Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold9G04950 Striga asiatica HOM05D004279 ORTHO05D004979 5.0e-168 594.3 300 100.0
Migut.H01911 Erythranthe guttata HOM05D004279 ORTHO05D004979 3.9e-136 488.4 299 82.6
MSTRG.12925 Avicennia marina HOM05D004279 ORTHO05D004979 2.1e-134 482.6 300 81.3
MSTRG.14375 Avicennia marina HOM05D004279 ORTHO05D004979 6.2e-134 481.1 300 81.0
SalBow7G1458 Salvia bowleyana HOM05D004279 ORTHO05D004979 4.6e-129 464.9 298 80.9
Cc05_g12550 Coffea canephora HOM05D004279 ORTHO05D004979 5.6e-127 458.0 300 77.7
Oeu055672.1 Olea europaea HOM05D004279 ORTHO05D004979 2.4e-125 452.6 301 76.7
Oeu008023.1 Olea europaea HOM05D004279 ORTHO05D004979 5.3e-125 451.4 299 75.9
Solyc07g063460.3 Solanum lycopersicum HOM05D004279 ORTHO05D004979 7.6e-124 447.6 298 75.8
Sopen07g031640 Solanum pennellii HOM05D004279 ORTHO05D004979 7.6e-124 447.6 298 75.8
Nitab4.5_0000815g0050 Nicotiana tabacum HOM05D004279 ORTHO05D004979 9.9e-124 447.2 298 75.8
Peaxi162Scf01111g00012 Petunia axillaris HOM05D004279 ORTHO05D004979 9.9e-124 447.2 298 76.2
Nitab4.5_0009177g0010 Nicotiana tabacum HOM05D004279 ORTHO05D004979 2.9e-123 445.7 298 75.5
PGSC0003DMG400019253 Solanum tuberosum HOM05D004279 ORTHO05D004979 8.4e-123 444.1 298 75.5
unitig_0.g2258 Utricularia gibba HOM05D004279 ORTHO05D004979 1.4e-122 443.4 297 75.1
SGA_v2.0_scaffold73G24305 Striga asiatica HOM05D004279 ORTHO05D004979 2.4e-122 442.6 296 76.0
Rhsim04G0018800 Rhododendron simsii HOM05D004279 ORTHO05D004979 1.6e-121 439.9 298 77.5
Actinidia35269 Actinidia chinensis HOM05D004279 ORTHO05D004979 2.7e-121 439.1 300 74.3
Dinv22371 Davidia involucrata HOM05D004279 ORTHO05D004979 1.1e-117 427.2 301 74.4
CSS0001500 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 1.4e-117 426.8 300 74.0
Lj1A851T62 Lonicera japonica HOM05D004279 ORTHO05D004979 1.5e-116 423.3 300 73.3
Hma1.2p1_1143F.1_g261130 Hydrangea macrophylla HOM05D004279 ORTHO05D004979 1.9e-114 416.4 298 73.2
Actinidia18754 Actinidia chinensis HOM05D002936 ORTHO05D004979 4.2e-114 415.2 290 73.8
CSS0025917 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 5.5e-114 414.8 298 71.8
Hma1.2p1_1274F.1_g271930 Hydrangea macrophylla HOM05D004279 ORTHO05D004979 2.1e-113 412.9 298 72.5
Eucgr.F03342 Eucalyptus grandis HOM05D004279 ORTHO05D004979 5.1e-112 408.3 297 71.0
TAR626G0357 Trochodendron aralioides HOM05D004279 ORTHO05D004979 4.3e-111 405.2 300 70.3
HanXRQChr05g0156561 Helianthus annuus HOM05D004279 ORTHO05D004979 1.3e-110 403.7 301 70.4
Dinv08329 Davidia involucrata HOM05D004279 ORTHO05D004979 1.6e-110 403.3 281 74.7
Gohir.D01G054400 Gossypium hirsutum HOM05D004279 ORTHO05D004979 1.6e-110 403.3 295 71.5
Gorai.002G074300 Gossypium raimondii HOM05D004279 ORTHO05D004979 1.6e-110 403.3 295 71.5
PGR031G2155 Punica granatum HOM05D004279 ORTHO05D004979 1.6e-110 403.3 296 71.6
Cpa.g.sc80.101 Carica papaya HOM05D004279 ORTHO05D004979 2.1e-110 402.9 296 72.3
Lsat_1_v5_gn_5_7280 Lactuca sativa HOM05D004279 ORTHO05D004979 8.2e-110 401.0 301 69.1
Prupe.4G187700 Prunus persica HOM05D004279 ORTHO05D004979 8.2e-110 401.0 299 70.6
COL.COLO4_09461 Corchorus olitorius HOM05D004279 ORTHO05D004979 1.1e-109 400.6 295 70.8
FvH4_3g20760 Fragaria vesca HOM05D004279 ORTHO05D004979 1.8e-109 399.8 294 71.1
Gohir.A01G067200 Gossypium hirsutum HOM05D004279 ORTHO05D004979 1.8e-109 399.8 295 71.2
FAN16G2997 Fragaria x ananassa HOM05D004279 ORTHO05D004979 2.4e-109 399.4 294 70.7
FAN11G1457 Fragaria x ananassa HOM05D004279 ORTHO05D004979 4.1e-109 398.7 294 70.7
THA.LOC104810491 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 5.3e-109 398.3 296 72.0
RcHm_v2.0_Chr5g0034991 Rosa chinensis HOM05D004279 ORTHO05D004979 6.9e-109 397.9 294 71.1
Gorai.009G432300 Gossypium raimondii HOM05D004279 ORTHO05D004979 1.2e-108 397.1 295 70.2
BcaC09g48518 Brassica carinata HOM05D004279 ORTHO05D004979 1.5e-108 396.7 295 72.5
Duzib213G0014 Durio zibethinus HOM05D004279 ORTHO05D004979 2.0e-108 396.4 295 70.8
FAN21G3274 Fragaria x ananassa HOM05D004279 ORTHO05D004979 2.0e-108 396.4 294 70.4
CARHR090590 Cardamine hirsuta HOM05D004279 ORTHO05D004979 2.6e-108 396.0 295 72.2
BolC1t04855H Brassica oleracea HOM05D004279 ORTHO05D004979 4.5e-108 395.2 295 72.2
Gohir.A04G027700 Gossypium hirsutum HOM05D004279 ORTHO05D004979 5.9e-108 394.8 295 69.2
Gohir.D05G360400 Gossypium hirsutum HOM05D004279 ORTHO05D004979 5.9e-108 394.8 295 69.8
Thhalv10021257m.g Eutrema salsugineum HOM05D004279 ORTHO05D004979 7.6e-108 394.4 295 71.9
PSO832G3402 Papaver somniferum HOM05D004279 ORTHO05D004979 7.6e-108 394.4 302 70.2
AT3G15530 Arabidopsis thaliana HOM05D004279 ORTHO05D004979 1.0e-107 394.0 295 71.9
Carub.0003s1526 Capsella rubella HOM05D004279 ORTHO05D004979 1.0e-107 394.0 295 71.9
A05p33880 Brassica napus HOM05D004279 ORTHO05D004979 1.3e-107 393.7 295 71.5
FAN25G2565 Fragaria x ananassa HOM05D004279 ORTHO05D004979 1.3e-107 393.7 294 70.1
Nn1g06689 Nelumbo nucifera HOM05D004279 ORTHO05D004979 1.3e-107 393.7 290 71.0
BcaB04g20920 Brassica carinata HOM05D004279 ORTHO05D004979 1.7e-107 393.3 295 71.9
BraA05t22210Z Brassica rapa HOM05D004279 ORTHO05D004979 2.2e-107 392.9 295 71.5
ECA236G3281 Erigeron canadensis HOM05D004279 ORTHO05D004979 2.9e-107 392.5 298 69.1
PSO210G3340 Papaver somniferum HOM05D004279 ORTHO05D004979 2.9e-107 392.5 302 69.9
Sp3g13790 Schrenkiella parvula HOM05D004279 ORTHO05D004979 2.9e-107 392.5 295 71.5
AL3G28110 Arabidopsis lyrata HOM05D004279 ORTHO05D004979 3.8e-107 392.1 295 71.5
Nn1g03957 Nelumbo nucifera HOM05D004279 ORTHO05D004979 5.0e-107 391.7 298 68.5
Thecc.07G074500 Theobroma cacao HOM05D004279 ORTHO05D004979 6.5e-107 391.3 295 69.8
BcaC05g28964 Brassica carinata HOM05D004279 ORTHO05D004979 8.4e-107 391.0 295 71.2
C05p51590 Brassica napus HOM05D004279 ORTHO05D004979 8.4e-107 391.0 295 71.2
BolC5t33846H Brassica oleracea HOM05D004279 ORTHO05D004979 8.4e-107 391.0 295 71.2
Potri.001G405200 Populus trichocarpa HOM05D004279 ORTHO05D004979 8.4e-107 391.0 298 70.1
Aa31LG8G2770 Aethionema arabicum HOM05D004279 ORTHO05D004979 1.4e-106 390.2 295 71.2
CiPaw.12G122100 Carya illinoinensis HOM05D004279 ORTHO05D004979 1.4e-106 390.2 299 70.9
TWI39G0076 Tripterygium wilfordii HOM05D004279 ORTHO05D004979 1.4e-106 390.2 301 68.4
Aqoxy4G01310 Aquilegia oxysepala HOM05D004279 ORTHO05D004979 1.9e-106 389.8 300 68.3
CANSAT11G2237 Cannabis sativa HOM05D004279 ORTHO05D004979 1.9e-106 389.8 301 67.8
HanXRQChr13g0386401 Helianthus annuus HOM05D004279 ORTHO05D004979 1.9e-106 389.8 298 67.8
MD11G1239200 Malus domestica HOM05D004279 ORTHO05D004979 1.9e-106 389.8 299 68.2
CSS0045555 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 3.2e-106 389.0 298 69.1
Lj3g0025503 Lotus japonicus HOM05D004279 ORTHO05D004979 4.2e-106 388.7 298 67.4
Sabra16G0266200 Salix brachista HOM05D004279 ORTHO05D004979 5.5e-106 388.3 298 69.1
BcaB06g29588 Brassica carinata HOM05D004279 ORTHO05D004979 7.2e-106 387.9 296 70.6
TWI38G1973 Tripterygium wilfordii HOM05D004279 ORTHO05D004979 7.2e-106 387.9 297 68.0
Duzib268G0928 Durio zibethinus HOM05D004279 ORTHO05D004979 9.3e-106 387.5 295 69.2
MD03G1221800 Malus domestica HOM05D004279 ORTHO05D004979 9.3e-106 387.5 290 69.7
CARHR267680 Cardamine hirsuta HOM05D004279 ORTHO05D004979 1.2e-105 387.1 296 69.6
AT5G54400 Arabidopsis thaliana HOM05D004279 ORTHO05D004979 4.6e-105 385.2 297 69.0
Ca_01814_v3 Cicer arietinum L. HOM05D004279 ORTHO05D004979 4.6e-105 385.2 296 67.6
Ca_30536_v3 Cicer arietinum L. HOM05D004279 ORTHO05D004979 4.6e-105 385.2 296 67.6
A01p38550 Brassica napus HOM05D004279 ORTHO05D004979 6.1e-105 384.8 289 72.0
BolC2t07801H Brassica oleracea HOM05D004279 ORTHO05D004979 1.0e-104 384.0 298 69.1
BraA01t03905Z Brassica rapa HOM05D004279 ORTHO05D004979 1.0e-104 384.0 289 71.6
TPR.G38955 Trifolium pratense HOM05D004279 ORTHO05D004979 1.0e-104 384.0 296 67.6
AL8G29740 Arabidopsis lyrata HOM05D004279 ORTHO05D004979 1.3e-104 383.6 297 68.7
A02p10310 Brassica napus HOM05D004279 ORTHO05D004979 1.3e-104 383.6 298 69.1
BraA02t06098Z Brassica rapa HOM05D004279 ORTHO05D004979 1.3e-104 383.6 298 69.1
QL08p019074 Quercus lobata HOM05D004279 ORTHO05D004979 1.3e-104 383.6 302 68.2
C02p17040 Brassica napus HOM05D004279 ORTHO05D004979 1.8e-104 383.3 298 69.1
Eucgr.F01088 Eucalyptus grandis HOM05D004279 ORTHO05D004979 1.8e-104 383.3 296 69.6
ClCG11G018340 Citrullus lanatus HOM05D004279 ORTHO05D004979 2.3e-104 382.9 297 69.0
DCAR_009977 Daucus carota HOM05D004279 ORTHO05D004979 2.3e-104 382.9 298 68.1
Glyma.12G220600 Glycine max HOM05D004279 ORTHO05D004979 2.3e-104 382.9 298 67.8
Sp6g16410 Schrenkiella parvula HOM05D004279 ORTHO05D004979 3.0e-104 382.5 296 69.3
MELO3C018223.2 Cucumis melo HOM05D004279 ORTHO05D004979 5.1e-104 381.7 297 68.7
CsaV3_3G044480 Cucumis sativus L. HOM05D004279 ORTHO05D004979 5.1e-104 381.7 297 68.7
C01p48920 Brassica napus HOM05D004279 ORTHO05D004979 8.7e-104 380.9 289 71.6
Ciclev10009067m.g Citrus clementina HOM05D004279 ORTHO05D004979 8.7e-104 380.9 289 68.9
BcaB05g22132 Brassica carinata HOM05D004279 ORTHO05D004979 1.5e-103 380.2 298 69.1
Sc16g0006820 Simmondsia chinensis HOM05D004279 ORTHO05D004979 1.5e-103 380.2 301 68.1
VMungo1080G0833 Vigna mungo HOM05D004279 ORTHO05D004979 1.5e-103 380.2 297 67.7
Aa31LG3G10340 Aethionema arabicum HOM05D004279 ORTHO05D004979 2.5e-103 379.4 298 68.8
Potri.011G128300 Populus trichocarpa HOM05D004279 ORTHO05D004979 3.3e-103 379.0 297 67.7
Manes.03G114800 Manihot esculenta HOM05D004279 ORTHO05D004979 4.3e-103 378.6 303 67.0
Phvul.005G085300 Phaseolus vulgaris HOM05D004279 ORTHO05D004979 5.7e-103 378.3 297 67.3
Manes.15G084500 Manihot esculenta HOM05D004279 ORTHO05D004979 9.7e-103 377.5 303 66.7
Medtr2g080130 Medicago truncatula HOM05D004279 ORTHO05D004979 1.3e-102 377.1 296 67.6
CSS0022309 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 1.6e-102 376.7 300 67.3
Psat4g016400 Pisum sativum HOM05D004279 ORTHO05D004979 1.6e-102 376.7 296 66.9
Sed0000911 Sechium edule HOM05D004279 ORTHO05D004979 2.2e-102 376.3 297 68.0
CiPaw.11G174600 Carya illinoinensis HOM05D004279 ORTHO05D004979 2.8e-102 375.9 301 67.4
Carub.0008s1473 Capsella rubella HOM05D004279 ORTHO05D004979 1.4e-101 373.6 297 67.3
Haze_09505 Corylus avellana HOM05D004279 ORTHO05D004979 1.8e-101 373.2 302 67.9
Cfa020528 Carpinus fangiana HOM05D004279 ORTHO05D004979 3.1e-101 372.5 302 67.9
BcaC03g14314 Brassica carinata HOM05D004279 ORTHO05D004979 1.2e-100 370.5 286 69.2
THA.LOC104818054 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 5.9e-100 368.2 297 67.3
TAR624G0257 Trochodendron aralioides HOM05D004279 ORTHO05D004979 1.7e-99 366.7 283 67.8
DCAR_022481 Daucus carota HOM05D004279 ORTHO05D004979 6.5e-99 364.8 297 65.3
Lalb_Chr25g0286631 Lupinus albus HOM05D004279 ORTHO05D004979 1.9e-98 363.2 300 67.7
THA.LOC104799915 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 3.2e-98 362.5 299 68.6
Lalb_Chr01g0016991 Lupinus albus HOM05D004279 ORTHO05D004979 9.4e-98 360.9 299 65.9
Sed0021920 Sechium edule HOM05D004279 ORTHO05D004979 1.4e-96 357.1 294 65.3
Lsat_1_v5_gn_7_105700 Lactuca sativa HOM05D004279 ORTHO05D004979 8.8e-96 354.4 302 64.6
MBI02_g29384_MAGBIO Magnolia biondii HOM05D004279 ORTHO05D004979 8.8e-96 354.4 293 64.2
Ah.06g183670 Amaranthus hybridus HOM05D004279 ORTHO05D004979 2.5e-95 352.8 313 63.6
Phvul.011G148200 Phaseolus vulgaris HOM05D004279 ORTHO05D004979 4.8e-94 348.6 299 62.9
Glyma.06G249400 Glycine max HOM05D004279 ORTHO05D004979 1.8e-93 346.7 301 63.1
Glyma.12G148500 Glycine max HOM05D004279 ORTHO05D004979 5.3e-93 345.1 299 62.9
AUR62015623 Chenopodium quinoa HOM05D004279 ORTHO05D004979 1.2e-92 344.0 312 62.2
AUR62029338 Chenopodium quinoa HOM05D004279 ORTHO05D004979 2.0e-92 343.2 312 62.5
EL10Ac4g08091 Beta vulgaris HOM05D004279 ORTHO05D004979 7.7e-92 341.3 310 61.3
SHI28037 Sapria himalayana HOM05D004279 ORTHO05D004979 7.7e-92 341.3 288 64.2
VMungo1127G1925 Vigna mungo HOM05D004279 ORTHO05D004979 1.9e-90 336.7 300 60.7
HPP92_016704 Vanilla planifolia HOM05D004279 ORTHO05D004979 3.0e-88 329.3 300 62.0
ECA246G0789 Erigeron canadensis HOM05D004279 ORTHO05D004979 1.7e-86 323.6 252 67.9
SHI18877 Sapria himalayana HOM05D004279 ORTHO05D004979 5.5e-82 308.5 266 63.2
Glyma.13G280900 Glycine max HOM05D004279 ORTHO05D004979 3.0e-80 302.8 298 57.7
SHI27994 Sapria himalayana HOM05D004279 ORTHO05D004979 1.8e-72 276.9 285 54.7
GSVIVG01014410001 Vitis vinifera HOM05D004279 ORTHO05D004979 5.9e-68 261.9 199 70.9
Thhalv10014468m.g Eutrema salsugineum HOM05D004279 ORTHO05D004979 2.9e-67 259.6 220 65.5
ATR0693G409 Amborella trichopoda HOM05D004279 ORTHO05D004979 4.4e-63 245.7 283 53.7
SHI27902 Sapria himalayana HOM05D004279 ORTHO05D004979 1.3e-62 244.2 284 50.4
SHI27891 Sapria himalayana HOM05D004279 ORTHO05D004979 1.7e-62 243.8 290 49.0
Mapoly0019s0089 Marchantia polymorpha HOM05D004279 ORTHO05D004979 6.8e-56 221.9 283 46.6
CAN.G162.92 Capsicum annuum HOM05D004279 ORTHO05D004979 9.8e-55 218.0 143 74.1
SHI28023 Sapria himalayana HOM05D004279 ORTHO05D004979 1.8e-53 213.8 271 48.3
Atru.chr2.2812 Acer truncatum HOM05D004279 ORTHO05D004979 2.7e-52 209.9 143 72.7
HanXRQChr08g0235651 Helianthus annuus HOM05D004279 ORTHO05D004979 1.2e-49 201.1 171 63.2
HanXRQChr08g0235661 Helianthus annuus HOM05D004279 ORTHO05D004979 6.4e-46 188.7 132 68.9
VMungo1127G2040 Vigna mungo HOM05D004279 ORTHO05D004979 4.7e-41 172.6 157 59.9
Atru.chr2.2813 Acer truncatum HOM05D004279 ORTHO05D004979 4.3e-26 122.9 100 59.0
Haze_01531 Corylus avellana HOM05D004279 ORTHO05D004979 4.0e-24 116.3 113 60.2
Haze_12044 Corylus avellana HOM05D004279 ORTHO05D004979 1.1e-21 108.2 113 57.5
QL06p019554 Quercus lobata HOM05D004279 ORTHO05D004979 4.2e-21 106.3 88 68.2
CBR_g24389 Chara braunii HOM05D004279 ORTHO05D004979 4.6e-20 102.8 119 45.4
Haze_10444 Corylus avellana HOM05D004279 ORTHO05D004979 2.3e-19 100.5 99 61.6
SHI28022 Sapria himalayana HOM05D004279 ORTHO05D004979 1.4e-13 81.3 71 54.9
Haze_13283 Corylus avellana HOM05D004279 ORTHO05D004979 1.9e-10 70.9 84 54.8
Haze_06332 Corylus avellana HOM05D004279 ORTHO05D004979 2.8e-09 67.0 72 54.2


User provided reference genes

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