Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold9G04675 Striga asiatica HOM05D002231 ORTHO05D006103 1.7e-114 416.0 210 100.0
MSTRG.501 Avicennia marina HOM05D002231 ORTHO05D006103 4.3e-81 305.1 210 75.7
MSTRG.8006 Avicennia marina HOM05D002231 ORTHO05D006103 1.7e-77 293.1 210 73.8
Migut.J00960 Erythranthe guttata HOM05D002231 ORTHO05D006103 1.3e-74 283.5 220 72.7
GSVIVG01010488001 Vitis vinifera HOM05D002231 ORTHO05D006103 3.9e-74 282.0 210 72.4
Dinv10954 Davidia involucrata HOM05D002231 ORTHO05D006103 6.6e-74 281.2 217 71.4
unitig_747.g21125 Utricularia gibba HOM05D002231 ORTHO05D006103 2.5e-73 279.3 200 71.0
CSS0047868 Camellia sinensis var. sinensis HOM05D002231 ORTHO05D006103 3.3e-73 278.9 215 71.6
CSS0048016 Camellia sinensis var. sinensis HOM05D002231 ORTHO05D006103 3.3e-73 278.9 215 71.6
SalBow1G3407 Salvia bowleyana HOM05D002231 ORTHO05D006103 1.2e-72 276.9 286 57.0
Lsat_1_v5_gn_4_3541 Lactuca sativa HOM05D002231 ORTHO05D006103 4.7e-72 275.0 218 69.3
Hma1.2p1_0275F.1_g110740 Hydrangea macrophylla HOM05D002231 ORTHO05D006103 3.1e-71 272.3 226 66.8
Sopen04g017470 Solanum pennellii HOM05D002231 ORTHO05D006103 7.5e-70 267.7 210 69.0
Dinv17566 Davidia involucrata HOM05D002231 ORTHO05D005593 2.2e-69 266.2 214 69.6
Actinidia30646 Actinidia chinensis HOM05D002231 ORTHO05D006103 3.7e-69 265.4 217 69.6
Nitab4.5_0002558g0010 Nicotiana tabacum HOM05D002231 ORTHO05D006103 3.7e-69 265.4 216 68.1
Cc11_g16940 Coffea canephora HOM05D002231 ORTHO05D006103 4.9e-69 265.0 215 69.3
Manes.12G011000 Manihot esculenta HOM05D002231 ORTHO05D006103 5.4e-68 261.5 223 67.3
Gorai.002G183300 Gossypium raimondii HOM05D002231 ORTHO05D006103 7.1e-68 261.2 219 66.2
Gohir.A01G160300 Gossypium hirsutum HOM05D002231 ORTHO05D006103 2.1e-67 259.6 219 66.2
Gohir.D01G147100 Gossypium hirsutum HOM05D002231 ORTHO05D006103 2.7e-67 259.2 221 66.1
AUR62028925 Chenopodium quinoa HOM05D002231 ORTHO05D006103 3.5e-67 258.8 210 69.5
Sc11g0000450 Simmondsia chinensis HOM05D002231 ORTHO05D006103 3.5e-67 258.8 224 67.0
RcHm_v2.0_Chr4g0430201 Rosa chinensis HOM05D002231 ORTHO05D006103 4.6e-67 258.5 212 68.9
Rhsim12G0025500 Rhododendron simsii HOM05D002231 ORTHO05D006103 7.8e-67 257.7 257 59.9
Cfa009373 Carpinus fangiana HOM05D002231 ORTHO05D006103 1.3e-66 256.9 214 66.4
Prupe.1G225400 Prunus persica HOM05D002231 ORTHO05D006103 1.3e-66 256.9 212 68.9
EL10Ac6g13507 Beta vulgaris HOM05D002231 ORTHO05D006103 1.7e-66 256.5 210 68.1
Nn3g16455 Nelumbo nucifera HOM05D002231 ORTHO05D006103 5.1e-66 255.0 219 66.7
Thecc.02G207900 Theobroma cacao HOM05D002231 ORTHO05D006103 8.6e-66 254.2 222 64.9
CANSAT01G1083 Cannabis sativa HOM05D002231 ORTHO05D006103 1.1e-65 253.8 219 64.8
Nitab4.5_0000067g0140 Nicotiana tabacum HOM05D002231 ORTHO05D006103 4.3e-65 251.9 241 61.0
MD13G1119600 Malus domestica HOM05D002231 ORTHO05D006103 7.3e-65 251.1 212 65.1
MD16G1119800 Malus domestica HOM05D002231 ORTHO05D006103 1.2e-64 250.4 210 65.2
CiPaw.05G109300 Carya illinoinensis HOM05D002231 ORTHO05D006103 2.1e-64 249.6 215 65.6
Ciclev10032446m.g Citrus clementina HOM05D002231 ORTHO05D006103 4.7e-64 248.4 214 65.0
Duzib251G0325 Durio zibethinus HOM05D002231 ORTHO05D006103 4.7e-64 248.4 228 62.7
CiPaw.06G102900 Carya illinoinensis HOM05D002231 ORTHO05D006103 1.8e-63 246.5 218 65.1
TPR.G17792 Trifolium pratense HOM05D002231 ORTHO05D006103 2.4e-63 246.1 212 64.6
PSO017G2330 Papaver somniferum HOM05D002231 ORTHO05D006103 3.1e-63 245.7 215 64.7
FAN22G0585 Fragaria x ananassa HOM05D002231 ORTHO05D006103 6.8e-63 244.6 214 64.5
Lsat_1_v5_gn_3_31041 Lactuca sativa HOM05D002231 ORTHO05D006103 6.8e-63 244.6 216 60.6
TWI36G0137 Tripterygium wilfordii HOM05D002231 ORTHO05D006103 8.9e-63 244.2 210 66.2
Phvul.001G262200 Phaseolus vulgaris HOM05D002231 ORTHO05D006103 1.5e-62 243.4 168 76.2
FAN17G0493 Fragaria x ananassa HOM05D002231 ORTHO05D005593 2.6e-62 242.7 213 64.3
Glyma.11G250900 Glycine max HOM05D002231 ORTHO05D006103 2.6e-62 242.7 210 65.2
Psat5g096440 Pisum sativum HOM05D002231 ORTHO05D006103 4.4e-62 241.9 218 63.8
Hund25467 Selenicereus undatus HOM05D002231 ORTHO05D006103 4.4e-62 241.9 215 64.7
Lj6g0006303 Lotus japonicus HOM05D002231 ORTHO05D006103 5.8e-62 241.5 148 83.8
Medtr3g085280 Medicago truncatula HOM05D002231 ORTHO05D006103 5.8e-62 241.5 211 64.5
CDE02G1146 Ceratophyllum demersum HOM05D002231 ORTHO05D006103 9.9e-62 240.7 207 65.7
Glyma.18G006100 Glycine max HOM05D002231 ORTHO05D006103 9.9e-62 240.7 210 64.8
Aqoxy5G03366 Aquilegia oxysepala HOM05D002231 ORTHO05D006103 1.3e-61 240.4 214 64.5
SalBow8G1223 Salvia bowleyana HOM05D002231 ORTHO05D006103 1.3e-61 240.4 202 63.9
Lalb_Chr23g0278101 Lupinus albus HOM05D002231 ORTHO05D006103 1.7e-61 240.0 148 81.8
VMungo1383G1118 Vigna mungo HOM05D002231 ORTHO05D006103 1.7e-61 240.0 143 84.6
Eucgr.B03496 Eucalyptus grandis HOM05D002231 ORTHO05D006103 2.2e-61 239.6 235 58.7
Gohir.A04G139800 Gossypium hirsutum HOM05D002231 ORTHO05D006103 2.2e-61 239.6 219 62.1
Potri.003G172000 Populus trichocarpa HOM05D002231 ORTHO05D006103 2.2e-61 239.6 219 62.6
Potri.001G056500 Populus trichocarpa HOM05D002231 ORTHO05D006103 8.4e-61 237.7 215 62.3
Solyc04g045580.4 Solanum lycopersicum HOM05D002231 ORTHO05D006103 1.4e-60 236.9 192 67.2
arahy.Tifrunner.gnm1.ann1.4LX5KX Arachis hypogaea HOM05D002231 ORTHO05D006103 1.9e-60 236.5 211 63.0
arahy.Tifrunner.gnm1.ann1.A5UQ16 Arachis hypogaea HOM05D002231 ORTHO05D006103 1.9e-60 236.5 211 63.0
Sabra03G0125900 Salix brachista HOM05D002231 ORTHO05D005593 5.4e-60 235.0 222 62.2
vmacro01059 Vaccinium macrocarpon HOM05D002231 ORTHO05D006103 5.4e-60 235.0 276 51.8
Manes.13G011701 Manihot esculenta HOM05D002231 ORTHO05D006103 7.1e-60 234.6 200 66.0
ECA234G2919 Erigeron canadensis HOM05D002231 ORTHO05D006103 1.2e-59 233.8 130 89.2
PGR102G0892 Punica granatum HOM05D002231 ORTHO05D006103 1.2e-59 233.8 225 59.6
Lalb_Chr08g0230621 Lupinus albus HOM05D002231 ORTHO05D006103 1.6e-59 233.4 212 62.3
FAN12G0590 Fragaria x ananassa HOM05D002231 ORTHO05D006103 2.1e-59 233.0 237 58.6
Peaxi162Scf00518g00424 Petunia axillaris HOM05D002231 ORTHO05D006103 2.1e-59 233.0 154 79.9
FAN07G0699 Fragaria x ananassa HOM05D002231 ORTHO05D006103 4.6e-59 231.9 236 58.5
Gohir.D04G183000 Gossypium hirsutum HOM05D002231 ORTHO05D006103 7.8e-59 231.1 220 60.0
Gorai.012G176000 Gossypium raimondii HOM05D002231 ORTHO05D006103 7.8e-59 231.1 218 59.6
Sed0020663 Sechium edule HOM05D002231 ORTHO05D006103 1.3e-58 230.3 150 78.7
QL03p052604 Quercus lobata HOM05D002231 ORTHO05D006103 1.7e-58 229.9 264 53.4
Ah.02g130890 Amaranthus hybridus HOM05D002231 ORTHO05D006103 3.0e-58 229.2 210 62.4
CsaV3_5G030240 Cucumis sativus L. HOM05D002231 ORTHO05D006103 3.0e-58 229.2 207 61.8
A09p38550 Brassica napus HOM05D002231 ORTHO05D006103 3.3e-57 225.7 214 60.3
Phvul.L002246 Phaseolus vulgaris HOM05D002231 ORTHO05D006103 4.3e-57 225.3 210 60.0
Sabra01G0040900 Salix brachista HOM05D002231 ORTHO05D006103 5.6e-57 224.9 226 58.8
SalBow2G1775 Salvia bowleyana HOM05D002231 ORTHO05D006103 5.6e-57 224.9 163 72.4
Lj3C1069T6 Lonicera japonica HOM05D002231 ORTHO05D006103 7.3e-57 224.6 200 62.5
BraA09t39361Z Brassica rapa HOM05D002231 ORTHO05D006103 9.6e-57 224.2 212 60.4
A07p11870 Brassica napus HOM05D002231 ORTHO05D006103 1.3e-56 223.8 216 61.6
BolC5t31328H Brassica oleracea HOM05D002231 ORTHO05D006103 3.6e-56 222.2 143 76.9
C07p17810 Brassica napus HOM05D002231 ORTHO05D006103 6.2e-56 221.5 216 61.1
BolC7t42287H Brassica oleracea HOM05D002231 ORTHO05D006103 6.2e-56 221.5 216 61.1
BcaC06g35283 Brassica carinata HOM05D002231 ORTHO05D006103 8.1e-56 221.1 216 61.1
Sp1g23610 Schrenkiella parvula HOM05D002231 ORTHO05D006103 8.1e-56 221.1 213 61.5
Carub.0001s2592 Capsella rubella HOM05D002231 ORTHO05D006103 1.4e-55 220.3 213 59.6
AL1G40790 Arabidopsis lyrata HOM05D002231 ORTHO05D006103 1.8e-55 219.9 213 59.6
BraA07t28971Z Brassica rapa HOM05D002231 ORTHO05D006103 1.8e-55 219.9 216 61.1
THA.LOC104807538 Tarenaya hassleriana HOM05D002231 ORTHO05D006103 3.1e-55 219.2 224 57.1
AT1G27385 Arabidopsis thaliana HOM05D002231 ORTHO05D006103 4.0e-55 218.8 211 59.7
C05p26090 Brassica napus HOM05D002231 ORTHO05D006103 5.3e-55 218.4 209 58.9
CARHR026970 Cardamine hirsuta HOM05D002231 ORTHO05D006103 5.3e-55 218.4 214 60.3
Aa31LG7G9850 Aethionema arabicum HOM05D002231 ORTHO05D006103 6.9e-55 218.0 213 59.2
Glyma.08G104500 Glycine max HOM05D002231 ORTHO05D006103 1.2e-54 217.2 141 78.7
Atru.chr11.2328 Acer truncatum HOM05D002231 ORTHO05D006103 1.5e-54 216.9 202 61.9
TAR629G1028 Trochodendron aralioides HOM05D002231 ORTHO05D006103 1.5e-54 216.9 199 63.3
Thhalv10008813m.g Eutrema salsugineum HOM05D002231 ORTHO05D006103 2.0e-54 216.5 213 59.6
HanXRQChr06g0174651 Helianthus annuus HOM05D002231 ORTHO05D006103 3.4e-54 215.7 204 55.4
TWI18G1086 Tripterygium wilfordii HOM05D002231 ORTHO05D006103 4.4e-54 215.3 196 62.2
MELO3C011862.2 Cucumis melo HOM05D002231 ORTHO05D006103 4.9e-53 211.8 207 58.5
FvH4_4g23720 Fragaria vesca HOM05D002231 ORTHO05D006103 3.2e-52 209.1 196 60.7
Zm00001eb421060 Zea mays HOM05D002231 ORTHO05D006103 7.1e-52 208.0 139 76.3
HanXRQChr12g0385441 Helianthus annuus HOM05D002231 ORTHO05D006103 1.6e-51 206.8 206 58.3
Os04g0386500 Oryza sativa ssp. japonica HOM05D002231 ORTHO05D006103 2.1e-51 206.5 138 76.1
Os02g0507400 Oryza sativa ssp. japonica HOM05D002231 ORTHO05D006103 2.7e-51 206.1 150 68.7
ClCG11G013620 Citrullus lanatus HOM05D002231 ORTHO05D006103 6.0e-51 204.9 149 71.8
Duzib248G1458 Durio zibethinus HOM05D002231 ORTHO05D006103 7.8e-51 204.5 223 56.5
Ca_16456_v3 Cicer arietinum L. HOM05D002231 ORTHO05D006103 1.0e-50 204.1 193 60.1
Cpa.g.sc808.1 Carica papaya HOM05D002231 ORTHO05D006103 2.3e-50 203.0 120 83.3
AUR62005623 Chenopodium quinoa HOM05D002231 ORTHO05D006103 3.0e-50 202.6 211 58.8
ECA246G2515 Erigeron canadensis HOM05D002231 ORTHO05D006103 3.9e-50 202.2 131 73.3
TAR371G0929 Trochodendron aralioides HOM05D005804 ORTHO05D006849 3.9e-50 202.2 190 63.2
MBI11_g05330_MAGBIO Magnolia biondii HOM05D002231 ORTHO05D006103 6.6e-50 201.4 188 62.8
Lj4g0021495 Lotus japonicus HOM05D002231 ORTHO05D006103 1.5e-49 200.3 230 57.0
Oeu049136.1 Olea europaea HOM05D002231 ORTHO05D006103 1.5e-49 200.3 190 59.5
BcaC05g26745 Brassica carinata HOM05D002231 ORTHO05D006103 3.4e-46 189.1 197 58.9
Oeu029193.1 Olea europaea HOM05D002231 ORTHO05D006103 3.4e-46 189.1 168 64.9
HanXRQChr08g0207851 Helianthus annuus HOM05D002231 ORTHO05D006103 1.7e-45 186.8 182 57.1
Zm00001eb085510 Zea mays HOM05D002231 ORTHO05D006103 1.7e-45 186.8 205 53.7
BcaC05g26552 Brassica carinata HOM05D002231 ORTHO05D006103 2.2e-45 186.4 210 53.8
BcaB03g13989 Brassica carinata HOM05D002231 ORTHO05D006103 2.9e-45 186.0 194 57.7
Nn4g22308 Nelumbo nucifera HOM05D002231 ORTHO05D006103 3.8e-45 185.7 177 58.8
Haze_12423 Corylus avellana HOM05D002231 ORTHO05D006103 4.6e-43 178.7 171 59.1
ECA233G1565 Erigeron canadensis HOM05D002231 ORTHO05D006103 7.9e-43 177.9 158 62.7
arahy.Tifrunner.gnm1.ann1.1IJF7J Arachis hypogaea HOM05D002231 ORTHO05D006103 2.3e-42 176.4 210 51.0
SMO364G0411 Selaginella moellendorffii HOM05D002231 ORTHO05D006103 3.9e-42 175.6 137 67.9
COL.COLO4_20407 Corchorus olitorius HOM05D002231 ORTHO05D006103 5.1e-42 175.3 175 58.3
arahy.Tifrunner.gnm1.ann1.RN2E3G Arachis hypogaea HOM05D002231 ORTHO05D006103 1.6e-40 170.2 103 83.5
SMO246G0027 Selaginella moellendorffii HOM05D002231 ORTHO05D006103 6.2e-40 168.3 133 63.9
DCAR_007004 Daucus carota HOM05D002231 ORTHO05D006103 1.4e-39 167.2 120 73.3
Nitab4.5_0004003g0010 Nicotiana tabacum HOM05D002231 ORTHO05D006103 1.8e-39 166.8 163 60.1
Pp3c15_19360 Physcomitrium patens HOM05D002231 ORTHO05D006103 2.4e-39 166.4 137 65.7
AagrBONN_evm.TU.Sc2ySwM_368.423 Anthoceros agrestis HOM05D002231 ORTHO05D006103 3.1e-39 166.0 130 66.9
Nitab4.5_0000155g0190 Nicotiana tabacum HOM05D002231 ORTHO05D006103 1.2e-38 164.1 165 58.8
Pp3c9_19480 Physcomitrium patens HOM05D002231 ORTHO05D006103 1.9e-36 156.8 186 50.0
CBR_g57027 Chara braunii HOM05D002231 ORTHO05D006103 2.5e-36 156.4 138 56.5
DCAR_026462 Daucus carota HOM05D002231 ORTHO05D006103 3.2e-36 156.0 197 51.3
ATR0059G025 Amborella trichopoda HOM05D002231 ORTHO05D006103 1.8e-34 150.2 101 75.2
Lsat_1_v5_gn_4_56001 Lactuca sativa HOM05D002231 ORTHO05D006103 1.0e-26 124.4 181 43.1
PRCOL_00004939 Prasinoderma coloniale HOM05D002231 ORTHO05D006103 2.3e-26 123.2 139 46.8
RcHm_v2.0_Chr3g0491761 Rosa chinensis HOM05D002231 ORTHO05D006103 1.0e-21 107.8 62 85.5
Cre12.g508300 Chlamydomonas reinhardtii HOM05D002231 ORTHO05D006103 2.5e-17 93.2 88 56.8
Cre02.g074700 Chlamydomonas reinhardtii HOM05D002231 ORTHO05D006103 4.8e-16 89.0 167 34.7
TAR383G1026 Trochodendron aralioides HOM05D002231 ORTHO05D006103 4.1e-15 85.9 70 68.6
MCO02G005 Micromonas commoda HOM05D003605 ORTHO05D004292 1.5e-14 84.0 116 38.8
CDE05G2241 Ceratophyllum demersum HOM05D001859 ORTHO05D001836 1.5e-09 67.4 51 66.7
TAR636G2964 Trochodendron aralioides HOM05D002231 ORTHO05D006103 8.2e-08 61.6 35 88.6
C02p58440 Brassica napus HOM05D001393 ORTHO05D032808 4.1e-07 59.3 39 66.7


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