Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold9G04766 Striga asiatica HOM05D007857 ORTHO05D009355 6.3e-140 500.7 251 100.0
SalBow2G3021 Salvia bowleyana HOM05D007857 ORTHO05D009355 4.7e-34 149.1 299 37.8
Migut.K00709 Erythranthe guttata HOM05D007857 ORTHO05D009355 1.3e-28 131.0 255 36.5
Dinv10979 Davidia involucrata HOM05D007857 ORTHO05D009355 1.4e-25 120.9 267 34.5
Oeu020304.1 Olea europaea HOM05D001334 ORTHO05D001119 2.6e-24 116.7 307 33.6
Actinidia20693 Actinidia chinensis HOM05D007857 ORTHO05D009355 1.4e-22 110.9 246 34.6
Hma1.2p1_1239F.1_g269420 Hydrangea macrophylla HOM05D007857 ORTHO05D009355 7.0e-22 108.6 232 35.8
CSS0005757 Camellia sinensis var. sinensis HOM05D007857 ORTHO05D009355 2.0e-21 107.1 229 34.9
Glyma.03G186400 Glycine max HOM05D007857 ORTHO05D009355 8.6e-20 101.7 215 32.6
Rhsim12G0103100 Rhododendron simsii HOM05D007857 ORTHO05D009355 1.9e-19 100.5 253 30.8
TAR374G0584 Trochodendron aralioides HOM05D007857 ORTHO05D009355 1.9e-19 100.5 248 31.0
arahy.Tifrunner.gnm1.ann1.32T9N9 Arachis hypogaea HOM05D007857 ORTHO05D009355 2.5e-19 100.1 212 32.5
arahy.Tifrunner.gnm1.ann1.AFM6H1 Arachis hypogaea HOM05D007857 ORTHO05D009355 2.5e-19 100.1 212 32.5
arahy.Tifrunner.gnm1.ann1.ZB6N55 Arachis hypogaea HOM05D007857 ORTHO05D009355 2.5e-19 100.1 212 32.5
CiPaw.06G100500 Carya illinoinensis HOM05D007857 ORTHO05D009355 7.3e-19 98.6 120 42.5
Solyc04g045390.1 Solanum lycopersicum HOM05D007857 ORTHO05D009355 8.0e-18 95.1 247 31.6
Thecc.02G276200 Theobroma cacao HOM05D007857 ORTHO05D009355 1.0e-17 94.7 128 42.2
MELO3C010736.2 Cucumis melo HOM05D007857 ORTHO05D009355 1.4e-17 94.4 226 31.0
TWI75G0924 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 1.8e-17 94.0 109 46.8
Ca_18058_v3 Cicer arietinum L. HOM05D007857 ORTHO05D009355 2.3e-17 93.6 109 44.0
TAR622G0135 Trochodendron aralioides HOM05D007857 ORTHO05D009355 2.3e-17 93.6 272 29.4
VMungo0251G2942 Vigna mungo HOM05D007857 ORTHO05D009355 2.3e-17 93.6 112 42.0
ClCG08G017230 Citrullus lanatus HOM05D007857 ORTHO05D009355 8.9e-17 91.7 171 33.9
Dinv14814 Davidia involucrata HOM05D007857 ORTHO05D009355 8.9e-17 91.7 270 31.1
Glyma.19G186500 Glycine max HOM05D007857 ORTHO05D009355 8.9e-17 91.7 219 31.1
Sc04g0010010 Simmondsia chinensis HOM05D007857 ORTHO05D009355 1.5e-16 90.9 241 31.1
Sabra10G0047600 Salix brachista HOM05D007857 ORTHO05D009355 2.0e-16 90.5 117 45.3
CsaV3_2G025390 Cucumis sativus L. HOM05D007857 ORTHO05D009355 2.6e-16 90.1 219 32.0
Phvul.002G175100 Phaseolus vulgaris HOM05D007857 ORTHO05D009355 2.6e-16 90.1 222 32.9
CANSAT01G1499 Cannabis sativa HOM05D007857 ORTHO05D009355 3.4e-16 89.7 112 42.0
QL03p054319 Quercus lobata HOM05D007857 ORTHO05D009355 7.5e-16 88.6 248 31.5
TPR.G17074 Trifolium pratense HOM05D007857 ORTHO05D009355 9.8e-16 88.2 114 38.6
Lalb_Chr07g0187361 Lupinus albus HOM05D007857 ORTHO05D009355 1.3e-15 87.8 105 41.0
TWI36G0032 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 1.3e-15 87.8 116 44.8
TWI36G1497 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 1.3e-15 87.8 116 44.8
Lj4g0021592 Lotus japonicus HOM05D007857 ORTHO05D009355 1.7e-15 87.4 109 40.4
RcHm_v2.0_Chr4g0430861 Rosa chinensis HOM05D007857 ORTHO05D009355 1.7e-15 87.4 110 40.9
Atru.chr11.2290 Acer truncatum HOM05D007857 ORTHO05D009355 2.2e-15 87.0 215 34.0
Medtr8g080270 Medicago truncatula HOM05D007857 ORTHO05D009355 2.9e-15 86.7 232 30.6
Psat7g078480 Pisum sativum HOM05D007857 ORTHO05D009355 2.9e-15 86.7 232 32.3
Cfa009341 Carpinus fangiana HOM05D007857 ORTHO05D009355 4.9e-15 85.9 109 43.1
Haze_12382 Corylus avellana HOM05D007857 ORTHO05D009355 4.9e-15 85.9 109 44.0
Nn4g22377 Nelumbo nucifera HOM05D007857 ORTHO05D009355 4.9e-15 85.9 124 38.7
Glyma.05G146200 Glycine max HOM05D007857 ORTHO05D009355 8.3e-15 85.1 218 30.7
MD13G1115600 Malus domestica HOM05D007857 ORTHO05D009355 1.1e-14 84.7 127 40.2
Aqoxy3G01489 Aquilegia oxysepala HOM05D007857 ORTHO05D009355 1.4e-14 84.3 109 43.1
Sed0017756 Sechium edule HOM05D007857 ORTHO05D009355 1.8e-14 84.0 113 38.9
Potri.008G177300 Populus trichocarpa HOM05D007857 ORTHO05D009355 2.4e-14 83.6 113 44.2
DCAR_031188 Daucus carota HOM05D007857 ORTHO05D009355 3.2e-14 83.2 210 31.4
MD16G1115600 Malus domestica HOM05D007857 ORTHO05D009355 5.4e-14 82.4 113 42.5
Sed0006532 Sechium edule HOM05D007857 ORTHO05D009355 7.0e-14 82.0 225 29.3
Manes.13G017400 Manihot esculenta HOM05D007857 ORTHO05D009355 1.2e-13 81.3 206 29.6
Potri.010G057800 Populus trichocarpa HOM05D007857 ORTHO05D009355 1.2e-13 81.3 114 44.7
Ciclev10033758m.g Citrus clementina HOM05D007857 ORTHO05D009355 1.6e-13 80.9 229 28.8
FvH4_4g24090 Fragaria vesca HOM05D007857 ORTHO05D009355 2.0e-13 80.5 114 37.7
MBI11_g31349_MAGBIO Magnolia biondii HOM05D007857 ORTHO05D009355 3.5e-13 79.7 110 40.9
Prupe.1G231500 Prunus persica HOM05D007857 ORTHO05D009355 5.9e-13 79.0 112 41.1
FAN12G2990 Fragaria x ananassa HOM05D007857 ORTHO05D009355 1.0e-12 78.2 114 37.7
FAN07G0728 Fragaria x ananassa HOM05D007857 ORTHO05D009355 1.3e-12 77.8 114 36.0
Eucgr.H04657 Eucalyptus grandis HOM05D007857 ORTHO05D009355 2.5e-11 73.6 221 28.1
COL.COLO4_20347 Corchorus olitorius HOM05D007857 ORTHO05D009355 3.3e-11 73.2 106 41.5
Aqoxy5G03443 Aquilegia oxysepala HOM05D007857 ORTHO05D009355 4.3e-11 72.8 113 37.2
AT1G67540 Arabidopsis thaliana HOM05D010720 ORTHO05D009355 5.6e-11 72.4 230 30.9
AL2G26210 Arabidopsis lyrata HOM05D010720 ORTHO05D009355 7.3e-11 72.0 116 39.7
PSO063G0898 Papaver somniferum HOM05D007857 ORTHO05D009355 1.2e-10 71.2 118 35.6
BcaNung05070 Brassica carinata HOM05D010720 ORTHO05D009355 2.1e-10 70.5 214 30.4
A07p34090 Brassica napus HOM05D010720 ORTHO05D009355 2.8e-10 70.1 116 38.8
C06p42700 Brassica napus HOM05D010720 ORTHO05D009355 2.8e-10 70.1 116 38.8
BolC6t39169H Brassica oleracea HOM05D010720 ORTHO05D009355 2.8e-10 70.1 116 38.8
BraA07t31035Z Brassica rapa HOM05D010720 ORTHO05D009355 3.6e-10 69.7 116 38.8
CARHR060110 Cardamine hirsuta HOM05D010720 ORTHO05D009355 8.0e-10 68.6 111 37.8
Gohir.A03G127600 Gossypium hirsutum HOM05D007857 ORTHO05D009355 8.0e-10 68.6 108 39.8
Gohir.D02G151200 Gossypium hirsutum HOM05D007857 ORTHO05D009355 8.0e-10 68.6 108 40.7
Gorai.005G169600 Gossypium raimondii HOM05D007857 ORTHO05D009355 8.0e-10 68.6 108 40.7
PSO782G1056 Papaver somniferum HOM05D007857 ORTHO05D009355 8.0e-10 68.6 252 26.2
Aa31sc48G30 Aethionema arabicum HOM05D010720 ORTHO05D009355 1.0e-09 68.2 212 29.2
THA.LOC104807888 Tarenaya hassleriana HOM05D010720 ORTHO05D009355 1.4e-09 67.8 112 36.6
BcaB03g15187 Brassica carinata HOM05D010720 ORTHO05D009355 5.2e-09 65.9 116 37.1
PGR119G0189 Punica granatum HOM05D007857 ORTHO05D009355 6.8e-09 65.5 234 26.5
PSO357G0688 Papaver somniferum HOM05D007857 ORTHO05D009355 1.2e-08 64.7 118 35.6
BcaB05g24293 Brassica carinata HOM05D010720 ORTHO05D009355 9.8e-08 61.6 112 35.7
PGSC0003DMG400017971 Solanum tuberosum HOM05D007857 ORTHO05D009355 1.3e-07 61.2 193 29.0
Thhalv10019017m.g Eutrema salsugineum HOM05D010720 ORTHO05D009355 1.7e-07 60.8 120 36.7
BcaC03g14845 Brassica carinata HOM05D010720 ORTHO05D009355 6.4e-07 58.9 116 36.2
BolC2t08453H Brassica oleracea HOM05D010720 ORTHO05D009355 6.4e-07 58.9 116 36.2
Cpa.g.sc43.26 Carica papaya HOM05D007857 ORTHO05D009355 6.4e-07 58.9 84 42.9
SHI17949 Sapria himalayana HOM05D007857 ORTHO05D009355 1.4e-06 57.8 79 38.0


User provided reference genes

Program Settings