Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold9G04837 Striga asiatica HOM05D006510 ORTHO05D008171 0.0e+00 1453.0 741 100.0
Migut.M00272 Erythranthe guttata HOM05D006510 ORTHO05D008171 0.0e+00 1083.6 856 67.9
PGSC0003DMG400015368 Solanum tuberosum HOM05D006510 ORTHO05D008171 3.6e-276 954.9 859 60.4
CAN.G1716.4 Capsicum annuum HOM05D006510 ORTHO05D008171 8.1e-276 953.7 859 61.0
Sopen12g005700 Solanum pennellii HOM05D006510 ORTHO05D008171 8.9e-275 950.3 859 59.6
Solyc12g013950.2 Solanum lycopersicum HOM05D006510 ORTHO05D008171 6.4e-273 944.1 859 59.7
GSVIVG01020726001 Vitis vinifera HOM05D006510 ORTHO05D008171 1.6e-271 939.5 819 61.3
Nitab4.5_0002027g0190 Nicotiana tabacum HOM05D006510 ORTHO05D008171 4.6e-271 937.9 848 60.3
CSS0034147 Camellia sinensis var. sinensis HOM05D006510 ORTHO05D008171 7.8e-271 937.2 869 59.4
CSS0039339 Camellia sinensis var. sinensis HOM05D006510 ORTHO05D008171 1.0e-270 936.8 869 59.3
Hma1.2p1_0178F.1_g078710 Hydrangea macrophylla HOM05D006510 ORTHO05D008171 8.6e-270 933.7 865 59.2
Rhsim04G0074900 Rhododendron simsii HOM05D006510 ORTHO05D008171 1.2e-268 929.9 869 58.3
Cc05_g08450 Coffea canephora HOM05D006510 ORTHO05D008171 8.9e-267 923.7 854 59.4
Peaxi162Scf00229g01116 Petunia axillaris HOM05D006510 ORTHO05D008171 1.2e-266 923.3 844 59.8
COL.COLO4_33599 Corchorus olitorius HOM05D006510 ORTHO05D008171 5.8e-266 921.0 868 57.4
QL08p042146 Quercus lobata HOM05D006510 ORTHO05D008171 1.1e-264 916.8 867 56.9
Thecc.01G152700 Theobroma cacao HOM05D006510 ORTHO05D008171 8.7e-262 907.1 868 56.8
Lj8C100T15 Lonicera japonica HOM05D006510 ORTHO05D008171 1.1e-261 906.7 882 56.8
DCAR_013276 Daucus carota HOM05D006510 ORTHO05D008171 4.0e-259 898.3 864 57.4
Ciclev10014241m.g Citrus clementina HOM05D006510 ORTHO05D008171 7.6e-258 894.0 869 55.4
Duzib147G0397 Durio zibethinus HOM05D006510 ORTHO05D008171 7.6e-258 894.0 868 56.9
Actinidia03942 Actinidia chinensis HOM05D006510 ORTHO05D008171 2.2e-257 892.5 826 58.4
Glyma.06G276100 Glycine max HOM05D006510 ORTHO05D008171 3.8e-257 891.7 863 57.1
Nitab4.5_0006142g0020 Nicotiana tabacum HOM05D006510 ORTHO05D008171 1.9e-256 889.4 848 58.1
Potri.014G142900 Populus trichocarpa HOM05D006510 ORTHO05D008171 3.2e-256 888.6 864 56.1
Lj3g0027149 Lotus japonicus HOM05D006510 ORTHO05D008171 2.7e-255 885.6 867 55.8
Oeu001793.2 Olea europaea HOM05D006510 ORTHO05D008171 2.7e-255 885.6 799 60.2
TWI38G0436 Tripterygium wilfordii HOM05D006510 ORTHO05D008171 6.0e-255 884.4 868 56.0
Cfa021921 Carpinus fangiana HOM05D006510 ORTHO05D008171 7.9e-255 884.0 867 55.7
Glyma.12G129300 Glycine max HOM05D006510 ORTHO05D008171 1.3e-254 883.2 862 56.7
Prupe.3G115700 Prunus persica HOM05D006510 ORTHO05D008171 4.3e-253 878.2 871 55.9
CiPaw.03G194300 Carya illinoinensis HOM05D006510 ORTHO05D008171 1.3e-252 876.7 871 54.9
unitig_46.g18272 Utricularia gibba HOM05D006510 ORTHO05D008171 1.3e-252 876.7 861 54.9
arahy.Tifrunner.gnm1.ann1.J1H900 Arachis hypogaea HOM05D006510 ORTHO05D008171 4.0e-251 871.7 861 55.1
Lalb_Chr24g0400131 Lupinus albus HOM05D006510 ORTHO05D008171 6.9e-251 870.9 867 54.4
CANSAT78G1126 Cannabis sativa HOM05D006510 ORTHO05D008171 1.2e-250 870.2 872 54.5
Gorai.006G003700 Gossypium raimondii HOM05D006510 ORTHO05D008171 9.9e-250 867.1 865 54.9
Gohir.A09G003200 Gossypium hirsutum HOM05D006510 ORTHO05D008171 8.4e-249 864.0 865 54.7
MD11G1004500 Malus domestica HOM05D006510 ORTHO05D008171 1.4e-248 863.2 871 55.6
Manes.07G057100 Manihot esculenta HOM05D006510 ORTHO05D008171 1.4e-248 863.2 866 54.5
arahy.Tifrunner.gnm1.ann1.JGR80D Arachis hypogaea HOM05D006510 ORTHO05D008171 2.4e-248 862.4 861 54.4
Phvul.011G128400 Phaseolus vulgaris HOM05D006510 ORTHO05D008171 4.2e-248 861.7 862 55.3
RcHm_v2.0_Chr2g0130091 Rosa chinensis HOM05D006510 ORTHO05D008171 2.1e-247 859.4 870 54.3
TAR636G1540 Trochodendron aralioides HOM05D006510 ORTHO05D008171 2.7e-247 859.0 876 54.7
Psat7g163800 Pisum sativum HOM05D006510 ORTHO05D008171 3.5e-247 858.6 864 55.1
Ca_18866_v3 Cicer arietinum L. HOM05D006510 ORTHO05D008171 1.0e-246 857.1 865 54.2
CsaV3_1G037360 Cucumis sativus L. HOM05D006510 ORTHO05D008171 2.3e-246 855.9 863 54.3
TPR.G16532 Trifolium pratense HOM05D006510 ORTHO05D008171 2.3e-246 855.9 860 54.5
TPR.G13821 Trifolium pratense HOM05D006510 ORTHO05D008171 1.9e-245 852.8 865 54.2
MELO3C002806.2 Cucumis melo HOM05D006510 ORTHO05D008171 2.5e-245 852.4 863 54.0
PGR142G2695 Punica granatum HOM05D006510 ORTHO05D008171 9.6e-245 850.5 867 54.2
Haze_13408 Corylus avellana HOM05D006510 ORTHO05D008171 3.7e-244 848.6 827 56.0
Eucgr.K01140 Eucalyptus grandis HOM05D006510 ORTHO05D008171 4.8e-244 848.2 868 54.0
ClCG07G002720 Citrullus lanatus HOM05D006510 ORTHO05D008171 5.8e-242 841.3 870 53.4
THA.LOC104823853 Tarenaya hassleriana HOM05D006510 ORTHO05D008171 5.8e-242 841.3 873 52.9
FvH4_6g27600 Fragaria vesca HOM05D006510 ORTHO05D008171 1.7e-241 839.7 870 53.3
FAN02G4134 Fragaria x ananassa HOM05D006510 ORTHO05D008171 4.9e-241 838.2 870 53.3
Atru.chr6.2773 Acer truncatum HOM05D006510 ORTHO05D008171 1.1e-240 837.0 867 54.1
FAN14G1437 Fragaria x ananassa HOM05D006510 ORTHO05D008171 1.4e-240 836.6 870 53.1
FAN05G5099 Fragaria x ananassa HOM05D006510 ORTHO05D008171 1.9e-240 836.3 870 53.2
Nn8g40464 Nelumbo nucifera HOM05D006510 ORTHO05D008171 2.5e-240 835.9 873 53.6
Sabra14G0108000 Salix brachista HOM05D006510 ORTHO05D008171 3.5e-239 832.0 851 55.3
Thhalv10016247m.g Eutrema salsugineum HOM05D006510 ORTHO05D008171 5.3e-235 818.1 875 52.5
CARHR137800 Cardamine hirsuta HOM05D006510 ORTHO05D008171 6.9e-235 817.8 877 52.5
AT2G42700 Arabidopsis thaliana HOM05D006510 ORTHO05D008171 5.8e-234 814.7 876 51.9
Sp4g24850 Schrenkiella parvula HOM05D006510 ORTHO05D008171 5.8e-234 814.7 874 52.1
Carub.0004s2514 Capsella rubella HOM05D006510 ORTHO05D008171 5.0e-233 811.6 874 51.7
A05p03350 Brassica napus HOM05D006510 ORTHO05D008171 5.5e-232 808.1 873 51.9
Medtr4g080110 Medicago truncatula HOM05D006510 ORTHO05D008171 5.5e-232 808.1 865 51.9
ECA248G1772 Erigeron canadensis HOM05D006510 ORTHO05D008171 9.3e-232 807.4 863 51.8
Gohir.D09G003000 Gossypium hirsutum HOM05D006510 ORTHO05D008171 2.1e-231 806.2 865 52.1
BraA05t19323Z Brassica rapa HOM05D006510 ORTHO05D008171 6.1e-231 804.7 875 51.7
Sed0011358 Sechium edule HOM05D006510 ORTHO05D008171 1.0e-230 803.9 868 51.5
C04p03920 Brassica napus HOM05D006510 ORTHO05D008171 1.1e-229 800.4 875 51.5
AL4G41260 Arabidopsis lyrata HOM05D006510 ORTHO05D008171 1.9e-229 799.7 876 51.3
Lsat_1_v5_gn_4_64481 Lactuca sativa HOM05D006510 ORTHO05D008171 4.8e-228 795.0 856 51.6
Aqoxy5G02856 Aquilegia oxysepala HOM05D006510 ORTHO05D008171 8.2e-228 794.3 878 50.2
Aa31LG1G24480 Aethionema arabicum HOM05D006510 ORTHO05D008171 1.4e-227 793.5 916 48.8
MBI16_g39629_MAGBIO Magnolia biondii HOM05D006510 ORTHO05D008171 1.5e-226 790.0 871 50.6
PSO478G4451 Papaver somniferum HOM05D006510 ORTHO05D008171 3.6e-223 778.9 869 50.6
PSO782G3259 Papaver somniferum HOM05D006510 ORTHO05D008171 1.4e-222 776.9 870 50.9
Hma1.2p1_0178F.1_g078700 Hydrangea macrophylla HOM05D006510 ORTHO05D008171 5.9e-218 761.5 807 54.2
AUR62029599 Chenopodium quinoa HOM05D006510 ORTHO05D008171 1.7e-217 760.0 807 52.7
EL10Ac9g20963 Beta vulgaris HOM05D006510 ORTHO05D008171 2.7e-215 752.7 855 50.6
BolC4t22028H Brassica oleracea HOM05D006510 ORTHO05D008171 8.8e-214 747.7 833 51.1
AUR62041733 Chenopodium quinoa HOM05D006510 ORTHO05D008171 4.4e-213 745.3 849 50.3
Sc12g0003550 Simmondsia chinensis HOM05D006510 ORTHO05D008171 4.8e-212 741.9 801 51.8
ATR0796G261 Amborella trichopoda HOM05D006510 ORTHO05D008171 1.0e-206 724.2 848 48.9
VMungo1127G1883 Vigna mungo HOM05D006510 ORTHO05D008171 1.1e-200 704.1 752 53.1
Os11g0169100 Oryza sativa ssp. japonica HOM05D006510 ORTHO05D008171 9.4e-200 701.0 872 46.7
Ah.01g004980 Amaranthus hybridus HOM05D006510 ORTHO05D008171 2.3e-198 696.4 825 49.0
CDE04G2642 Ceratophyllum demersum HOM05D006510 ORTHO05D008171 4.2e-192 675.6 864 44.6
FAN09G2536 Fragaria x ananassa HOM05D006510 ORTHO05D008171 1.7e-188 663.7 755 50.2
arahy.Tifrunner.gnm1.ann1.H5IL2E Arachis hypogaea HOM05D006510 ORTHO05D008171 3.5e-186 656.0 609 57.6
HPP92_014652 Vanilla planifolia HOM05D006510 ORTHO05D008171 6.8e-182 641.7 846 45.6
Dinv07684 Davidia involucrata HOM05D006510 ORTHO05D008171 2.0e-173 613.6 652 54.8
vmacro09212 Vaccinium macrocarpon HOM05D006510 ORTHO05D008171 8.9e-166 588.2 825 44.5
Zm00001eb297610 Zea mays HOM05D006510 ORTHO05D008171 7.3e-152 542.0 754 43.0
SalBow7G4578 Salvia bowleyana HOM05D006510 ORTHO05D008171 1.1e-126 458.4 437 59.0
SEGI_27047 Sequoiadendron giganteum HOM05D006510 ORTHO05D008171 3.5e-122 443.4 735 40.0
TAR629G2876 Trochodendron aralioides HOM05D006510 ORTHO05D008171 6.1e-114 416.0 523 48.2
Pp3c9_21860 Physcomitrium patens HOM05D006510 ORTHO05D008171 1.1e-112 411.8 867 32.8
Mapoly0047s0091 Marchantia polymorpha HOM05D006510 ORTHO05D008171 8.8e-105 385.6 841 32.3
SMO164G0050 Selaginella moellendorffii HOM05D006510 ORTHO05D008171 1.7e-100 371.3 831 33.9
Cpa.g.sc52.162 Carica papaya HOM05D006510 ORTHO05D008171 8.5e-92 342.4 315 59.4
CBR_g35046 Chara braunii HOM05D006510 ORTHO05D008171 1.3e-68 265.4 988 25.7
Dinv07685 Davidia involucrata HOM05D006510 ORTHO05D008171 1.3e-26 125.9 97 67.0
TAR629G0105 Trochodendron aralioides HOM05D006510 ORTHO05D008171 1.6e-26 125.6 114 58.8
Cre11.g479200 Chlamydomonas reinhardtii HOM05D006510 ORTHO05D008171 1.3e-18 99.4 570 21.9
unitig_46.g18270 Utricularia gibba HOM05D006510 ORTHO05D008171 1.4e-17 95.9 65 67.7
VMungo1127G1894 Vigna mungo HOM05D006510 ORTHO05D008171 1.8e-17 95.5 65 70.8
Cpa.g.sc52.161 Carica papaya HOM05D006510 ORTHO05D008171 2.9e-15 88.2 49 83.7
Cpa.g.c45723 Carica papaya HOM05D006510 ORTHO05D008171 2.4e-14 85.1 63 61.9
Solyc01g011180.1 Solanum lycopersicum HOM05D006510 ORTHO05D008171 6.0e-13 80.5 57 66.7
Solyc01g011190.1 Solanum lycopersicum HOM05D006510 ORTHO05D008171 6.0e-13 80.5 57 63.2
MCO09G591 Micromonas commoda HOM05D006510 ORTHO05D008171 1.0e-12 79.7 586 22.9
Hund07777 Selenicereus undatus HOM05D006510 ORTHO05D008171 2.3e-12 78.6 67 58.2
HanXRQChr09g0251831 Helianthus annuus HOM05D006510 ORTHO05D008171 3.0e-12 78.2 57 64.9
arahy.Tifrunner.gnm1.ann1.JPYC3C Arachis hypogaea HOM05D006510 ORTHO05D008171 4.9e-07 60.8 46 54.3
SEGI_32298 Sequoiadendron giganteum HOM05D006510 ORTHO05D008171 1.1e-06 59.7 113 36.3


User provided reference genes

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