Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold9G04924 Striga asiatica HOM05D000300 ORTHO05D399219 1.2e-135 486.9 308 100.0
Migut.H01930 Erythranthe guttata HOM05D000300 ORTHO05D000383 1.1e-13 81.6 312 28.5
Oeu005417.1 Olea europaea HOM05D000300 ORTHO05D000383 5.8e-10 69.3 303 27.4
Cc05_g12170 Coffea canephora HOM05D000300 ORTHO05D000383 7.1e-08 62.4 120 32.5
CSS0011290 Camellia sinensis var. sinensis HOM05D000300 ORTHO05D000383 2.7e-07 60.5 39 66.7
CSS0029904 Camellia sinensis var. sinensis HOM05D000300 ORTHO05D000383 2.7e-07 60.5 39 66.7
Duzib268G1868 Durio zibethinus HOM05D000300 ORTHO05D000383 6.0e-07 59.3 124 31.5
Dinv20166 Davidia involucrata HOM05D000300 ORTHO05D000383 7.8e-07 58.9 39 66.7
vmacro09537 Vaccinium macrocarpon HOM05D000300 ORTHO05D000383 7.8e-07 58.9 37 67.6
Cfa019351 Carpinus fangiana HOM05D000300 ORTHO05D000383 1.0e-06 58.5 39 61.5
Haze_07742 Corylus avellana HOM05D000300 ORTHO05D000383 1.0e-06 58.5 39 61.5
Dinv08304 Davidia involucrata HOM05D000300 ORTHO05D000383 1.0e-06 58.5 37 67.6
CANSAT56G1820 Cannabis sativa HOM05D000300 ORTHO05D000383 1.3e-06 58.2 39 61.5
Gohir.A10G025300 Gossypium hirsutum HOM05D000300 ORTHO05D000383 1.7e-06 57.8 57 49.1
Gohir.D01G051800 Gossypium hirsutum HOM05D000300 ORTHO05D000383 1.7e-06 57.8 124 31.5
Gohir.D10G026000 Gossypium hirsutum HOM05D000300 ORTHO05D000383 1.7e-06 57.8 57 49.1
Gorai.011G027300 Gossypium raimondii HOM05D000300 ORTHO05D000383 1.7e-06 57.8 57 49.1
Actinidia35252 Actinidia chinensis HOM05D000300 ORTHO05D000383 2.3e-06 57.4 35 65.7
DCAR_020984 Daucus carota HOM05D000300 ORTHO05D000383 2.3e-06 57.4 173 27.7
arahy.Tifrunner.gnm1.ann1.FZZ2BS Arachis hypogaea HOM05D000300 ORTHO05D000383 3.0e-06 57.0 39 66.7
ClCG10G006880 Citrullus lanatus HOM05D000300 ORTHO05D000383 3.0e-06 57.0 39 64.1
Actinidia18764 Actinidia chinensis HOM05D000300 ORTHO05D000383 3.9e-06 56.6 35 62.9
CAN.G162.67 Capsicum annuum HOM05D000300 ORTHO05D000383 3.9e-06 56.6 39 64.1
Gorai.002G071700 Gossypium raimondii HOM05D000300 ORTHO05D000383 3.9e-06 56.6 124 30.6
Cfa000434 Carpinus fangiana HOM05D000300 ORTHO05D000383 5.1e-06 56.2 39 64.1
Haze_06481 Corylus avellana HOM05D000300 ORTHO05D000383 5.1e-06 56.2 39 64.1
Gohir.A01G064700 Gossypium hirsutum HOM05D000300 ORTHO05D000383 5.1e-06 56.2 124 60.5
Nitab4.5_0003688g0110 Nicotiana tabacum HOM05D000300 ORTHO05D000383 5.1e-06 56.2 39 64.1
Peaxi162Scf00069g01338 Petunia axillaris HOM05D000300 ORTHO05D000383 5.1e-06 56.2 39 64.1
MELO3C016518.2 Cucumis melo HOM05D000300 ORTHO05D000383 6.6e-06 55.8 37 64.9
CsaV3_3G006240 Cucumis sativus L. HOM05D000300 ORTHO05D000383 6.6e-06 55.8 39 64.1
Duzib192G0853 Durio zibethinus HOM05D000300 ORTHO05D000383 6.6e-06 55.8 39 64.1
Manes.03G111800 Manihot esculenta HOM05D000300 ORTHO05D000383 6.6e-06 55.8 174 29.3
Ca_00328_v3 Cicer arietinum L. HOM05D000300 ORTHO05D000383 8.6e-06 55.5 39 61.5
Lalb_Chr15g0089841 Lupinus albus HOM05D000300 ORTHO05D000383 8.6e-06 55.5 39 61.5
TAR627G1084 Trochodendron aralioides HOM05D000300 ORTHO05D000383 8.6e-06 55.5 39 61.5


User provided reference genes

Program Settings