Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold9G04716 Striga asiatica HOM05D007500 ORTHO05D009197 5.1e-70 267.7 141 100.0
MSTRG.7998 Avicennia marina HOM05D007500 ORTHO05D009197 1.0e-46 190.3 142 73.2
Migut.K00728 Erythranthe guttata HOM05D007500 ORTHO05D009197 1.5e-42 176.4 140 67.1
Solyc05g015330.1 Solanum lycopersicum HOM05D007500 ORTHO05D009197 7.4e-37 157.5 139 61.2
Sopen05g010600 Solanum pennellii HOM05D007500 ORTHO05D009197 1.3e-36 156.8 139 61.2
SalBow2G0500 Salvia bowleyana HOM05D007500 ORTHO05D009197 4.1e-35 151.8 113 69.0
PGSC0003DMG400029106 Solanum tuberosum HOM05D007500 ORTHO05D009197 4.1e-35 151.8 130 62.3
Cc11_g16840 Coffea canephora HOM05D007500 ORTHO05D009197 5.9e-34 147.9 138 58.7
Nitab4.5_0001404g0040 Nicotiana tabacum HOM05D007500 ORTHO05D009197 5.9e-34 147.9 143 58.0
COL.COLO4_20391 Corchorus olitorius HOM05D007500 ORTHO05D009197 1.7e-33 146.4 139 59.0
Peaxi162Scf00128g00124 Petunia axillaris HOM05D007500 ORTHO05D009197 1.7e-33 146.4 130 59.2
Dinv14836 Davidia involucrata HOM05D007500 ORTHO05D009197 6.5e-33 144.4 141 56.7
unitig_26.g10395 Utricularia gibba HOM05D007500 ORTHO05D009197 8.5e-33 144.1 136 58.1
CSS0001813 Camellia sinensis var. sinensis HOM05D007500 ORTHO05D009197 1.4e-32 143.3 121 62.0
arahy.Tifrunner.gnm1.ann1.Z93F9T Arachis hypogaea HOM05D007500 ORTHO05D009197 4.2e-32 141.7 138 55.8
Sabra01G0039500 Salix brachista HOM05D007500 ORTHO05D009197 5.5e-32 141.4 121 57.9
Gohir.D02G150000 Gossypium hirsutum HOM05D007500 ORTHO05D009197 7.2e-32 141.0 138 55.8
Gorai.005G168300 Gossypium raimondii HOM05D007500 ORTHO05D009197 7.2e-32 141.0 138 55.8
Duzib268G0307 Durio zibethinus HOM05D007500 ORTHO05D009197 1.6e-31 139.8 129 60.5
Lsat_1_v5_gn_8_131281 Lactuca sativa HOM05D007500 ORTHO05D009197 1.6e-31 139.8 119 57.1
CANSAT01G0539 Cannabis sativa HOM05D007500 ORTHO05D009197 2.1e-31 139.4 131 56.5
Gohir.A03G126600 Gossypium hirsutum HOM05D007500 ORTHO05D009197 2.1e-31 139.4 138 56.5
Potri.001G055000 Populus trichocarpa HOM05D007500 ORTHO05D009197 3.6e-31 138.7 121 57.0
Thecc.02G209700 Theobroma cacao HOM05D007500 ORTHO05D009197 3.6e-31 138.7 129 57.4
Haze_12411 Corylus avellana HOM05D007500 ORTHO05D009197 7.9e-31 137.5 140 52.9
CiPaw.05G110500 Carya illinoinensis HOM05D007500 ORTHO05D009197 1.3e-30 136.7 121 59.5
Nitab4.5_0000861g0040 Nicotiana tabacum HOM05D007500 ORTHO05D009197 1.8e-30 136.3 122 61.5
Atru.chr11.2314 Acer truncatum HOM05D007500 ORTHO05D009197 8.7e-30 134.0 120 55.0
MELO3C011458.2 Cucumis melo HOM05D007500 ORTHO05D009197 1.9e-29 132.9 140 55.0
Carub.0008s0545 Capsella rubella HOM05D007500 ORTHO05D009197 2.5e-29 132.5 138 57.2
QL03p052860 Quercus lobata HOM05D007500 ORTHO05D009197 2.5e-29 132.5 142 51.4
QL03p053117 Quercus lobata HOM05D007500 ORTHO05D009197 2.5e-29 132.5 142 51.4
CsaV3_6G032240 Cucumis sativus L. HOM05D007500 ORTHO05D009197 3.3e-29 132.1 122 59.0
Cpa.g.sc43.48 Carica papaya HOM05D007500 ORTHO05D009197 4.3e-29 131.7 139 54.7
FAN12G0274 Fragaria x ananassa HOM05D007500 ORTHO05D009197 4.3e-29 131.7 136 52.9
Glyma.11G250000 Glycine max HOM05D007500 ORTHO05D009197 4.3e-29 131.7 132 57.6
QL93p2010_0098 Quercus lobata HOM05D007500 ORTHO05D009197 4.3e-29 131.7 142 51.4
Ciclev10033679m.g Citrus clementina HOM05D007500 ORTHO05D009197 5.7e-29 131.3 138 52.2
Sc14g0009050 Simmondsia chinensis HOM05D007500 ORTHO05D009197 5.7e-29 131.3 140 56.4
FAN17G2194 Fragaria x ananassa HOM05D007500 ORTHO05D009197 7.4e-29 131.0 138 53.6
Actinidia30653 Actinidia chinensis HOM05D007500 ORTHO05D009197 1.3e-28 130.2 117 57.3
Cfa009364 Carpinus fangiana HOM05D007500 ORTHO05D009197 1.3e-28 130.2 140 53.6
FvH4_4g23840 Fragaria vesca HOM05D007500 ORTHO05D009197 1.3e-28 130.2 136 52.2
Glyma.18G007100 Glycine max HOM05D007500 ORTHO05D009197 1.3e-28 130.2 138 55.1
Sed0012176 Sechium edule HOM05D007500 ORTHO05D009197 1.3e-28 130.2 138 53.6
FAN22G1415 Fragaria x ananassa HOM05D007500 ORTHO05D009197 1.6e-28 129.8 138 52.9
Aqoxy6G00433 Aquilegia oxysepala HOM05D007500 ORTHO05D009197 2.2e-28 129.4 144 53.5
PSO541G0382 Papaver somniferum HOM05D007500 ORTHO05D009197 2.2e-28 129.4 119 55.5
VMungo1383G3421 Vigna mungo HOM05D007500 ORTHO05D009197 2.2e-28 129.4 138 54.3
PGR102G0196 Punica granatum HOM05D007500 ORTHO05D009197 2.8e-28 129.0 139 54.7
Rhsim12G0026300 Rhododendron simsii HOM05D007500 ORTHO05D009197 8.2e-28 127.5 126 57.1
THA.LOC104814194 Tarenaya hassleriana HOM05D007500 ORTHO05D009197 8.2e-28 127.5 121 57.9
Manes.12G012100 Manihot esculenta HOM05D007500 ORTHO05D009197 1.4e-27 126.7 127 53.5
Phvul.001G261300 Phaseolus vulgaris HOM05D007500 ORTHO05D009197 1.4e-27 126.7 138 53.6
AL8G17240 Arabidopsis lyrata HOM05D007500 ORTHO05D009197 1.8e-27 126.3 120 59.2
C07p25790 Brassica napus HOM05D007500 ORTHO05D009197 2.4e-27 125.9 128 56.2
FAN07G2442 Fragaria x ananassa HOM05D007500 ORTHO05D009197 3.1e-27 125.6 138 51.4
AT5G43250 Arabidopsis thaliana HOM05D007500 ORTHO05D009197 4.1e-27 125.2 120 58.3
BcaC06g31713 Brassica carinata HOM05D007500 ORTHO05D009197 4.1e-27 125.2 126 54.0
BcaC06g31714 Brassica carinata HOM05D007500 ORTHO05D009197 4.1e-27 125.2 126 54.0
Lj6g0001546 Lotus japonicus HOM05D007500 ORTHO05D009197 4.1e-27 125.2 130 52.3
Sp2g08040 Schrenkiella parvula HOM05D007500 ORTHO05D009197 4.1e-27 125.2 129 55.8
ClCG08G010070 Citrullus lanatus HOM05D007500 ORTHO05D009197 5.3e-27 124.8 138 52.9
TWI18G0612 Tripterygium wilfordii HOM05D007500 ORTHO05D009197 5.3e-27 124.8 139 53.2
BcaC06g34668 Brassica carinata HOM05D007500 ORTHO05D009197 6.9e-27 124.4 127 55.9
BolC7t43101H Brassica oleracea HOM05D007500 ORTHO05D009197 6.9e-27 124.4 127 55.9
Thhalv10003290m.g Eutrema salsugineum HOM05D007500 ORTHO05D009197 6.9e-27 124.4 129 55.0
TAR381G0854 Trochodendron aralioides HOM05D007500 ORTHO05D009197 6.9e-27 124.4 140 51.4
Ca_16464_v3 Cicer arietinum L. HOM05D007500 ORTHO05D009197 1.2e-26 123.6 139 53.2
MBI01_g29007_MAGBIO Magnolia biondii HOM05D007500 ORTHO05D009197 1.2e-26 123.6 119 52.9
A06p47960 Brassica napus HOM05D007500 ORTHO05D009197 2.0e-26 122.9 121 56.2
BraA06t27666Z Brassica rapa HOM05D007500 ORTHO05D009197 2.0e-26 122.9 121 56.2
HanXRQChr09g0258281 Helianthus annuus HOM05D007500 ORTHO05D009197 2.6e-26 122.5 138 49.3
CAN.G43.17 Capsicum annuum HOM05D007500 ORTHO05D009197 3.4e-26 122.1 113 61.1
Aa31LG9G13320 Aethionema arabicum HOM05D007500 ORTHO05D009197 5.9e-26 121.3 120 53.3
CARHR180640 Cardamine hirsuta HOM05D007500 ORTHO05D009197 7.7e-26 120.9 120 55.8
Medtr3g085430 Medicago truncatula HOM05D007500 ORTHO05D009197 7.7e-26 120.9 136 51.5
Psat5g095440 Pisum sativum HOM05D007500 ORTHO05D009197 1.0e-25 120.6 143 51.7
Lalb_Chr08g0230661 Lupinus albus HOM05D007500 ORTHO05D009197 2.2e-25 119.4 138 48.6
Nn5g28851 Nelumbo nucifera HOM05D007500 ORTHO05D009197 2.2e-25 119.4 138 50.7
Prupe.1G226700 Prunus persica HOM05D007500 ORTHO05D009197 2.9e-25 119.0 86 67.4
AUR62024115 Chenopodium quinoa HOM05D007500 ORTHO05D009197 5.0e-25 118.2 136 49.3
TPR.G28279 Trifolium pratense HOM05D007500 ORTHO05D009197 5.0e-25 118.2 117 58.1
ECA233G2547 Erigeron canadensis HOM05D007500 ORTHO05D009197 8.5e-25 117.5 111 54.1
PSO675G4883 Papaver somniferum HOM05D007500 ORTHO05D009197 1.1e-24 117.1 109 55.0
EL10Ac6g13495 Beta vulgaris HOM05D007500 ORTHO05D009197 1.4e-24 116.7 138 48.6
RcHm_v2.0_Chr4g0430411 Rosa chinensis HOM05D007500 ORTHO05D009197 5.5e-24 114.8 110 55.5
MD16G1118400 Malus domestica HOM05D007500 ORTHO05D009197 7.2e-24 114.4 121 50.4
AUR62005615 Chenopodium quinoa HOM05D007500 ORTHO05D009197 1.6e-23 113.2 100 58.0
MD13G1118300 Malus domestica HOM05D007500 ORTHO05D009197 3.6e-23 112.1 123 49.6
DCAR_031200 Daucus carota HOM05D007500 ORTHO05D009197 7.9e-23 110.9 130 47.7
CDE06G2379 Ceratophyllum demersum HOM05D007500 ORTHO05D009197 3.0e-22 109.0 130 46.9
ATR1120G099 Amborella trichopoda HOM05D007500 ORTHO05D009197 8.8e-22 107.5 118 54.2
Ah.03g136190 Amaranthus hybridus HOM05D007500 ORTHO05D009197 1.1e-21 107.1 106 56.6
Os01g0183400 Oryza sativa ssp. japonica HOM05D007500 ORTHO05D009197 3.1e-19 99.0 122 45.1
Zm00001eb122050 Zea mays HOM05D007500 ORTHO05D009197 1.0e-17 94.0 143 41.3
HPP92_002864 Vanilla planifolia HOM05D007500 ORTHO05D009197 1.4e-16 90.1 108 43.5
CAN.G1248.23 Capsicum annuum HOM05D000764 ORTHO05D009197 1.6e-10 70.1 63 57.1
SEGI_35529 Sequoiadendron giganteum HOM05D007500 ORTHO05D009197 3.8e-09 65.5 76 42.1
SMO358G0741 Selaginella moellendorffii HOM05D020496 ORTHO05D009197 6.7e-06 54.7 80 37.5


User provided reference genes

Program Settings