Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold9G04680 Striga asiatica HOM05D006087 ORTHO05D007479 4.8e-54 214.2 102 100.0
Oeu036868.1 Olea europaea HOM05D006087 ORTHO05D007479 2.7e-36 155.2 102 78.4
Atru.chr11.2326 Acer truncatum HOM05D006087 ORTHO05D007479 6.5e-35 150.6 102 74.5
Oeu004448.1 Olea europaea HOM05D006087 ORTHO05D007479 6.5e-35 150.6 102 75.5
TWI75G0102 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 6.5e-35 150.6 101 75.2
Cc11_g16920 Coffea canephora HOM05D006087 ORTHO05D007479 1.1e-34 149.8 102 72.5
THA.LOC104812595 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 1.1e-34 149.8 102 74.5
CAN.G163.9 Capsicum annuum HOM05D006087 ORTHO05D007479 1.5e-34 149.4 102 73.5
Lalb_Chr12g0206161 Lupinus albus HOM05D006087 ORTHO05D007479 1.9e-34 149.1 102 71.6
TWI36G1569 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 2.5e-34 148.7 99 73.7
unitig_749.g13305 Utricularia gibba HOM05D006087 ORTHO05D007479 2.5e-34 148.7 100 72.0
A06p47950 Brassica napus HOM05D006087 ORTHO05D007479 4.2e-34 147.9 100 71.0
C07p25860 Brassica napus HOM05D006087 ORTHO05D007479 4.2e-34 147.9 100 71.0
BolC7t43103H Brassica oleracea HOM05D006087 ORTHO05D007479 4.2e-34 147.9 100 71.0
BraA06t27665Z Brassica rapa HOM05D006087 ORTHO05D007479 4.2e-34 147.9 100 71.0
Sp2g08050 Schrenkiella parvula HOM05D006087 ORTHO05D007479 7.2e-34 147.1 100 70.0
MD16G1119600 Malus domestica HOM05D006087 ORTHO05D007479 9.4e-34 146.7 101 71.3
A09p20220 Brassica napus HOM05D006087 ORTHO05D007479 1.6e-33 146.0 100 70.0
Lsat_1_v5_gn_4_3481 Lactuca sativa HOM05D006087 ORTHO05D007479 2.1e-33 145.6 102 70.6
Ciclev10033174m.g Citrus clementina HOM05D006087 ORTHO05D007479 2.7e-33 145.2 102 72.5
Manes.12G011100 Manihot esculenta HOM05D006087 ORTHO05D007479 2.7e-33 145.2 102 72.5
Solyc05g015470.1 Solanum lycopersicum HOM05D006087 ORTHO05D007479 2.7e-33 145.2 99 74.7
Sopen05g010780 Solanum pennellii HOM05D006087 ORTHO05D007479 2.7e-33 145.2 99 74.7
Sc04g0010140 Simmondsia chinensis HOM05D006087 ORTHO05D007479 3.6e-33 144.8 102 71.6
CiPaw.05G109600 Carya illinoinensis HOM05D006087 ORTHO05D007479 4.7e-33 144.4 102 70.6
PGSC0003DMG400014051 Solanum tuberosum HOM05D006087 ORTHO05D007479 4.7e-33 144.4 99 74.7
BcaC04g21941 Brassica carinata HOM05D006087 ORTHO05D007479 6.1e-33 144.1 100 69.0
C09p25630 Brassica napus HOM05D006087 ORTHO05D007479 6.1e-33 144.1 100 69.0
BolC9t55466H Brassica oleracea HOM05D006087 ORTHO05D007479 6.1e-33 144.1 100 69.0
Eucgr.B03495 Eucalyptus grandis HOM05D006087 ORTHO05D007479 6.1e-33 144.1 100 72.0
TWI18G0911 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 6.1e-33 144.1 101 71.3
TAR374G1631 Trochodendron aralioides HOM05D006087 ORTHO05D007479 6.1e-33 144.1 102 70.6
Actinidia20712 Actinidia chinensis HOM05D006087 ORTHO05D007479 8.0e-33 143.7 102 71.6
MELO3C011864.2 Cucumis melo HOM05D006087 ORTHO05D007479 8.0e-33 143.7 101 72.3
Carub.0008s0544 Capsella rubella HOM05D006087 ORTHO05D007479 1.0e-32 143.3 100 68.0
Lj4g0011842 Lotus japonicus HOM05D006087 ORTHO05D007479 1.4e-32 142.9 100 70.0
AL8G17230 Arabidopsis lyrata HOM05D006087 ORTHO05D007479 2.3e-32 142.1 100 67.0
Ah.03g136140 Amaranthus hybridus HOM05D006087 ORTHO05D007479 3.0e-32 141.7 99 70.7
BraA09t37633Z Brassica rapa HOM05D006087 ORTHO05D007479 3.0e-32 141.7 100 68.0
BcaB07g31021 Brassica carinata HOM05D006087 ORTHO05D007479 4.0e-32 141.4 100 68.0
Migut.K00735 Erythranthe guttata HOM05D006087 ORTHO05D007479 4.0e-32 141.4 102 69.6
CANSAT01G2640 Cannabis sativa HOM05D006087 ORTHO05D007479 5.2e-32 141.0 102 70.6
AT5G43260 Arabidopsis thaliana HOM05D006087 ORTHO05D007479 8.8e-32 140.2 100 67.0
FAN07G1634 Fragaria x ananassa HOM05D006087 ORTHO05D007479 1.2e-31 139.8 99 68.7
FAN22G0702 Fragaria x ananassa HOM05D006087 ORTHO05D007479 1.2e-31 139.8 99 68.7
FAN17G2012 Fragaria x ananassa HOM05D006087 ORTHO05D007479 1.5e-31 139.4 99 68.7
MD13G1119200 Malus domestica HOM05D006087 ORTHO05D007479 1.5e-31 139.4 101 70.3
EL10Ac6g13503 Beta vulgaris HOM05D006087 ORTHO05D007479 2.0e-31 139.0 96 69.8
CsaV3_5G030260 Cucumis sativus L. HOM05D006087 ORTHO05D007479 3.4e-31 138.3 101 70.3
Glyma.18G006400 Glycine max HOM05D006087 ORTHO05D007479 3.4e-31 138.3 100 69.0
QL03p052667 Quercus lobata HOM05D006087 ORTHO05D007479 3.4e-31 138.3 101 67.3
TAR622G0081 Trochodendron aralioides HOM05D006087 ORTHO05D007479 3.4e-31 138.3 104 69.2
FAN12G1341 Fragaria x ananassa HOM05D006087 ORTHO05D007479 4.4e-31 137.9 99 67.7
FAN12G1854 Fragaria x ananassa HOM05D006087 ORTHO05D007479 4.4e-31 137.9 99 67.7
COL.COLO4_20404 Corchorus olitorius HOM05D006087 ORTHO05D007479 5.7e-31 137.5 103 70.9
Glyma.11G250700 Glycine max HOM05D006087 ORTHO05D007479 7.5e-31 137.1 100 68.0
HanXRQChr10g0310621 Helianthus annuus HOM05D006087 ORTHO05D007479 7.5e-31 137.1 98 70.4
Potri.001G056601 Populus trichocarpa HOM05D006087 ORTHO05D007479 7.5e-31 137.1 102 69.6
Thecc.02G208200 Theobroma cacao HOM05D006087 ORTHO05D007479 7.5e-31 137.1 103 69.9
RcHm_v2.0_Chr4g0430231 Rosa chinensis HOM05D006087 ORTHO05D007479 9.8e-31 136.7 99 67.7
Gohir.D12G152800 Gossypium hirsutum HOM05D006087 ORTHO05D007479 1.3e-30 136.3 100 70.0
Gorai.008G165300 Gossypium raimondii HOM05D006087 ORTHO05D007479 1.3e-30 136.3 100 70.0
Hma1.2p1_0065F.1_g035460 Hydrangea macrophylla HOM05D006087 ORTHO05D007479 1.7e-30 136.0 102 68.6
Nitab4.5_0000039g0180 Nicotiana tabacum HOM05D006087 ORTHO05D007479 1.7e-30 136.0 99 73.7
Phvul.001G262000 Phaseolus vulgaris HOM05D006087 ORTHO05D007479 1.7e-30 136.0 102 66.7
Aa31LG9G13330 Aethionema arabicum HOM05D006087 ORTHO05D007479 2.8e-30 135.2 100 67.0
Gohir.D04G182800 Gossypium hirsutum HOM05D006087 ORTHO05D007479 4.8e-30 134.4 103 69.9
Gorai.012G175800 Gossypium raimondii HOM05D006087 ORTHO05D007479 4.8e-30 134.4 103 69.9
Nitab4.5_0001808g0020 Nicotiana tabacum HOM05D006087 ORTHO05D007479 4.8e-30 134.4 99 72.7
Cfa009371 Carpinus fangiana HOM05D006087 ORTHO05D007479 6.3e-30 134.0 102 67.6
Haze_12421 Corylus avellana HOM05D006087 ORTHO05D007479 6.3e-30 134.0 102 67.6
Duzib248G0070 Durio zibethinus HOM05D006087 ORTHO05D007479 8.3e-30 133.7 103 68.0
Duzib251G0251 Durio zibethinus HOM05D006087 ORTHO05D007479 8.3e-30 133.7 100 69.0
Medtr3g085300 Medicago truncatula HOM05D006087 ORTHO05D007479 1.1e-29 133.3 102 65.7
ECA234G0111 Erigeron canadensis HOM05D006087 ORTHO05D007479 1.8e-29 132.5 89 71.9
Gohir.A04G139600 Gossypium hirsutum HOM05D006087 ORTHO05D007479 3.1e-29 131.7 103 68.9
CiPaw.06G102800 Carya illinoinensis HOM05D006087 ORTHO05D007479 4.1e-29 131.3 102 65.7
PSO017G6027 Papaver somniferum HOM05D006087 ORTHO05D007479 4.1e-29 131.3 99 68.7
PSO478G2574 Papaver somniferum HOM05D006087 ORTHO05D007479 4.1e-29 131.3 99 68.7
ECA233G2512 Erigeron canadensis HOM05D006443 ORTHO05D007797 1.2e-28 129.8 82 72.0
Ca_16458_v3 Cicer arietinum L. HOM05D006087 ORTHO05D007479 1.6e-28 129.4 102 65.7
Prupe.1G225600 Prunus persica HOM05D006087 ORTHO05D007479 1.6e-28 129.4 101 66.3
MSTRG.8005 Avicennia marina HOM05D006087 ORTHO05D007479 3.5e-28 128.3 99 67.7
TPR.G17782 Trifolium pratense HOM05D006087 ORTHO05D007479 3.5e-28 128.3 102 63.7
CARHR180610 Cardamine hirsuta HOM05D006087 ORTHO05D007479 4.5e-28 127.9 100 62.0
CSS0016505 Camellia sinensis var. sinensis HOM05D006087 ORTHO05D007479 5.9e-28 127.5 87 73.6
CSS0027394 Camellia sinensis var. sinensis HOM05D006087 ORTHO05D007479 5.9e-28 127.5 87 73.6
Migut.E00016 Erythranthe guttata HOM05D006087 ORTHO05D007479 7.7e-28 127.1 104 63.5
Potri.003G171800 Populus trichocarpa HOM05D006087 ORTHO05D007479 7.7e-28 127.1 100 66.0
CDE02G3899 Ceratophyllum demersum HOM05D006087 ORTHO05D007479 1.3e-27 126.3 100 63.0
Gohir.A12G148826 Gossypium hirsutum HOM05D006087 ORTHO05D007479 1.3e-27 126.3 100 66.0
THA.LOC104820522 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 1.3e-27 126.3 102 64.7
Ah.02g130900 Amaranthus hybridus HOM05D006087 ORTHO05D007479 2.3e-27 125.6 96 62.5
THA.LOC104825505 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 2.9e-27 125.2 103 65.0
Aqoxy5G03370 Aquilegia oxysepala HOM05D006087 ORTHO05D007479 6.5e-27 124.0 96 65.6
Psat5g096360 Pisum sativum HOM05D006087 ORTHO05D007479 1.1e-26 123.2 102 62.7
THA.LOC104807129 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 1.9e-26 122.5 103 63.1
Rhsim12G0025700 Rhododendron simsii HOM05D006087 ORTHO05D007479 7.2e-26 120.6 103 61.2
AUR62005621 Chenopodium quinoa HOM05D006087 ORTHO05D007479 1.6e-25 119.4 99 61.6
Cpa.g.sc43.59 Carica papaya HOM05D006087 ORTHO05D007479 2.8e-25 118.6 102 61.8
arahy.Tifrunner.gnm1.ann1.1Z01XL Arachis hypogaea HOM05D006087 ORTHO05D007479 4.7e-25 117.9 102 59.8
AUR62028927 Chenopodium quinoa HOM05D006087 ORTHO05D007479 8.0e-25 117.1 99 61.6
Sed0007875 Sechium edule HOM05D006087 ORTHO05D007479 1.0e-24 116.7 99 57.6
MELO3C010741.2 Cucumis melo HOM05D006087 ORTHO05D007479 3.0e-24 115.2 99 58.6
Duzib268G0474 Durio zibethinus HOM05D006087 ORTHO05D007479 3.0e-24 115.2 103 60.2
ATR0561G204 Amborella trichopoda HOM05D006087 ORTHO05D007479 1.2e-23 113.2 100 59.0
Lalb_Chr23g0278081 Lupinus albus HOM05D006087 ORTHO05D007479 2.2e-22 109.0 102 57.8
PGR102G3303 Punica granatum HOM05D006087 ORTHO05D007479 8.3e-22 107.1 100 58.0
MBI11_g44422_MAGBIO Magnolia biondii HOM05D006087 ORTHO05D007479 1.8e-21 105.9 102 57.8
MD05G1114700 Malus domestica HOM05D006087 ORTHO05D007479 7.0e-21 104.0 83 63.9
Mapoly0062s0032 Marchantia polymorpha HOM05D006087 ORTHO05D007479 7.0e-21 104.0 101 52.5
Pp3c18_21810 Physcomitrium patens HOM05D006087 ORTHO05D007479 7.0e-21 104.0 103 55.3
Pp3c21_520 Physcomitrium patens HOM05D006087 ORTHO05D007479 3.5e-20 101.7 92 54.3
Pp3c22_5660 Physcomitrium patens HOM05D006087 ORTHO05D007479 3.5e-20 101.7 101 51.5
ClCG08G017160 Citrullus lanatus HOM05D006087 ORTHO05D007479 7.8e-20 100.5 99 52.5
HPP92_024307 Vanilla planifolia HOM05D006087 ORTHO05D007479 1.9e-18 95.9 95 57.9
HPP92_024290 Vanilla planifolia HOM05D006087 ORTHO05D007479 2.5e-18 95.5 94 58.5
MBI11_g05327_MAGBIO Magnolia biondii HOM05D006087 ORTHO05D007479 2.1e-17 92.4 73 67.1
CsaV3_2G025430 Cucumis sativus L. HOM05D006087 ORTHO05D007479 6.1e-17 90.9 82 56.1
Hma1.2p1_0349F.1_g132260 Hydrangea macrophylla HOM05D006087 ORTHO05D007479 6.8e-16 87.4 102 55.9
Pp3c14_11460 Physcomitrium patens HOM05D006087 ORTHO05D007479 6.8e-16 87.4 100 50.0
Pp3c17_7480 Physcomitrium patens HOM05D006087 ORTHO05D007479 6.4e-14 80.9 100 46.0
Os02g0506600 Oryza sativa ssp. japonica HOM05D006087 ORTHO05D007479 2.0e-12 75.9 102 43.1
Zm00001eb241730 Zea mays HOM05D006087 ORTHO05D007479 2.0e-12 75.9 94 40.4
Zm00001eb180950 Zea mays HOM05D006087 ORTHO05D007479 6.6e-11 70.9 100 38.0
Cre10.g432100 Chlamydomonas reinhardtii HOM05D006087 ORTHO05D007479 5.2e-08 61.2 50 50.0
Zm00001eb421040 Zea mays HOM05D006087 ORTHO05D007479 6.8e-08 60.8 100 40.0
MCO04G324 Micromonas commoda HOM05D002522 ORTHO05D002744 1.3e-06 56.6 61 44.3


User provided reference genes

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