Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold9G04792 Striga asiatica HOM05D006885 ORTHO05D008606 4.6e-58 227.6 111 100.0
Migut.K00992 Erythranthe guttata HOM05D006885 ORTHO05D008606 1.1e-24 116.7 111 55.9
MSTRG.471 Avicennia marina HOM05D006885 ORTHO05D008606 1.6e-23 112.8 101 59.4
Oeu011334.1 Olea europaea HOM05D006885 ORTHO05D008606 4.0e-22 108.2 110 54.5
SalBow2G1383 Salvia bowleyana HOM05D006885 ORTHO05D008606 4.0e-22 108.2 102 57.8
Oeu044483.1 Olea europaea HOM05D006885 ORTHO05D008606 3.4e-21 105.1 110 54.5
unitig_26.g10421 Utricularia gibba HOM05D006885 ORTHO05D008606 4.5e-21 104.8 103 57.3
Nitab4.5_0000913g0010 Nicotiana tabacum HOM05D006885 ORTHO05D008606 7.6e-21 104.0 94 60.6
Peaxi162Scf00962g00024 Petunia axillaris HOM05D006885 ORTHO05D008606 7.6e-21 104.0 105 54.3
Hma1.2p1_0459F.1_g157320 Hydrangea macrophylla HOM05D006885 ORTHO05D008606 1.0e-20 103.6 107 54.2
CAN.G1264.4 Capsicum annuum HOM05D006885 ORTHO05D008606 2.9e-20 102.1 105 54.3
Sopen01g005380 Solanum pennellii HOM05D006885 ORTHO05D008606 4.9e-20 101.3 105 54.3
Cc11_g17420 Coffea canephora HOM05D006885 ORTHO05D008606 1.4e-19 99.8 105 55.2
CsaV3_6G007910 Cucumis sativus L. HOM05D006885 ORTHO05D008606 1.4e-19 99.8 104 53.8
Cfa008736 Carpinus fangiana HOM05D000120 ORTHO05D000068 1.9e-19 99.4 93 58.1
CiPaw.05G104600 Carya illinoinensis HOM05D006885 ORTHO05D008606 1.9e-19 99.4 93 58.1
Ciclev10033198m.g Citrus clementina HOM05D006885 ORTHO05D008606 1.9e-19 99.4 93 58.1
Haze_11752 Corylus avellana HOM05D006885 ORTHO05D008606 1.9e-19 99.4 108 52.8
Duzib052G0936 Durio zibethinus HOM05D006885 ORTHO05D008606 1.9e-19 99.4 108 52.8
TWI75G1759 Tripterygium wilfordii HOM05D006885 ORTHO05D008606 1.9e-19 99.4 104 53.8
ClCG06G001860 Citrullus lanatus HOM05D006885 ORTHO05D008606 2.5e-19 99.0 100 56.0
PGSC0003DMG400011888 Solanum tuberosum HOM05D006885 ORTHO05D008606 2.5e-19 99.0 105 53.3
Duzib248G1150 Durio zibethinus HOM05D006885 ORTHO05D008606 3.2e-19 98.6 94 57.4
Gohir.A04G101300 Gossypium hirsutum HOM05D006885 ORTHO05D008606 3.2e-19 98.6 102 53.9
RcHm_v2.0_Chr4g0429451 Rosa chinensis HOM05D006885 ORTHO05D008606 3.2e-19 98.6 100 53.0
CANSAT01G1896 Cannabis sativa HOM05D006885 ORTHO05D008606 4.2e-19 98.2 99 54.5
Gohir.D04G140400 Gossypium hirsutum HOM05D006885 ORTHO05D008606 4.2e-19 98.2 97 54.6
Actinidia19564 Actinidia chinensis HOM05D006885 ORTHO05D008606 5.5e-19 97.8 93 55.9
Gorai.012G125400 Gossypium raimondii HOM05D006885 ORTHO05D008606 5.5e-19 97.8 102 53.9
FvH4_4g23120 Fragaria vesca HOM05D006885 ORTHO05D008606 7.1e-19 97.4 91 58.2
FAN07G1762 Fragaria x ananassa HOM05D006885 ORTHO05D008606 7.1e-19 97.4 91 58.2
FAN12G2334 Fragaria x ananassa HOM05D006885 ORTHO05D008606 7.1e-19 97.4 91 58.2
FAN17G2783 Fragaria x ananassa HOM05D006885 ORTHO05D008606 7.1e-19 97.4 91 58.2
Lj6A834T26 Lonicera japonica HOM05D006885 ORTHO05D008606 1.2e-18 96.7 104 53.8
AUR62005687 Chenopodium quinoa HOM05D006885 ORTHO05D008606 1.6e-18 96.3 93 54.8
AUR62028871 Chenopodium quinoa HOM05D006885 ORTHO05D008606 1.6e-18 96.3 93 54.8
Manes.11G080000 Manihot esculenta HOM05D006885 ORTHO05D008606 1.6e-18 96.3 105 50.5
MELO3C035240.2 Cucumis melo HOM05D006885 ORTHO05D008606 2.1e-18 95.9 146 43.2
ECA232G0525 Erigeron canadensis HOM05D006885 ORTHO05D008606 2.1e-18 95.9 100 53.0
Potri.001G325000 Populus trichocarpa HOM05D006885 ORTHO05D008606 2.1e-18 95.9 104 51.9
Sed0025765 Sechium edule HOM05D006885 ORTHO05D008606 2.1e-18 95.9 100 53.0
Dinv33305 Davidia involucrata HOM05D006885 ORTHO05D008606 2.7e-18 95.5 91 56.0
PGR119G0226 Punica granatum HOM05D006885 ORTHO05D008606 2.7e-18 95.5 104 52.9
CiPaw.06G106900 Carya illinoinensis HOM05D006885 ORTHO05D008606 4.6e-18 94.7 105 51.4
Medtr3g074700 Medicago truncatula HOM05D006885 ORTHO05D008606 4.6e-18 94.7 100 52.0
Thecc.02G198000 Theobroma cacao HOM05D006885 ORTHO05D008606 4.6e-18 94.7 104 51.9
Sabra16G0207500 Salix brachista HOM05D006885 ORTHO05D008606 7.9e-18 94.0 104 51.9
Manes.04G090052 Manihot esculenta HOM05D006885 ORTHO05D008606 1.0e-17 93.6 104 50.0
Ca_06520_v3 Cicer arietinum L. HOM05D006885 ORTHO05D008606 1.3e-17 93.2 99 52.5
Nn2g15930 Nelumbo nucifera HOM05D006885 ORTHO05D008606 1.3e-17 93.2 104 50.0
Prupe.1G220300 Prunus persica HOM05D006885 ORTHO05D008606 1.3e-17 93.2 105 51.4
Eucgr.B03538 Eucalyptus grandis HOM05D006885 ORTHO05D008606 1.8e-17 92.8 92 55.4
Lsat_1_v5_gn_4_1780 Lactuca sativa HOM05D006885 ORTHO05D008606 1.8e-17 92.8 99 53.5
TPR.G15605 Trifolium pratense HOM05D006885 ORTHO05D008606 1.8e-17 92.8 100 51.0
Atru.chr11.2397 Acer truncatum HOM05D006885 ORTHO05D008606 2.3e-17 92.4 105 50.5
Thhalv10009236m.g Eutrema salsugineum HOM05D006885 ORTHO05D008606 2.3e-17 92.4 91 56.0
MD13G1125100 Malus domestica HOM05D006885 ORTHO05D008606 2.3e-17 92.4 92 55.4
TAR629G2182 Trochodendron aralioides HOM05D006885 ORTHO05D008606 2.3e-17 92.4 95 53.7
AL1G40850 Arabidopsis lyrata HOM05D006885 ORTHO05D008606 3.9e-17 91.7 91 54.9
MD16G1125900 Malus domestica HOM05D006885 ORTHO05D008606 3.9e-17 91.7 90 56.7
THA.LOC104825479 Tarenaya hassleriana HOM05D006885 ORTHO05D008606 3.9e-17 91.7 93 54.8
AT1G27435 Arabidopsis thaliana HOM05D006885 ORTHO05D008606 5.1e-17 91.3 104 51.0
Carub.0001s2598 Capsella rubella HOM05D006885 ORTHO05D008606 5.1e-17 91.3 99 53.5
CARHR027030 Cardamine hirsuta HOM05D006885 ORTHO05D008606 5.1e-17 91.3 86 57.0
DCAR_024641 Daucus carota HOM05D006885 ORTHO05D008606 5.1e-17 91.3 98 50.0
Ah.03g135790 Amaranthus hybridus HOM05D006885 ORTHO05D008606 6.7e-17 90.9 46 89.1
Phvul.008G000900 Phaseolus vulgaris HOM05D006885 ORTHO05D008606 1.1e-16 90.1 87 56.3
Aqoxy5G03235 Aquilegia oxysepala HOM05D006885 ORTHO05D008606 1.5e-16 89.7 105 50.5
Aa31LG7G9990 Aethionema arabicum HOM05D006885 ORTHO05D008606 1.9e-16 89.4 103 50.5
Psat0s1880g0200 Pisum sativum HOM05D006885 ORTHO05D008606 2.5e-16 89.0 100 52.0
Sp1g23670 Schrenkiella parvula HOM05D006885 ORTHO05D008606 3.3e-16 88.6 49 83.7
LjContig00312_ERROPOS870357g0004846 Lotus japonicus HOM05D006885 ORTHO05D008606 4.3e-16 88.2 102 51.0
A07p11750 Brassica napus HOM05D006885 ORTHO05D008606 7.4e-16 87.4 73 61.6
Dinv25633 Davidia involucrata HOM05D006885 ORTHO05D008606 7.4e-16 87.4 104 47.1
SalBow1G0427 Salvia bowleyana HOM05D006885 ORTHO05D008606 7.4e-16 87.4 94 53.2
Hund25491 Selenicereus undatus HOM05D006885 ORTHO05D008606 7.4e-16 87.4 45 86.7
BcaB03g13983 Brassica carinata HOM05D006885 ORTHO05D008606 9.7e-16 87.0 44 88.6
BcaC01g01613 Brassica carinata HOM05D006885 ORTHO05D008606 9.7e-16 87.0 44 88.6
BcaC01g06952 Brassica carinata HOM05D006885 ORTHO05D008606 9.7e-16 87.0 44 88.6
BcaC06g35293 Brassica carinata HOM05D006885 ORTHO05D008606 9.7e-16 87.0 44 88.6
A08p26290 Brassica napus HOM05D006885 ORTHO05D008606 9.7e-16 87.0 44 88.6
C03p73770 Brassica napus HOM05D006885 ORTHO05D008606 9.7e-16 87.0 44 88.6
C07p17740 Brassica napus HOM05D006885 ORTHO05D008606 9.7e-16 87.0 44 88.6
BolC3t19669H Brassica oleracea HOM05D006885 ORTHO05D008606 9.7e-16 87.0 44 88.6
BolC7t42280H Brassica oleracea HOM05D006885 ORTHO05D008606 9.7e-16 87.0 44 88.6
BraA07t28960Z Brassica rapa HOM05D006885 ORTHO05D008606 9.7e-16 87.0 44 88.6
BraA08t34580Z Brassica rapa HOM05D006885 ORTHO05D008606 9.7e-16 87.0 44 88.6
Dinv09126 Davidia involucrata HOM05D006885 ORTHO05D008606 9.7e-16 87.0 49 81.6
QL03p050754 Quercus lobata HOM05D006885 ORTHO05D008606 1.6e-15 86.3 44 88.6
HPP92_021686 Vanilla planifolia HOM05D006885 ORTHO05D008606 2.2e-15 85.9 93 51.6
PSO017G7113 Papaver somniferum HOM05D006885 ORTHO05D008606 2.8e-15 85.5 105 47.6
CSS0038255 Camellia sinensis var. sinensis HOM05D006885 ORTHO05D008606 8.2e-15 84.0 44 86.4
Glyma.08G361800 Glycine max HOM05D006885 ORTHO05D008606 8.2e-15 84.0 43 88.4
Glyma.18G300000 Glycine max HOM05D006885 ORTHO05D008606 1.1e-14 83.6 86 53.5
HPP92_021628 Vanilla planifolia HOM05D006885 ORTHO05D008606 1.8e-14 82.8 93 50.5
Sc11g0000250 Simmondsia chinensis HOM05D006885 ORTHO05D008606 2.4e-14 82.4 42 88.1
Lalb_Chr10g0091171 Lupinus albus HOM05D006885 ORTHO05D008606 4.1e-14 81.6 87 54.0
HanXRQChr03g0067371 Helianthus annuus HOM05D006885 ORTHO05D008606 6.9e-14 80.9 45 77.8
CDE05G1244 Ceratophyllum demersum HOM05D006885 ORTHO05D008606 1.2e-13 80.1 93 51.6
EL10Ac6g13573 Beta vulgaris HOM05D006885 ORTHO05D008606 1.5e-13 79.7 83 54.2
GSVIVG01000942001 Vitis vinifera HOM05D006885 ORTHO05D008606 2.6e-13 79.0 85 51.8
ATR0582G111 Amborella trichopoda HOM05D006885 ORTHO05D008606 1.0e-12 77.0 98 49.0
Zm00001eb133070 Zea mays HOM05D006885 ORTHO05D008606 2.9e-12 75.5 94 44.7
Zm00001eb408880 Zea mays HOM05D006885 ORTHO05D008606 3.8e-12 75.1 44 75.0
CSS0039361 Camellia sinensis var. sinensis HOM05D006885 ORTHO05D008606 5.0e-12 74.7 131 41.2
SHI04153 Sapria himalayana HOM05D006885 ORTHO05D008606 8.5e-12 73.9 87 49.4
Gohir.D07G189020 Gossypium hirsutum HOM05D006885 ORTHO05D008606 1.1e-11 73.6 42 78.6
Gorai.001G210600 Gossypium raimondii HOM05D006885 ORTHO05D008606 1.1e-11 73.6 42 78.6
Gohir.A06G101502 Gossypium hirsutum HOM05D006885 ORTHO05D008606 3.0e-09 65.5 44 65.9
MBI12_g28748_MAGBIO Magnolia biondii HOM05D006885 ORTHO05D008606 5.7e-08 61.2 84 44.0
Gohir.D02G113400 Gossypium hirsutum HOM05D006885 ORTHO05D008606 2.2e-07 59.3 32 78.1
Gorai.005G128300 Gossypium raimondii HOM05D006885 ORTHO05D008606 2.2e-07 59.3 32 78.1
TPR.G7690 Trifolium pratense HOM05D006885 ORTHO05D008606 2.2e-07 59.3 28 85.7


User provided reference genes

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