Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold98G29380 Striga asiatica HOM05D010623 ORTHO05D012718 5.4e-273 943.7 475 100.0
Oeu060696.1 Olea europaea HOM05D010623 ORTHO05D012718 1.2e-118 431.0 566 46.3
Migut.B01424 Erythranthe guttata HOM05D010623 ORTHO05D012718 3.0e-114 416.4 664 43.2
Nitab4.5_0006512g0040 Nicotiana tabacum HOM05D010623 ORTHO05D012718 6.9e-71 272.3 315 50.8
Peaxi162Scf01343g00112 Petunia axillaris HOM05D010623 ORTHO05D012718 2.6e-70 270.4 332 50.0
CAN.G1918.1 Capsicum annuum HOM05D010623 ORTHO05D012718 2.1e-67 260.8 317 49.5
vmacro13591 Vaccinium macrocarpon HOM05D010623 ORTHO05D012718 7.9e-67 258.8 454 41.2
DCAR_025007 Daucus carota HOM05D010623 ORTHO05D012718 2.6e-65 253.8 485 38.6
Nitab4.5_0000507g0020 Nicotiana tabacum HOM05D010623 ORTHO05D012718 9.7e-65 251.9 473 40.4
PGSC0003DMG400025202 Solanum tuberosum HOM05D010623 ORTHO05D012718 2.6e-62 243.8 350 46.0
Rhsim07G0046900 Rhododendron simsii HOM05D010623 ORTHO05D012718 3.8e-61 240.0 417 40.5
Sopen08g013570 Solanum pennellii HOM05D010623 ORTHO05D012718 4.7e-59 233.0 322 45.3
Solyc08g044390.1 Solanum lycopersicum HOM05D010623 ORTHO05D012718 8.0e-59 232.3 321 44.2
Dinv43969 Davidia involucrata HOM05D010623 ORTHO05D012718 5.7e-57 226.1 312 42.6
Lj7P559T50 Lonicera japonica HOM05D010623 ORTHO05D012718 1.2e-51 208.4 422 36.5
Nn3g19189 Nelumbo nucifera HOM05D010623 ORTHO05D012718 2.4e-47 194.1 369 37.9
Nn1g09223 Nelumbo nucifera HOM05D010623 ORTHO05D012718 1.3e-45 188.3 379 37.5
Actinidia31739 Actinidia chinensis HOM05D010623 ORTHO05D012718 4.3e-28 130.2 205 42.0
Actinidia10538 Actinidia chinensis HOM05D010623 ORTHO05D012718 2.0e-22 111.3 198 38.4
Oeu042642.1 Olea europaea HOM05D000154 ORTHO05D000092 4.4e-17 93.6 78 60.3
Rhsim09G0083400 Rhododendron simsii HOM05D006072 ORTHO05D007363 2.2e-16 91.3 353 30.3
DCAR_023269 Daucus carota HOM05D006072 ORTHO05D007363 1.3e-13 82.0 373 27.3
Nitab4.5_0000876g0020 Nicotiana tabacum HOM05D006072 ORTHO05D007363 1.7e-13 81.6 326 27.3
GSVIVG01011570001 Vitis vinifera HOM05D006072 ORTHO05D007363 5.1e-13 80.1 301 27.6
Duzib147G1157 Durio zibethinus HOM05D006072 ORTHO05D007363 6.6e-13 79.7 320 27.2
TAR622G0191 Trochodendron aralioides HOM05D006072 ORTHO05D007363 6.6e-13 79.7 334 27.5
Sopen09g027060 Solanum pennellii HOM05D006072 ORTHO05D007363 1.1e-12 79.0 349 29.8
PGSC0003DMG400019330 Solanum tuberosum HOM05D006072 ORTHO05D007363 2.5e-12 77.8 352 30.4
CAN.G3.7 Capsicum annuum HOM05D006072 ORTHO05D007363 7.3e-12 76.3 384 27.9
Cfa002714 Carpinus fangiana HOM05D006072 ORTHO05D007363 7.3e-12 76.3 333 28.2
Lsat_1_v5_gn_3_92501 Lactuca sativa HOM05D006072 ORTHO05D007363 7.3e-12 76.3 297 27.9
Solyc10g051090.3 Solanum lycopersicum HOM05D006072 ORTHO05D007363 7.3e-12 76.3 319 27.6
Thecc.01G107000 Theobroma cacao HOM05D006072 ORTHO05D007363 7.3e-12 76.3 336 26.5
Nn3g18504 Nelumbo nucifera HOM05D006072 ORTHO05D007363 9.5e-12 75.9 336 27.1
Duzib187G0709 Durio zibethinus HOM05D006072 ORTHO05D007363 1.2e-11 75.5 358 26.0
TAR629G3443 Trochodendron aralioides HOM05D006072 ORTHO05D007363 1.6e-11 75.1 330 27.3
Ciclev10025690m.g Citrus clementina HOM05D006072 ORTHO05D007363 2.1e-11 74.7 321 27.1
Gohir.D12G095100 Gossypium hirsutum HOM05D006072 ORTHO05D007363 2.1e-11 74.7 339 25.4
CSS0004323 Camellia sinensis var. sinensis HOM05D006072 ORTHO05D007363 2.8e-11 74.3 297 31.6
Cc02_g18000 Coffea canephora HOM05D006072 ORTHO05D007363 2.8e-11 74.3 344 26.7
Haze_24990 Corylus avellana HOM05D006072 ORTHO05D007363 2.8e-11 74.3 336 27.7
MBI19_g02922_MAGBIO Magnolia biondii HOM05D006072 ORTHO05D007363 2.8e-11 74.3 329 25.2
Lalb_Chr07g0184981 Lupinus albus HOM05D006072 ORTHO05D007363 3.6e-11 73.9 327 26.6
Lalb_Chr12g0203671 Lupinus albus HOM05D006072 ORTHO05D007363 3.6e-11 73.9 351 27.1
Atru.chr4.239 Acer truncatum HOM05D006072 ORTHO05D007363 4.7e-11 73.6 319 27.3
Medtr8g092370 Medicago truncatula HOM05D006072 ORTHO05D007363 8.1e-11 72.8 331 26.3
Medtr8g092700 Medicago truncatula HOM05D006072 ORTHO05D007363 8.1e-11 72.8 331 26.3
Peaxi162Scf00003g00145 Petunia axillaris HOM05D006072 ORTHO05D007363 8.1e-11 72.8 311 28.0
Rhsim13G0107200 Rhododendron simsii HOM05D006072 ORTHO05D007363 8.1e-11 72.8 314 29.9
Sopen10g022790 Solanum pennellii HOM05D006072 ORTHO05D007363 8.1e-11 72.8 352 27.0
Actinidia24189 Actinidia chinensis HOM05D006072 ORTHO05D007363 1.1e-10 72.4 296 30.7
Hma1.2p1_0523F.1_g172190 Hydrangea macrophylla HOM05D006072 ORTHO05D007363 1.1e-10 72.4 290 28.3
Sabra07G0072700 Salix brachista HOM05D006072 ORTHO05D007363 1.4e-10 72.0 326 27.0
TPR.G2161 Trifolium pratense HOM05D006072 ORTHO05D007363 1.4e-10 72.0 331 26.6
Potri.005G079500 Populus trichocarpa HOM05D006072 ORTHO05D007363 1.8e-10 71.6 333 26.4
Ca_17713_v3 Cicer arietinum L. HOM05D006072 ORTHO05D007363 2.3e-10 71.2 367 27.2
Glyma.08G139000 Glycine max HOM05D006072 ORTHO05D007363 2.3e-10 71.2 325 26.8
HanXRQChr08g0212641 Helianthus annuus HOM05D002727 ORTHO05D002856 2.3e-10 71.2 352 25.3
QL06p050421 Quercus lobata HOM05D006072 ORTHO05D007363 2.3e-10 71.2 334 25.1
SGA_v2.0_scaffold55G19813 Striga asiatica HOM05D006072 ORTHO05D007363 2.3e-10 71.2 322 26.4
GSVIVG01011560001 Vitis vinifera HOM05D006072 ORTHO05D007363 2.3e-10 71.2 334 25.1
CAN.G1.46 Capsicum annuum HOM05D006072 ORTHO05D007363 3.1e-10 70.9 331 26.0
Cc01_g19360 Coffea canephora HOM05D006072 ORTHO05D007363 3.1e-10 70.9 308 28.6
ECA246G2885 Erigeron canadensis HOM05D006072 ORTHO05D007363 3.1e-10 70.9 301 26.2
Migut.N01215 Erythranthe guttata HOM05D006072 ORTHO05D007363 3.1e-10 70.9 335 26.6
Medtr8g091400 Medicago truncatula HOM05D006072 ORTHO05D007363 3.1e-10 70.9 341 26.4
Peaxi162Scf00003g00149 Petunia axillaris HOM05D006072 ORTHO05D007363 3.1e-10 70.9 288 27.8
Gohir.A11G199500 Gossypium hirsutum HOM05D006072 ORTHO05D007363 5.2e-10 70.1 318 25.8
Gorai.008G103500 Gossypium raimondii HOM05D006072 ORTHO05D007363 1.2e-09 68.9 339 24.8
Oeu007228.1 Olea europaea HOM05D006072 ORTHO05D007363 1.2e-09 68.9 322 25.5
Cpa.g.sc131.23 Carica papaya HOM05D006072 ORTHO05D007363 1.5e-09 68.6 352 26.7
Medtr4g075230 Medicago truncatula HOM05D006072 ORTHO05D007363 1.5e-09 68.6 344 26.7
CiPaw.03G138500 Carya illinoinensis HOM05D006072 ORTHO05D007363 2.0e-09 68.2 370 24.9
Gohir.A12G093200 Gossypium hirsutum HOM05D006072 ORTHO05D007363 2.0e-09 68.2 341 25.8
Oeu025733.1 Olea europaea HOM05D006072 ORTHO05D007363 2.0e-09 68.2 317 26.5
Psat7g053120 Pisum sativum HOM05D006072 ORTHO05D007363 2.0e-09 68.2 338 25.1
Manes.12G138600 Manihot esculenta HOM05D006072 ORTHO05D007363 2.6e-09 67.8 320 28.1
Dinv12556 Davidia involucrata HOM05D006072 ORTHO05D007363 3.4e-09 67.4 208 28.8
Gorai.007G241900 Gossypium raimondii HOM05D006072 ORTHO05D007363 3.4e-09 67.4 318 25.2
CANSAT01G0770 Cannabis sativa HOM05D006072 ORTHO05D007363 4.4e-09 67.0 382 26.7
Nitab4.5_0006309g0060 Nicotiana tabacum HOM05D006072 ORTHO05D007363 4.4e-09 67.0 315 27.6
Phvul.002G262300 Phaseolus vulgaris HOM05D006072 ORTHO05D007363 4.4e-09 67.0 379 25.9
Gohir.D11G224600 Gossypium hirsutum HOM05D006072 ORTHO05D007363 5.8e-09 66.6 318 25.2
MELO3C012299.2 Cucumis melo HOM05D002727 ORTHO05D002856 9.9e-09 65.9 296 27.0
FAN06G2836 Fragaria x ananassa HOM05D002727 ORTHO05D002856 9.9e-09 65.9 324 26.2
SalBow3G0772 Salvia bowleyana HOM05D006072 ORTHO05D007363 1.3e-08 65.5 315 28.3
SGA_v2.0_scaffold10G05347 Striga asiatica HOM05D007205 ORTHO05D009175 1.3e-08 65.5 347 27.4
Ah.14g079240 Amaranthus hybridus HOM05D006072 ORTHO05D007363 1.7e-08 65.1 238 23.5
Glyma.05G181300 Glycine max HOM05D006072 ORTHO05D007363 1.7e-08 65.1 322 25.2
Lj4g0019082 Lotus japonicus HOM05D006072 ORTHO05D007363 1.7e-08 65.1 340 26.8
ClCG05G022230 Citrullus lanatus HOM05D002727 ORTHO05D002856 2.2e-08 64.7 333 25.8
Rhsim09G0083300 Rhododendron simsii HOM05D006072 ORTHO05D007363 2.2e-08 64.7 345 29.0
Nitab4.5_0004318g0070 Nicotiana tabacum HOM05D006072 ORTHO05D007363 2.9e-08 64.3 353 26.9
Peaxi162Scf00641g00039 Petunia axillaris HOM05D006072 ORTHO05D007363 2.9e-08 64.3 300 26.3
TPR.G4843 Trifolium pratense HOM05D002727 ORTHO05D002856 2.9e-08 64.3 259 28.6
GSVIVG01011561001 Vitis vinifera HOM05D006072 ORTHO05D007363 2.9e-08 64.3 311 25.7
vmacro10627 Vaccinium macrocarpon HOM05D002727 ORTHO05D002856 3.7e-08 63.9 356 27.0
AUR62003481 Chenopodium quinoa HOM05D006072 ORTHO05D007363 4.9e-08 63.5 186 25.3
CSS0011017 Camellia sinensis var. sinensis HOM05D006072 ORTHO05D007363 6.4e-08 63.2 287 25.8
VMungo0251G2066 Vigna mungo HOM05D006072 ORTHO05D007363 8.3e-08 62.8 344 25.6
CsaV3_5G034890 Cucumis sativus L. HOM05D002727 ORTHO05D002856 1.4e-07 62.0 305 26.9
Lsat_1_v5_gn_5_36701 Lactuca sativa HOM05D006072 ORTHO05D007363 1.9e-07 61.6 279 26.9
Dinv07032 Davidia involucrata HOM05D006072 ORTHO05D007363 2.4e-07 61.2 292 27.1
Sc18g0004880 Simmondsia chinensis HOM05D006072 ORTHO05D007363 2.4e-07 61.2 313 25.2
Ah.09g224330 Amaranthus hybridus HOM05D006072 ORTHO05D007363 5.4e-07 60.1 282 25.5
EL10Ac1g00741 Beta vulgaris HOM05D006072 ORTHO05D007363 1.2e-06 58.9 218 24.3
SalBow4G0595 Salvia bowleyana HOM05D006072 ORTHO05D007363 1.2e-06 58.9 305 26.9
AUR62015493 Chenopodium quinoa HOM05D006072 ORTHO05D007363 3.5e-06 57.4 208 24.5


User provided reference genes

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