Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold9G04969 Striga asiatica HOM05D061589 ORTHO05D403274 4.0e-69 264.6 130 100.0
SGA_v2.0_scaffold174G39276 Striga asiatica HOM05D061589 ORTHO05D406362 1.9e-31 139.4 104 72.1
SGA_v2.0_scaffold110G31324 Striga asiatica HOM05D001008 ORTHO05D003293 3.2e-10 68.9 67 61.2
MSTRG.16519 Avicennia marina HOM05D001008 ORTHO05D003293 1.6e-09 66.6 71 54.9
unitig_8.g2953 Utricularia gibba HOM05D001008 ORTHO05D003293 2.1e-09 66.2 60 61.7
CAN.G1249.12 Capsicum annuum HOM05D001008 ORTHO05D003293 6.0e-09 64.7 84 44.0
PGSC0003DMG400031113 Solanum tuberosum HOM05D001008 ORTHO05D003293 1.3e-08 63.5 84 44.0
MELO3C019475.2 Cucumis melo HOM05D001008 ORTHO05D003293 2.3e-08 62.8 67 52.2
Peaxi162Scf00907g00001 Petunia axillaris HOM05D001008 ORTHO05D003293 3.9e-08 62.0 84 45.2
CsaV3_3G018840 Cucumis sativus L. HOM05D001008 ORTHO05D003293 5.1e-08 61.6 67 52.2
Rhsim05G0180600 Rhododendron simsii HOM05D001008 ORTHO05D003293 5.1e-08 61.6 78 50.0
Sopen01g033070 Solanum pennellii HOM05D001008 ORTHO05D003293 5.1e-08 61.6 84 44.0
Sed0026076 Sechium edule HOM05D001008 ORTHO05D003293 6.6e-08 61.2 78 46.2
Peaxi162Scf00907g00014 Petunia axillaris HOM05D001008 ORTHO05D003293 8.7e-08 60.8 71 50.7
Migut.B00832 Erythranthe guttata HOM05D001008 ORTHO05D003293 1.1e-07 60.5 78 48.7
PSO782G3732 Papaver somniferum HOM05D001008 ORTHO05D003293 1.1e-07 60.5 92 44.6
Solyc01g081510.4 Solanum lycopersicum HOM05D001008 ORTHO05D003293 1.1e-07 60.5 84 44.0
CANSAT54G2814 Cannabis sativa HOM05D001008 ORTHO05D003293 1.5e-07 60.1 71 47.9
COL.COLO4_11789 Corchorus olitorius HOM05D001008 ORTHO05D003293 1.5e-07 60.1 71 45.1
Nitab4.5_0000792g0100 Nicotiana tabacum HOM05D001008 ORTHO05D003293 1.5e-07 60.1 84 44.0
PSO478G0716 Papaver somniferum HOM05D001008 ORTHO05D003293 1.5e-07 60.1 92 43.5
Cfa005517 Carpinus fangiana HOM05D001008 ORTHO05D003293 1.9e-07 59.7 71 47.9
Duzib132G0325 Durio zibethinus HOM05D001008 ORTHO05D003293 1.9e-07 59.7 60 53.3
Cc02_g22560 Coffea canephora HOM05D001008 ORTHO05D003293 2.5e-07 59.3 84 44.0
FvH4_5g29271 Fragaria vesca HOM05D001008 ORTHO05D003293 2.5e-07 59.3 78 44.9
Nitab4.5_0007787g0020 Nicotiana tabacum HOM05D001008 ORTHO05D003293 2.5e-07 59.3 71 47.9
Cc02_g22550 Coffea canephora HOM05D001008 ORTHO05D003293 3.3e-07 58.9 70 50.0
Dinv24287 Davidia involucrata HOM05D001008 ORTHO05D003293 3.3e-07 58.9 78 46.2
TWI14G0361 Tripterygium wilfordii HOM05D001008 ORTHO05D003293 3.3e-07 58.9 71 47.9
GSVIVG01022917001 Vitis vinifera HOM05D001008 ORTHO05D003293 3.3e-07 58.9 85 40.0
ClCG05G009680 Citrullus lanatus HOM05D001008 ORTHO05D003293 4.3e-07 58.5 67 49.3
CsaV3_3G019040 Cucumis sativus L. HOM05D001008 ORTHO05D003293 4.3e-07 58.5 78 46.2
MD15G1424900 Malus domestica HOM05D001008 ORTHO05D003293 5.6e-07 58.2 71 47.9
RcHm_v2.0_Chr7g0222121 Rosa chinensis HOM05D001008 ORTHO05D003293 5.6e-07 58.2 68 48.5
Lalb_Chr07g0185751 Lupinus albus HOM05D001008 ORTHO05D003293 7.3e-07 57.8 71 49.3
Thecc.02G087300 Theobroma cacao HOM05D001008 ORTHO05D003293 7.3e-07 57.8 71 46.5
Manes.10G128600 Manihot esculenta HOM05D001008 ORTHO05D003293 9.6e-07 57.4 71 46.5
Sc18g0006630 Simmondsia chinensis HOM05D001008 ORTHO05D003293 9.6e-07 57.4 84 40.5
Ciclev10001773m.g Citrus clementina HOM05D001008 ORTHO05D003293 1.3e-06 57.0 71 45.1
Prupe.1G570500 Prunus persica HOM05D001008 ORTHO05D003293 1.3e-06 57.0 71 46.5
TAR626G0228 Trochodendron aralioides HOM05D001008 ORTHO05D003293 1.3e-06 57.0 78 44.9
DCAR_006707 Daucus carota HOM05D001008 ORTHO05D003293 1.6e-06 56.6 71 46.5
Glyma.05G169300 Glycine max HOM05D001008 ORTHO05D003293 1.6e-06 56.6 85 42.4
Aqoxy1G01764 Aquilegia oxysepala HOM05D001008 ORTHO05D003293 2.1e-06 56.2 67 49.3
ECA234G2495 Erigeron canadensis HOM05D001008 ORTHO05D003293 2.1e-06 56.2 82 39.0
Gohir.A13G035100 Gossypium hirsutum HOM05D001008 ORTHO05D003293 2.1e-06 56.2 71 45.1
Medtr8g088900 Medicago truncatula HOM05D001008 ORTHO05D003293 2.1e-06 56.2 78 42.3
AUR62014258 Chenopodium quinoa HOM05D001008 ORTHO05D003293 2.8e-06 55.8 84 39.3
Eucgr.I02726 Eucalyptus grandis HOM05D001008 ORTHO05D003293 3.6e-06 55.5 78 42.3
Thecc.02G087200 Theobroma cacao HOM05D001008 ORTHO05D003293 3.6e-06 55.5 45 55.6
Haze_01687 Corylus avellana HOM05D001008 ORTHO05D003293 4.8e-06 55.1 71 45.1
Gorai.013G037900 Gossypium raimondii HOM05D001008 ORTHO05D003293 4.8e-06 55.1 71 43.7
Potri.001G211500 Populus trichocarpa HOM05D001008 ORTHO05D003293 4.8e-06 55.1 71 47.9
EL10Ac4g08322 Beta vulgaris HOM05D001008 ORTHO05D003293 6.2e-06 54.7 84 39.3
AUR62038480 Chenopodium quinoa HOM05D001008 ORTHO05D003293 6.2e-06 54.7 55 52.7
Haze_01694 Corylus avellana HOM05D001008 ORTHO05D003293 6.2e-06 54.7 71 43.7
VMungo0251G0615 Vigna mungo HOM05D001008 ORTHO05D003293 6.2e-06 54.7 89 39.3
Lsat_1_v5_gn_5_105260 Lactuca sativa HOM05D001008 ORTHO05D003293 8.1e-06 54.3 56 50.0


User provided reference genes

Program Settings