Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold9G05058 Striga asiatica HOM05D004411 ORTHO05D005569 1.7e-238 828.9 432 100.0
Migut.H01843 Erythranthe guttata HOM05D004411 ORTHO05D005569 2.4e-118 429.9 432 57.9
MSTRG.12964 Avicennia marina HOM05D004411 ORTHO05D005569 6.0e-114 415.2 435 57.2
SalBow7G1998 Salvia bowleyana HOM05D004411 ORTHO05D005569 7.1e-107 391.7 436 54.1
Oeu021397.1 Olea europaea HOM05D004411 ORTHO05D005569 9.4e-91 338.2 396 51.3
Cc02_g24710 Coffea canephora HOM05D004411 ORTHO05D005569 6.1e-90 335.5 432 47.9
Hma1.2p1_0938F.1_g239200 Hydrangea macrophylla HOM05D004411 ORTHO05D005569 1.8e-89 334.0 427 48.7
Rhsim04G0001700 Rhododendron simsii HOM05D004411 ORTHO05D005569 1.8e-89 334.0 438 49.1
Actinidia35328 Actinidia chinensis HOM05D004411 ORTHO05D005569 2.3e-89 333.6 435 48.0
vmacro09736 Vaccinium macrocarpon HOM05D004411 ORTHO05D005569 3.0e-89 333.2 435 49.0
Dinv22283 Davidia involucrata HOM05D004411 ORTHO05D005569 8.8e-89 331.6 432 49.1
CSS0013783 Camellia sinensis var. sinensis HOM05D004411 ORTHO05D005569 2.5e-88 330.1 437 47.8
Nitab4.5_0009551g0010 Nicotiana tabacum HOM05D004411 ORTHO05D005569 1.3e-87 327.8 450 46.0
GSVIVG01008286001 Vitis vinifera HOM05D004411 ORTHO05D005569 1.3e-87 327.8 434 49.3
Solyc07g064300.3 Solanum lycopersicum HOM05D004411 ORTHO05D005569 1.8e-86 323.9 443 46.0
QL08p011929 Quercus lobata HOM05D004411 ORTHO05D005569 1.2e-85 321.2 439 46.0
QL08p012116 Quercus lobata HOM05D004411 ORTHO05D005569 2.6e-85 320.1 440 45.9
Rhsim04G0000600 Rhododendron simsii HOM05D004411 ORTHO05D005569 2.6e-85 320.1 450 46.2
CAN.G337.104 Capsicum annuum HOM05D004411 ORTHO05D005569 3.4e-85 319.7 438 46.8
Peaxi162Scf00450g00868 Petunia axillaris HOM05D004411 ORTHO05D005569 7.7e-85 318.5 437 45.3
Oeu005458.1 Olea europaea HOM05D004411 ORTHO05D005569 1.0e-84 318.2 447 45.0
unitig_0.g2388 Utricularia gibba HOM05D004411 ORTHO05D005569 1.3e-84 317.8 416 46.6
Dinv40733 Davidia involucrata HOM05D004411 ORTHO05D005569 6.5e-84 315.5 401 49.9
Atru.chr2.3274 Acer truncatum HOM05D004411 ORTHO05D005569 1.5e-80 304.3 451 43.9
TAR627G0926 Trochodendron aralioides HOM05D004411 ORTHO05D005569 3.7e-79 299.7 441 43.8
Ciclev10008629m.g Citrus clementina HOM05D004411 ORTHO05D005569 5.3e-78 295.8 431 45.2
ECA236G1785 Erigeron canadensis HOM05D004411 ORTHO05D005569 1.0e-76 291.6 424 43.9
HanXRQChr11g0336281 Helianthus annuus HOM05D004411 ORTHO05D005569 1.5e-75 287.7 426 44.4
Duzib213G0043 Durio zibethinus HOM05D004411 ORTHO05D005569 1.9e-75 287.3 438 43.8
PGR083G2632 Punica granatum HOM05D004411 ORTHO05D005569 1.9e-75 287.3 440 43.6
RcHm_v2.0_Chr5g0037971 Rosa chinensis HOM05D004411 ORTHO05D005569 7.2e-75 285.4 435 43.2
FvH4_3g22120 Fragaria vesca HOM05D004411 ORTHO05D005569 1.2e-74 284.6 433 42.5
CiPaw.05G090700 Carya illinoinensis HOM05D004411 ORTHO05D005569 2.1e-74 283.9 271 55.7
Lsat_1_v5_gn_7_109101 Lactuca sativa HOM05D004411 ORTHO05D005569 3.0e-73 280.0 389 45.5
PSO210G7535 Papaver somniferum HOM05D004411 ORTHO05D005569 3.0e-73 280.0 438 42.2
Prupe.4G208500 Prunus persica HOM05D004411 ORTHO05D005569 3.0e-73 280.0 435 42.5
TWI38G0098 Tripterygium wilfordii HOM05D004411 ORTHO05D005569 6.7e-73 278.9 441 43.8
Potri.011G136400 Populus trichocarpa HOM05D004411 ORTHO05D005569 8.8e-73 278.5 443 43.8
Gohir.D01G064500 Gossypium hirsutum HOM05D004411 ORTHO05D005569 3.3e-72 276.6 371 45.3
Gorai.002G085400 Gossypium raimondii HOM05D004411 ORTHO05D005569 4.4e-72 276.2 371 45.3
Thecc.07G044400 Theobroma cacao HOM05D004411 ORTHO05D005569 5.7e-72 275.8 443 42.9
CANSAT56G2724 Cannabis sativa HOM05D004411 ORTHO05D005569 1.3e-71 274.6 432 43.1
Eucgr.E01365 Eucalyptus grandis HOM05D004411 ORTHO05D005569 1.7e-71 274.2 425 43.3
Gohir.A01G077000 Gossypium hirsutum HOM05D004411 ORTHO05D005569 2.8e-71 273.5 371 45.8
Hund07317 Selenicereus undatus HOM05D004411 ORTHO05D005569 3.7e-71 273.1 449 42.1
PSO210G6597 Papaver somniferum HOM05D004411 ORTHO05D005569 1.1e-70 271.6 445 41.1
ClCG10G005570 Citrullus lanatus HOM05D004411 ORTHO05D005569 2.2e-68 263.8 431 38.7
Ca_24447_v3 Cicer arietinum L. HOM05D004411 ORTHO05D005569 3.8e-68 263.1 271 52.4
Ca_05663_v3 Cicer arietinum L. HOM05D004411 ORTHO05D005569 1.1e-67 261.5 296 49.3
CsaV3_3G017510 Cucumis sativus L. HOM05D004411 ORTHO05D005569 1.5e-67 261.2 431 39.2
FAN25G3657 Fragaria x ananassa HOM05D006818 ORTHO05D008674 1.9e-67 260.8 440 40.9
Sabra11G0122500 Salix brachista HOM05D004411 ORTHO05D005569 1.9e-67 260.8 473 40.6
TWI38G2195 Tripterygium wilfordii HOM05D004411 ORTHO05D005569 1.9e-67 260.8 292 52.1
MELO3C003591.2 Cucumis melo HOM05D004411 ORTHO05D005569 3.2e-67 260.0 437 39.4
Glyma.08G313000 Glycine max HOM05D004411 ORTHO05D005569 2.1e-66 257.3 296 48.0
MD11G1222400 Malus domestica HOM05D004411 ORTHO05D005569 2.1e-66 257.3 407 43.7
EL10Ac9g22002 Beta vulgaris HOM05D004411 ORTHO05D005569 3.6e-66 256.5 436 41.3
Medtr3g019330 Medicago truncatula HOM05D004411 ORTHO05D005569 6.1e-66 255.8 297 48.1
Sed0027425 Sechium edule HOM05D004411 ORTHO05D005569 1.0e-65 255.0 439 40.1
Sc06g0005160 Simmondsia chinensis HOM05D004411 ORTHO05D005569 1.4e-65 254.6 398 44.2
TAR624G0740 Trochodendron aralioides HOM05D004411 ORTHO05D005569 1.8e-65 254.2 273 53.1
Lj6g0013350 Lotus japonicus HOM05D004411 ORTHO05D005569 2.3e-65 253.8 308 47.7
Psat5g216880 Pisum sativum HOM05D004411 ORTHO05D005569 2.3e-65 253.8 291 49.5
DCAR_008678 Daucus carota HOM05D004411 ORTHO05D005569 1.2e-64 251.5 270 54.4
Atru.chr7.1306 Acer truncatum HOM05D004411 ORTHO05D005569 2.0e-64 250.8 284 50.4
THA.LOC104798777 Tarenaya hassleriana HOM05D004411 ORTHO05D005569 7.5e-64 248.8 432 39.4
TPR.G3855 Trifolium pratense HOM05D004411 ORTHO05D005569 7.5e-64 248.8 286 50.0
PGSC0003DMG402013923 Solanum tuberosum HOM05D004411 ORTHO05D005569 1.7e-63 247.7 441 38.5
Lalb_Chr18g0049751 Lupinus albus HOM05D004411 ORTHO05D005569 6.3e-63 245.7 265 50.9
Thhalv10011488m.g Eutrema salsugineum HOM05D004411 ORTHO05D005569 8.3e-63 245.4 457 37.2
RcHm_v2.0_Chr1g0330851 Rosa chinensis HOM05D004411 ORTHO05D005569 1.4e-62 244.6 237 56.5
CiPaw.11G186800 Carya illinoinensis HOM05D004411 ORTHO05D005569 1.8e-62 244.2 242 55.0
Aa31LG10G3320 Aethionema arabicum HOM05D004411 ORTHO05D005569 4.1e-62 243.0 303 45.9
CARHR040960 Cardamine hirsuta HOM05D004411 ORTHO05D005569 4.1e-62 243.0 294 47.3
arahy.Tifrunner.gnm1.ann1.01DGNM Arachis hypogaea HOM05D004411 ORTHO05D005569 7.0e-62 242.3 279 48.4
Phvul.006G038300 Phaseolus vulgaris HOM05D004411 ORTHO05D005569 9.1e-62 241.9 281 49.1
Medtr4g088440 Medicago truncatula HOM05D004411 ORTHO05D005569 2.7e-61 240.4 271 49.8
AT1G50910 Arabidopsis thaliana HOM05D004411 ORTHO05D005569 3.5e-61 240.0 294 48.0
Nitab4.5_0000397g0320 Nicotiana tabacum HOM05D004411 ORTHO05D005569 3.5e-61 240.0 456 37.1
AL1G58640 Arabidopsis lyrata HOM05D004411 ORTHO05D005569 5.9e-61 239.2 306 45.8
arahy.Tifrunner.gnm1.ann1.7KL5HB Arachis hypogaea HOM05D004411 ORTHO05D005569 1.3e-60 238.0 280 47.1
Lj2g0018498 Lotus japonicus HOM05D004411 ORTHO05D005569 6.5e-60 235.7 271 49.8
Carub.0001s3986 Capsella rubella HOM05D004411 ORTHO05D005569 2.5e-59 233.8 461 36.9
AUR62000402 Chenopodium quinoa HOM05D004411 ORTHO05D005569 4.2e-59 233.0 424 38.0
Glyma.08G318600 Glycine max HOM05D004411 ORTHO05D005569 2.1e-58 230.7 324 44.4
Sp1g37650 Schrenkiella parvula HOM05D004411 ORTHO05D005569 2.7e-58 230.3 458 36.5
FAN21G4008 Fragaria x ananassa HOM05D004411 ORTHO05D005569 5.7e-56 222.6 441 36.3
BcaC08g43264 Brassica carinata HOM05D004411 ORTHO05D005569 1.8e-54 217.6 273 47.3
C06p06080 Brassica napus HOM05D004411 ORTHO05D005569 1.8e-54 217.6 273 47.3
BolC6t35721H Brassica oleracea HOM05D004411 ORTHO05D005569 1.8e-54 217.6 273 47.3
CDE07G0547 Ceratophyllum demersum HOM05D004411 ORTHO05D005569 9.1e-54 215.3 328 42.7
BraA06t23489Z Brassica rapa HOM05D004411 ORTHO05D005569 5.9e-53 212.6 268 47.0
BcaB07g33532 Brassica carinata HOM05D004411 ORTHO05D005569 2.9e-52 210.3 273 46.5
Nn1g07099 Nelumbo nucifera HOM05D004411 ORTHO05D005569 6.6e-52 209.1 205 56.6
Aqoxy3G00168 Aquilegia oxysepala HOM05D004411 ORTHO05D005569 8.6e-52 208.8 274 45.3
FAN16G0093 Fragaria x ananassa HOM05D006818 ORTHO05D008674 3.3e-51 206.8 488 33.6
A06p02820 Brassica napus HOM05D004411 ORTHO05D005569 4.7e-50 203.0 268 45.5
SHI31835 Sapria himalayana HOM05D004411 ORTHO05D005569 5.2e-49 199.5 285 44.6
AUR62006758 Chenopodium quinoa HOM05D004411 ORTHO05D005569 8.9e-49 198.7 440 35.5
Lalb_Chr15g0080391 Lupinus albus HOM05D004411 ORTHO05D005569 1.2e-48 198.4 205 52.7
ATR0564G530 Amborella trichopoda HOM05D004411 ORTHO05D005569 4.4e-48 196.4 229 50.2
Aqoxy7G03937 Aquilegia oxysepala HOM05D004411 ORTHO05D005569 2.2e-47 194.1 274 43.4
AL8G37460 Arabidopsis lyrata HOM05D004411 ORTHO05D005569 4.9e-47 193.0 212 52.4
Nitab4.5_0000622g0210 Nicotiana tabacum HOM05D004411 ORTHO05D005569 2.0e-45 187.6 252 46.4
AL2G19790 Arabidopsis lyrata HOM05D004411 ORTHO05D005569 2.7e-45 187.2 203 52.2
Cpa.g.sc12.166 Carica papaya HOM05D004411 ORTHO05D005569 7.8e-45 185.7 439 35.1
Sopen07g032450 Solanum pennellii HOM05D004411 ORTHO05D005569 8.6e-44 182.2 310 41.3
Zm00001eb317630 Zea mays HOM05D004411 ORTHO05D005569 1.1e-43 181.8 258 41.1
SEGI_26616 Sequoiadendron giganteum HOM05D004411 ORTHO05D005569 1.5e-43 181.4 444 31.3
Zm00001eb253190 Zea mays HOM05D004411 ORTHO05D005569 7.3e-43 179.1 263 41.1
Manes.03G127300 Manihot esculenta HOM05D004411 ORTHO05D005569 1.6e-42 177.9 266 41.4
BolC5t32046H Brassica oleracea HOM05D004411 ORTHO05D005569 2.8e-42 177.2 234 45.7
HPP92_013625 Vanilla planifolia HOM05D004411 ORTHO05D005569 6.2e-42 176.0 269 44.2
BcaB06g26197 Brassica carinata HOM05D004411 ORTHO05D005569 3.1e-41 173.7 279 41.2
Os09g0504900 Oryza sativa ssp. japonica HOM05D004411 ORTHO05D005569 6.8e-41 172.6 236 42.4
PSO210G0554 Papaver somniferum HOM05D004411 ORTHO05D005569 1.2e-40 171.8 296 37.8
Haze_09645 Corylus avellana HOM05D006818 ORTHO05D008674 2.6e-40 170.6 266 39.1
FAN11G0521 Fragaria x ananassa HOM05D006818 ORTHO05D008674 3.4e-40 170.2 428 32.0
PGSC0003DMG401013923 Solanum tuberosum HOM05D004411 ORTHO05D005569 3.2e-38 163.7 199 44.2
BcaB02g11193 Brassica carinata HOM05D004411 ORTHO05D005569 5.4e-38 162.9 268 40.7
C05p33200 Brassica napus HOM05D004411 ORTHO05D005569 7.8e-37 159.1 213 45.5
COL.COLO4_09627 Corchorus olitorius HOM05D004411 ORTHO05D005569 5.6e-35 152.9 308 37.0
Ah.06g195930 Amaranthus hybridus HOM05D004411 ORTHO05D005569 5.2e-33 146.4 299 35.8
ECA236G1239 Erigeron canadensis HOM05D004411 ORTHO05D005569 1.2e-32 145.2 268 37.3
MD03G1208200 Malus domestica HOM05D004411 ORTHO05D005569 1.1e-30 138.7 402 31.8
PSO339G6638 Papaver somniferum HOM05D004411 ORTHO05D005569 3.2e-30 137.1 215 41.4
VMungo1383G2244 Vigna mungo HOM05D004411 ORTHO05D005569 2.3e-25 120.9 142 47.9
Glyma.09G101400 Glycine max HOM05D004411 ORTHO05D005569 5.8e-24 116.3 142 44.4
DCAR_011015 Daucus carota HOM05D004411 ORTHO05D005569 1.3e-23 115.2 204 37.7
Hma1.2p1_3713F.1_g337350 Hydrangea macrophylla HOM05D004411 ORTHO05D005569 1.7e-23 114.8 106 56.6
Cc09_g02490 Coffea canephora HOM05D004411 ORTHO05D005569 1.9e-22 111.3 115 53.0
Cc02_g22100 Coffea canephora HOM05D004411 ORTHO05D005569 4.6e-21 106.7 135 45.2
VMungo0540G0671 Vigna mungo HOM05D004411 ORTHO05D005569 1.0e-20 105.5 125 45.6
VMungo1383G3213 Vigna mungo HOM05D004411 ORTHO05D005569 1.0e-20 105.5 117 47.9
Cc00_g16970 Coffea canephora HOM05D004411 ORTHO05D005569 5.1e-20 103.2 132 47.0
Oeu034511.1 Olea europaea HOM05D004411 ORTHO05D005569 9.6e-19 99.0 102 51.0
Glyma.09G101500 Glycine max HOM05D004411 ORTHO05D005569 5.2e-17 93.2 105 48.6
A05p19860 Brassica napus HOM05D004411 ORTHO05D005569 3.4e-16 90.5 144 41.0
BraA05t20891Z Brassica rapa HOM05D004411 ORTHO05D005569 3.4e-16 90.5 144 41.0
EL10Ac9g22233 Beta vulgaris HOM05D004411 ORTHO05D005569 1.7e-15 88.2 262 31.7
Pp3c25_11530 Physcomitrium patens HOM05D004411 ORTHO05D005569 4.2e-14 83.6 396 26.3
PGSC0003DMG400013925 Solanum tuberosum HOM05D004411 ORTHO05D005569 3.5e-13 80.5 61 62.3
BcaC05g27378 Brassica carinata HOM05D003430 ORTHO05D004809 3.0e-12 77.4 107 43.0
Mapoly0160s0028 Marchantia polymorpha HOM05D004411 ORTHO05D005569 3.9e-12 77.0 231 29.0
SMO367G0149 Selaginella moellendorffii HOM05D004411 ORTHO05D005569 5.6e-11 73.2 290 27.2
GSVIVG01036883001 Vitis vinifera HOM05D004411 ORTHO05D005569 2.1e-10 71.2 55 58.2
AagrBONN_evm.TU.Sc2ySwM_344.3992 Anthoceros agrestis HOM05D004411 ORTHO05D005569 5.3e-09 66.6 114 36.8
arahy.Tifrunner.gnm1.ann1.ZM7UYF Arachis hypogaea HOM05D004411 ORTHO05D005569 9.0e-09 65.9 110 37.3
Haze_07158 Corylus avellana HOM05D004411 ORTHO05D005569 9.0e-09 65.9 69 49.3
arahy.Tifrunner.gnm1.ann1.H97TV8 Arachis hypogaea HOM05D004411 ORTHO05D005569 2.2e-07 61.2 104 34.6
Lalb_Chr15g0080381 Lupinus albus HOM05D004411 ORTHO05D005569 1.1e-06 58.9 102 33.3


User provided reference genes

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