Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold9G04946 Striga asiatica HOM05D000010 ORTHO05D000151 1.0e-72 276.6 133 100.0
Migut.M00863 Erythranthe guttata HOM05D000010 ORTHO05D000151 5.0e-19 98.2 162 40.7
Oeu060541.1 Olea europaea HOM05D000010 ORTHO05D000151 9.5e-18 94.0 160 40.0
vmacro11825 Vaccinium macrocarpon HOM05D000010 ORTHO05D000151 2.1e-17 92.8 166 37.3
MSTRG.12921 Avicennia marina HOM05D000010 ORTHO05D000151 2.8e-17 92.4 151 41.1
Lj1A850G59 Lonicera japonica HOM05D000010 ORTHO05D000151 2.3e-16 89.4 135 43.7
MSTRG.15214 Avicennia marina HOM05D000010 ORTHO05D000151 4.0e-16 88.6 162 42.6
Peaxi162Scf00998g00126 Petunia axillaris HOM05D000010 ORTHO05D000151 4.0e-16 88.6 177 35.0
SalBow7G3918 Salvia bowleyana HOM05D000010 ORTHO05D000151 5.2e-16 88.2 139 43.9
Nitab4.5_0000815g0080 Nicotiana tabacum HOM05D000010 ORTHO05D000151 6.8e-16 87.8 112 44.6
CSS0041387 Camellia sinensis var. sinensis HOM05D000010 ORTHO05D000151 8.9e-16 87.4 174 36.2
Cc05_g12500 Coffea canephora HOM05D000010 ORTHO05D000151 1.2e-15 87.0 180 34.4
Oeu019354.1 Olea europaea HOM05D000010 ORTHO05D000151 1.2e-15 87.0 162 37.7
CSS0044064 Camellia sinensis var. sinensis HOM05D000010 ORTHO05D000151 3.4e-15 85.5 174 36.2
Hma1.2p1_1154F.1_g262210 Hydrangea macrophylla HOM05D000010 ORTHO05D000151 3.4e-15 85.5 155 40.0
Nitab4.5_0001204g0100 Nicotiana tabacum HOM05D000010 ORTHO05D000151 3.4e-15 85.5 95 52.6
Atru.chr2.2764 Acer truncatum HOM05D000010 ORTHO05D000151 5.7e-15 84.7 159 37.7
Migut.H01915 Erythranthe guttata HOM05D000010 ORTHO05D000151 9.8e-15 84.0 142 40.8
PGSC0003DMG400019294 Solanum tuberosum HOM05D000010 ORTHO05D000151 3.7e-14 82.0 116 40.5
SGA_v2.0_scaffold73G24301 Striga asiatica HOM05D000010 ORTHO05D000151 3.7e-14 82.0 133 42.1
DCAR_009973 Daucus carota HOM05D000010 ORTHO05D000151 6.3e-14 81.3 148 39.2
Solyc07g063410.3 Solanum lycopersicum HOM05D000010 ORTHO05D000151 8.3e-14 80.9 116 40.5
Actinidia09980 Actinidia chinensis HOM05D000010 ORTHO05D000151 1.4e-13 80.1 156 39.1
Sopen07g031570 Solanum pennellii HOM05D000010 ORTHO05D000151 1.4e-13 80.1 116 39.7
Hma1.2p1_1124F.1_g259533 Hydrangea macrophylla HOM05D000010 ORTHO05D000151 1.8e-13 79.7 152 40.1
Hma1.2p1_1124F.1_g259536 Hydrangea macrophylla HOM05D000010 ORTHO05D000151 1.8e-13 79.7 152 40.1
Hma1.2p1_1274F.1_g271960 Hydrangea macrophylla HOM05D000010 ORTHO05D000151 1.8e-13 79.7 152 40.1
Hma1.2p1_1274F.1_g271965 Hydrangea macrophylla HOM05D000010 ORTHO05D000151 1.8e-13 79.7 152 40.1
Lj8A159T98 Lonicera japonica HOM05D000010 ORTHO05D000151 3.2e-13 79.0 152 38.2
QL08p019315 Quercus lobata HOM05D000010 ORTHO05D000151 1.2e-12 77.0 157 38.9
Haze_09492 Corylus avellana HOM05D000010 ORTHO05D000151 1.6e-12 76.6 159 35.8
GSVIVG01014403001 Vitis vinifera HOM05D000010 ORTHO05D000151 4.5e-12 75.1 155 38.1
Dinv08322 Davidia involucrata HOM05D000010 ORTHO05D000151 5.9e-12 74.7 178 35.4
HanXRQChr11g0327541 Helianthus annuus HOM05D000010 ORTHO05D000151 5.9e-12 74.7 154 33.8
Rhsim06G0195200 Rhododendron simsii HOM05D000010 ORTHO05D000151 5.9e-12 74.7 155 35.5
TWI39G0183 Tripterygium wilfordii HOM05D000010 ORTHO05D000151 5.9e-12 74.7 164 35.4
TWI38G0442 Tripterygium wilfordii HOM05D000010 ORTHO05D000151 7.8e-12 74.3 166 36.7
Nitab4.5_0001610g0040 Nicotiana tabacum HOM05D000010 ORTHO05D000151 1.7e-11 73.2 80 47.5
COL.COLO4_09448 Corchorus olitorius HOM05D000010 ORTHO05D000151 2.3e-11 72.8 148 35.1
Dinv22377 Davidia involucrata HOM05D000010 ORTHO05D000151 2.9e-11 72.4 169 34.9
CSS0042055 Camellia sinensis var. sinensis HOM05D000010 ORTHO05D000151 3.9e-11 72.0 155 36.8
Gohir.D05G359800 Gossypium hirsutum HOM05D000010 ORTHO05D000151 3.9e-11 72.0 165 35.2
Gohir.A04G031200 Gossypium hirsutum HOM05D000010 ORTHO05D000151 6.6e-11 71.2 164 33.5
Nitab4.5_0000662g0120 Nicotiana tabacum HOM05D000010 ORTHO05D000151 6.6e-11 71.2 99 40.4
CSS0013510 Camellia sinensis var. sinensis HOM05D000010 ORTHO05D000151 8.6e-11 70.9 153 35.3
RcHm_v2.0_Chr5g0034761 Rosa chinensis HOM05D000010 ORTHO05D000151 8.6e-11 70.9 92 45.7
AL7G25380 Arabidopsis lyrata HOM05D000010 ORTHO05D000151 1.1e-10 70.5 108 41.7
Duzib213G0589 Durio zibethinus HOM05D000010 ORTHO05D000151 1.5e-10 70.1 168 32.1
CiPaw.12G121600 Carya illinoinensis HOM05D000010 ORTHO05D000151 2.5e-10 69.3 164 32.3
Ciclev10008812m.g Citrus clementina HOM05D000010 ORTHO05D000151 2.5e-10 69.3 68 51.5
Potri.011G123300 Populus trichocarpa HOM05D000010 ORTHO05D000151 2.5e-10 69.3 171 36.3
Sabra11G0108900 Salix brachista HOM05D000010 ORTHO05D000151 2.5e-10 69.3 172 33.1
Sopen12g006970 Solanum pennellii HOM05D000010 ORTHO05D000151 2.5e-10 69.3 73 49.3
Lsat_1_v5_gn_7_105640 Lactuca sativa HOM05D000010 ORTHO05D000151 3.3e-10 68.9 164 29.3
PGSC0003DMG400015342 Solanum tuberosum HOM05D000010 ORTHO05D000151 3.3e-10 68.9 84 42.9
FAN16G2331 Fragaria x ananassa HOM05D000010 ORTHO05D000151 4.3e-10 68.6 90 45.6
FAN16G2821 Fragaria x ananassa HOM05D000010 ORTHO05D000151 4.3e-10 68.6 90 45.6
Solyc12g013620.2 Solanum lycopersicum HOM05D000010 ORTHO05D000151 4.3e-10 68.6 73 49.3
Peaxi162Scf00000g00481 Petunia axillaris HOM05D000010 ORTHO05D000151 7.3e-10 67.8 94 40.4
FAN25G1643 Fragaria x ananassa HOM05D000010 ORTHO05D000151 9.5e-10 67.4 90 44.4
Prupe.4G186800 Prunus persica HOM05D000010 ORTHO05D000151 9.5e-10 67.4 85 45.9
AT4G27410 Arabidopsis thaliana HOM05D000010 ORTHO05D000151 1.2e-09 67.0 108 38.9
CiPaw.11G174100 Carya illinoinensis HOM05D000010 ORTHO05D000151 1.2e-09 67.0 163 32.5
FvH4_3g20690 Fragaria vesca HOM05D000010 ORTHO05D000151 1.2e-09 67.0 90 44.4
FAN11G1939 Fragaria x ananassa HOM05D000010 ORTHO05D000151 1.2e-09 67.0 90 44.4
C01p23520 Brassica napus HOM05D000010 ORTHO05D000151 1.6e-09 66.6 113 38.9
BcaNung07201 Brassica carinata HOM05D000010 ORTHO05D000151 2.8e-09 65.9 114 36.8
BolC1t02297H Brassica oleracea HOM05D000010 ORTHO05D000151 2.8e-09 65.9 114 36.8
Cpa.g.sc80.93 Carica papaya HOM05D000010 ORTHO05D000151 2.8e-09 65.9 165 32.7
Potri.001G404100 Populus trichocarpa HOM05D000010 ORTHO05D000151 2.8e-09 65.9 172 34.3
Thecc.07G075800 Theobroma cacao HOM05D000010 ORTHO05D000151 2.8e-09 65.9 151 33.8
Gorai.009G433200 Gossypium raimondii HOM05D000010 ORTHO05D000151 3.6e-09 65.5 85 47.1
FAN21G0617 Fragaria x ananassa HOM05D000010 ORTHO05D000151 4.7e-09 65.1 90 43.3
Ah.06g183790 Amaranthus hybridus HOM05D000010 ORTHO05D000151 6.1e-09 64.7 157 35.0
Manes.03G114200 Manihot esculenta HOM05D000010 ORTHO05D000151 6.1e-09 64.7 171 32.2
Ah.04g165070 Amaranthus hybridus HOM05D000010 ORTHO05D000151 8.0e-09 64.3 172 34.9
AUR62015630 Chenopodium quinoa HOM05D000010 ORTHO05D000151 8.0e-09 64.3 80 50.0
Nn1g06666 Nelumbo nucifera HOM05D000010 ORTHO05D000151 8.0e-09 64.3 73 46.6
A01p18570 Brassica napus HOM05D000010 ORTHO05D000151 1.4e-08 63.5 114 36.0
MSTRG.6844 Avicennia marina HOM05D000010 ORTHO05D000151 1.8e-08 63.2 153 32.7
CAN.G213.1 Capsicum annuum HOM05D000010 ORTHO05D000151 1.8e-08 63.2 78 44.9
Duzib170G0973 Durio zibethinus HOM05D000010 ORTHO05D000151 1.8e-08 63.2 150 33.3
Sabra16G0265700 Salix brachista HOM05D000010 ORTHO05D000151 2.3e-08 62.8 151 32.5
ECA236G1527 Erigeron canadensis HOM05D000010 ORTHO05D000151 3.1e-08 62.4 160 29.4
Manes.15G084800 Manihot esculenta HOM05D000010 ORTHO05D000151 3.1e-08 62.4 173 31.2
Nn1g03987 Nelumbo nucifera HOM05D000010 ORTHO05D000151 4.0e-08 62.0 80 42.5
Aa31LG3G10380 Aethionema arabicum HOM05D000010 ORTHO05D000151 6.8e-08 61.2 61 45.9
Ca_01820_v3 Cicer arietinum L. HOM05D000010 ORTHO05D000151 1.2e-07 60.5 156 31.4
Gohir.A01G066700 Gossypium hirsutum HOM05D000010 ORTHO05D000151 1.2e-07 60.5 62 45.2
BcaNung03031 Brassica carinata HOM05D000010 ORTHO05D000151 1.5e-07 60.1 109 35.8
MD03G1222700 Malus domestica HOM05D000010 ORTHO05D000151 1.5e-07 60.1 58 51.7
EL10Ac4g08102 Beta vulgaris HOM05D000010 ORTHO05D000151 2.0e-07 59.7 180 30.6
Hund02197 Selenicereus undatus HOM05D000010 ORTHO05D000151 2.6e-07 59.3 170 34.1
CANSAT56G3619 Cannabis sativa HOM05D000010 ORTHO05D000151 3.4e-07 58.9 159 30.8
PSO541G3222 Papaver somniferum HOM05D000010 ORTHO05D000151 3.4e-07 58.9 158 31.0
Sp7g25350 Schrenkiella parvula HOM05D000010 ORTHO05D000151 3.4e-07 58.9 113 36.3
CARHR235080 Cardamine hirsuta HOM05D000010 ORTHO05D000151 4.4e-07 58.5 114 36.8
Gohir.1Z049571 Gossypium hirsutum HOM05D000010 ORTHO05D000151 4.4e-07 58.5 153 29.4
Gohir.D01G053900 Gossypium hirsutum HOM05D000010 ORTHO05D000151 4.4e-07 58.5 153 29.4
Gorai.002G073700 Gossypium raimondii HOM05D000010 ORTHO05D000151 7.5e-07 57.8 153 29.4
CsaV3_3G044540 Cucumis sativus L. HOM05D000010 ORTHO05D000151 9.8e-07 57.4 61 52.5
TAR626G0516 Trochodendron aralioides HOM05D000010 ORTHO05D000151 1.3e-06 57.0 68 45.6
THA.LOC104799916 Tarenaya hassleriana HOM05D000010 ORTHO05D000151 1.7e-06 56.6 88 39.8
Cfa019487 Carpinus fangiana HOM05D000061 ORTHO05D000050 3.7e-06 55.5 80 42.5
PSO675G1975 Papaver somniferum HOM05D000010 ORTHO05D000151 3.7e-06 55.5 155 31.0
ClCG11G018280 Citrullus lanatus HOM05D000010 ORTHO05D000151 4.9e-06 55.1 116 32.8
MELO3C018242.2 Cucumis melo HOM05D000010 ORTHO05D000151 4.9e-06 55.1 61 50.8
MBI02_g19257_MAGBIO Magnolia biondii HOM05D000010 ORTHO05D000151 8.3e-06 54.3 65 43.1


User provided reference genes

Program Settings