Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold98G29399 Striga asiatica HOM05D007033 ORTHO05D008770 6.8e-78 293.9 145 100.0
Migut.B01441 Erythranthe guttata HOM05D007033 ORTHO05D008770 8.7e-49 197.2 145 64.8
SalBow5G2417 Salvia bowleyana HOM05D007033 ORTHO05D008770 1.1e-43 180.3 106 80.2
Eucgr.E01772 Eucalyptus grandis HOM05D007033 ORTHO05D008770 9.6e-40 167.2 132 61.4
PGR042G3214 Punica granatum HOM05D007033 ORTHO05D008770 2.8e-39 165.6 143 60.1
GSVIVG01011318001 Vitis vinifera HOM05D007033 ORTHO05D008770 3.6e-39 165.2 133 60.2
Ciclev10033075m.g Citrus clementina HOM05D007033 ORTHO05D008770 4.8e-39 164.9 134 61.2
Dinv43975 Davidia involucrata HOM05D007033 ORTHO05D008770 1.4e-38 163.3 137 58.4
Rhsim12G0078100 Rhododendron simsii HOM05D007033 ORTHO05D008770 9.0e-38 160.6 141 58.2
TWI60G0127 Tripterygium wilfordii HOM05D007033 ORTHO05D008770 1.2e-37 160.2 132 59.8
Carub.0006s1585 Capsella rubella HOM05D007033 ORTHO05D008770 1.5e-37 159.8 142 58.5
Cc02_g26390 Coffea canephora HOM05D007033 ORTHO05D008770 1.5e-37 159.8 134 59.7
Hma1.2p1_0353F.1_g133340 Hydrangea macrophylla HOM05D007033 ORTHO05D008770 3.4e-37 158.7 134 59.7
Prupe.2G100000 Prunus persica HOM05D007033 ORTHO05D008770 4.5e-37 158.3 130 60.8
FvH4_7g07210 Fragaria vesca HOM05D007033 ORTHO05D008770 5.8e-37 157.9 140 57.9
Nn3g19225 Nelumbo nucifera HOM05D007033 ORTHO05D008770 5.8e-37 157.9 118 66.1
RcHm_v2.0_Chr1g0337311 Rosa chinensis HOM05D007033 ORTHO05D008770 1.3e-36 156.8 142 57.0
Haze_15805 Corylus avellana HOM05D007033 ORTHO05D008770 1.7e-36 156.4 138 58.0
FAN03G2679 Fragaria x ananassa HOM05D007033 ORTHO05D008770 1.7e-36 156.4 140 57.1
FAN06G3925 Fragaria x ananassa HOM05D007033 ORTHO05D008770 1.7e-36 156.4 140 57.1
THA.LOC104827245 Tarenaya hassleriana HOM05D007033 ORTHO05D008770 2.2e-36 156.0 121 65.3
Actinidia21596 Actinidia chinensis HOM05D007033 ORTHO05D008770 2.9e-36 155.6 123 61.8
arahy.Tifrunner.gnm1.ann1.14YBGE Arachis hypogaea HOM05D007033 ORTHO05D008770 2.9e-36 155.6 134 56.0
arahy.Tifrunner.gnm1.ann1.GIK8C1 Arachis hypogaea HOM05D007033 ORTHO05D008770 2.9e-36 155.6 134 56.0
Potri.013G073100 Populus trichocarpa HOM05D007033 ORTHO05D008770 2.9e-36 155.6 131 57.3
Thecc.05G231700 Theobroma cacao HOM05D007033 ORTHO05D008770 2.9e-36 155.6 136 57.4
Sp6g26610 Schrenkiella parvula HOM05D007033 ORTHO05D008770 4.9e-36 154.8 132 61.4
AL6G28700 Arabidopsis lyrata HOM05D007033 ORTHO05D008770 6.4e-36 154.5 135 60.7
ECA234G3633 Erigeron canadensis HOM05D007033 ORTHO05D008770 6.4e-36 154.5 133 58.6
C02p09210 Brassica napus HOM05D007033 ORTHO05D008770 1.1e-35 153.7 131 61.1
Manes.08G157600 Manihot esculenta HOM05D007033 ORTHO05D008770 1.1e-35 153.7 132 59.1
BcaC03g13530 Brassica carinata HOM05D007033 ORTHO05D008770 1.4e-35 153.3 131 61.1
BolC2t06829H Brassica oleracea HOM05D007033 ORTHO05D008770 1.4e-35 153.3 131 61.1
HanXRQChr03g0088201 Helianthus annuus HOM05D007033 ORTHO05D008770 1.4e-35 153.3 133 58.6
CANSAT35G1406 Cannabis sativa HOM05D007033 ORTHO05D008770 1.9e-35 152.9 135 56.3
Gohir.D13G100400 Gossypium hirsutum HOM05D007033 ORTHO05D008770 1.9e-35 152.9 142 54.2
Gorai.013G112100 Gossypium raimondii HOM05D007033 ORTHO05D008770 1.9e-35 152.9 142 54.2
Aqoxy5G03237 Aquilegia oxysepala HOM05D007033 ORTHO05D008770 2.4e-35 152.5 132 57.6
MD07G1078200 Malus domestica HOM05D007033 ORTHO05D008770 2.4e-35 152.5 140 57.9
AT5G17610 Arabidopsis thaliana HOM05D007033 ORTHO05D008770 3.2e-35 152.1 142 54.9
A02p04360 Brassica napus HOM05D007033 ORTHO05D008770 3.2e-35 152.1 131 60.3
BraA02t05400Z Brassica rapa HOM05D007033 ORTHO05D008770 3.2e-35 152.1 131 60.3
Thhalv10014961m.g Eutrema salsugineum HOM05D007033 ORTHO05D008770 3.2e-35 152.1 132 59.8
Gohir.A13G085300 Gossypium hirsutum HOM05D007033 ORTHO05D008770 4.2e-35 151.8 140 55.7
Lsat_1_v5_gn_4_42281 Lactuca sativa HOM05D007033 ORTHO05D008770 4.2e-35 151.8 136 55.1
PSO063G1631 Papaver somniferum HOM05D007033 ORTHO05D008770 4.2e-35 151.8 136 55.9
TPR.G17361 Trifolium pratense HOM05D007033 ORTHO05D008770 4.2e-35 151.8 141 51.8
PSO782G0028 Papaver somniferum HOM05D007033 ORTHO05D008770 7.1e-35 151.0 133 54.9
MD02G1238400 Malus domestica HOM05D007033 ORTHO05D008770 2.1e-34 149.4 125 60.0
CARHR195570 Cardamine hirsuta HOM05D007033 ORTHO05D008770 2.7e-34 149.1 133 57.9
ClCG05G002970 Citrullus lanatus HOM05D007033 ORTHO05D008770 2.7e-34 149.1 124 58.1
CsaV3_3G010550 Cucumis sativus L. HOM05D007033 ORTHO05D008770 2.7e-34 149.1 124 58.1
EL10Ac1g00673 Beta vulgaris HOM05D007033 ORTHO05D008770 3.5e-34 148.7 124 59.7
CAN.G700.33 Capsicum annuum HOM05D007033 ORTHO05D008770 3.5e-34 148.7 142 52.1
MELO3C006276.2 Cucumis melo HOM05D007033 ORTHO05D008770 3.5e-34 148.7 124 58.1
unitig_8.g3853 Utricularia gibba HOM05D007033 ORTHO05D008770 3.5e-34 148.7 132 56.1
Lj3g0004375 Lotus japonicus HOM05D007033 ORTHO05D008770 7.9e-34 147.5 115 62.6
MBI16_g43713_MAGBIO Magnolia biondii HOM05D007033 ORTHO05D008770 1.0e-33 147.1 108 63.9
Sc23g0004770 Simmondsia chinensis HOM05D007033 ORTHO05D008770 1.0e-33 147.1 104 68.3
COL.COLO4_08541 Corchorus olitorius HOM05D007033 ORTHO05D008770 1.3e-33 146.7 107 66.4
Peaxi162Scf00592g00448 Petunia axillaris HOM05D007033 ORTHO05D008770 1.8e-33 146.4 134 55.2
Phvul.010G038500 Phaseolus vulgaris HOM05D007033 ORTHO05D008770 1.8e-33 146.4 133 54.1
Sed0003013 Sechium edule HOM05D007033 ORTHO05D008770 2.3e-33 146.0 138 53.6
CDE12G0505 Ceratophyllum demersum HOM05D007033 ORTHO05D008770 3.0e-33 145.6 137 56.2
Glyma.03G098200 Glycine max HOM05D007033 ORTHO05D008770 3.0e-33 145.6 133 53.4
Sabra13G0063200 Salix brachista HOM05D007033 ORTHO05D008770 3.9e-33 145.2 97 70.1
Solyc01g081200.3 Solanum lycopersicum HOM05D007033 ORTHO05D008770 3.9e-33 145.2 143 52.4
Lalb_Chr12g0210181 Lupinus albus HOM05D007033 ORTHO05D008770 5.1e-33 144.8 130 53.8
VMungo0331G1478 Vigna mungo HOM05D007033 ORTHO05D008770 5.1e-33 144.8 133 54.9
BcaC04g18775 Brassica carinata HOM05D007033 ORTHO05D008770 6.7e-33 144.4 137 56.9
C09p59560 Brassica napus HOM05D007033 ORTHO05D008770 6.7e-33 144.4 137 56.9
BolC9t58794H Brassica oleracea HOM05D007033 ORTHO05D008770 6.7e-33 144.4 137 56.9
CiPaw.02G048600 Carya illinoinensis HOM05D007033 ORTHO05D008770 6.7e-33 144.4 132 59.1
Sopen01g032780 Solanum pennellii HOM05D007033 ORTHO05D008770 6.7e-33 144.4 143 52.4
PGSC0003DMG400001787 Solanum tuberosum HOM05D007033 ORTHO05D008770 8.7e-33 144.1 143 52.4
vmacro21112 Vaccinium macrocarpon HOM05D007033 ORTHO05D008770 1.5e-32 143.3 108 63.0
Glyma.07G123600 Glycine max HOM05D007033 ORTHO05D008770 2.5e-32 142.5 133 51.9
Nitab4.5_0004800g0080 Nicotiana tabacum HOM05D007033 ORTHO05D008770 3.3e-32 142.1 101 68.3
QL04p052404 Quercus lobata HOM05D007033 ORTHO05D008770 4.3e-32 141.7 89 71.9
MBI16_g43476_MAGBIO Magnolia biondii HOM05D007033 ORTHO05D008770 9.6e-32 140.6 78 79.5
Nitab4.5_0004594g0020 Nicotiana tabacum HOM05D007033 ORTHO05D008770 1.6e-31 139.8 101 67.3
Sed0002871 Sechium edule HOM05D007033 ORTHO05D008770 2.8e-31 139.0 135 51.1
HPP92_003404 Vanilla planifolia HOM05D007033 ORTHO05D008770 3.7e-31 138.7 126 56.3
HPP92_003427 Vanilla planifolia HOM05D007033 ORTHO05D008770 3.7e-31 138.7 126 56.3
Hund17162 Selenicereus undatus HOM05D007033 ORTHO05D008770 1.4e-30 136.7 89 66.3
Cfa003682 Carpinus fangiana HOM05D007033 ORTHO05D008770 3.1e-30 135.6 156 49.4
AUR62014520 Chenopodium quinoa HOM05D007033 ORTHO05D008770 3.1e-30 135.6 98 67.3
Zm00001eb009070 Zea mays HOM05D007033 ORTHO05D008770 3.1e-30 135.6 133 51.1
AUR62038014 Chenopodium quinoa HOM05D007033 ORTHO05D008770 2.6e-29 132.5 98 66.3
Psat4g215800 Pisum sativum HOM05D007033 ORTHO05D008770 1.3e-28 130.2 96 65.6
BraA10t44240Z Brassica rapa HOM05D007033 ORTHO05D008770 6.4e-28 127.9 91 67.0
Sc23g0004660 Simmondsia chinensis HOM05D007033 ORTHO05D008770 1.9e-27 126.3 107 60.7
SEGI_14041 Sequoiadendron giganteum HOM05D007033 ORTHO05D008770 9.3e-27 124.0 99 60.6
Ah.05g177250 Amaranthus hybridus HOM05D007033 ORTHO05D008770 7.9e-26 120.9 99 61.6
ATR0829G185 Amborella trichopoda HOM05D007033 ORTHO05D008770 1.0e-25 120.6 77 68.8
HPP92_025932 Vanilla planifolia HOM05D007033 ORTHO05D008770 3.9e-25 118.6 107 57.0
AagrBONN_evm.TU.Sc2ySwM_368.1536 Anthoceros agrestis HOM05D007033 ORTHO05D008770 1.2e-21 107.1 110 45.5
A10p21800 Brassica napus HOM05D007033 ORTHO05D008770 2.2e-20 102.8 52 84.6
TAR629G3499 Trochodendron aralioides HOM05D007033 ORTHO05D008770 2.9e-20 102.4 53 84.9
Mapoly0058s0110 Marchantia polymorpha HOM05D007033 ORTHO05D008770 6.5e-20 101.3 104 44.2
Pp3c19_9960 Physcomitrium patens HOM05D007033 ORTHO05D008770 1.4e-19 100.1 95 47.4
SMO351G0381 Selaginella moellendorffii HOM05D007033 ORTHO05D008770 7.1e-19 97.8 97 49.5
Pp3c18_1710 Physcomitrium patens HOM05D007033 ORTHO05D008770 3.0e-17 92.4 74 52.7
Pp3c7_5640 Physcomitrium patens HOM05D007033 ORTHO05D008770 3.0e-17 92.4 66 54.5
Atru.chr2.1689 Acer truncatum HOM05D007033 ORTHO05D008770 1.8e-14 83.2 44 79.5
Sopen05g015510 Solanum pennellii HOM05D007033 ORTHO05D008770 8.5e-12 74.3 40 77.5
MCO10G230 Micromonas commoda HOM05D007033 ORTHO05D008770 1.5e-08 63.5 106 32.1
PRCOL_00006026 Prasinoderma coloniale HOM05D007033 ORTHO05D008770 4.8e-07 58.5 80 37.5


User provided reference genes

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