427 8.0e-72 274.6 269 49.8
Ah.06g186400 Amaranthus hybridus HOM05D005684 ORTHO05D007427 1.4e-68 263.8 229 62.4
MELO3C032233.2 Cucumis melo HOM05D005684 ORTHO05D007427 1.7e-66 256.9 179 74.9
C01p23200 Brassica napus HOM05D005684 ORTHO05D007427 3.0e-66 256.1 202 65.8
Duzib213G0140 Durio zibethinus HOM05D005684 ORTHO05D007427 8.9e-63 244.6 235 59.6
MCO16G427 Micromonas commoda HOM05D005684 ORTHO05D007427 3.4e-62 242.7 278 46.0
AagrBONN_evm.TU.Sc2ySwM_228.646 Anthoceros agrestis HOM05D005684 ORTHO05D007427 4.1e-60 235.7 176 67.6
CAN.G915.10 Capsicum annuum HOM05D005684 ORTHO05D007427 9.2e-60 234.6 220 59.1
TAR626G1586 Trochodendron aralioides HOM05D005684 ORTHO05D007427 2.9e-53 213.0 120 86.7
Thecc.07G042900 Theobroma cacao HOM05D005684 ORTHO05D007427 6.4e-53 211.8 270 48.1
TAR626G0395 Trochodendron aralioides HOM05D005684 ORTHO05D007427 2.5e-49 199.9 99 97.0
GSVIVG01037619001 Vitis vinifera HOM05D005684 ORTHO05D007427 2.4e-47 193.4 110 83.6
MELO3C031910.2 Cucumis melo HOM05D005684 ORTHO05D007427 1.7e-42 177.2 98 84.7
PRCOL_00005955 Prasinoderma coloniale HOM05D005684 ORTHO05D007427 3.9e-42 176.0 277 41.5
PGR142G1953 Punica granatum HOM05D005684 ORTHO05D007427 1.9e-41 173.7 98 82.7
C01p23160 Brassica napus HOM05D005684 ORTHO05D007427 1.7e-37 160.6 93 81.7
Dinv40739 Davidia involucrata HOM05D005684 ORTHO05D007427 6.4e-37 158.7 182 53.8
Prupe.5G052500 Prunus persica HOM05D005684 ORTHO05D007427 1.9e-36 157.1 90 83.3
Cfa026637 Carpinus fangiana HOM05D005684 ORTHO05D007427 7.8e-35 151.8 277 32.1
CAN.G1192.5 Capsicum annuum HOM05D005684 ORTHO05D000076 1.9e-28 130.6 82 79.3
SEGI_35638 Sequoiadendron giganteum HOM05D005684 ORTHO05D007427 1.8e-18 97.4 61 68.9
HanXRQChr09g0268041 Helianthus annuus HOM05D005684 ORTHO05D007427 8.2e-16 88.6 97 50.5
AagrBONN_evm.TU.Sc2ySwM_340.2023 Anthoceros agrestis HOM05D005684 ORTHO05D007427 2.0e-14 84.0 55 74.5
Hma1.2p1_0212F.1_g090110 Hydrangea macrophylla HOM05D005684 ORTHO05D048316 2.9e-13 80.1 49 75.5
Actinidia05107 Actinidia chinensis HOM05D006458 ORTHO05D008433 1.4e-12 77.8 161 37.3
SEGI_36060 Sequoiadendron giganteum HOM05D005684 ORTHO05D383802 1.3e-10 71.2 55 65.5
GSVIVG01037618001 Vitis vinifera HOM05D005684 ORTHO05D048316 9.7e-09 65.1 30 93.3
Zm00001eb057030 Zea mays HOM05D000424 ORTHO05D000355 3.7e-08 63.2 55 63.6


User provided reference genes

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