Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold98G29375 Striga asiatica HOM05D006927 ORTHO05D009065 0.0e+00 1185.6 582 100.0
SalBow5G1207 Salvia bowleyana HOM05D006927 ORTHO05D009065 7.8e-125 451.8 316 69.9
Migut.B01420 Erythranthe guttata HOM05D006927 ORTHO05D009065 1.1e-118 431.4 273 74.7
Nitab4.5_0000792g0130 Nicotiana tabacum HOM05D006927 ORTHO05D009065 4.8e-114 416.0 314 65.0
Prupe.2G106800 Prunus persica HOM05D006927 ORTHO05D009065 5.3e-113 412.5 290 69.3
Nitab4.5_0006785g0060 Nicotiana tabacum HOM05D006927 ORTHO05D009065 9.0e-113 411.8 313 65.2
Cc02_g26470 Coffea canephora HOM05D006927 ORTHO05D009065 2.0e-112 410.6 281 70.8
Potri.013G070700 Populus trichocarpa HOM05D006927 ORTHO05D009065 2.0e-112 410.6 303 66.7
Cpa.g.sc73.27 Carica papaya HOM05D006927 ORTHO05D009065 4.5e-112 409.5 313 65.5
Dinv43961 Davidia involucrata HOM05D006927 ORTHO05D009065 2.9e-111 406.8 323 64.1
MD07G1081500 Malus domestica HOM05D006927 ORTHO05D009065 2.9e-111 406.8 286 70.3
TAR629G3441 Trochodendron aralioides HOM05D006927 ORTHO05D009065 4.9e-111 406.0 312 64.7
DCAR_001906 Daucus carota HOM05D006927 ORTHO05D009065 2.4e-110 403.7 287 67.9
Manes.09G133500 Manihot esculenta HOM05D006927 ORTHO05D009065 4.2e-110 402.9 294 67.3
GSVIVG01019324001 Vitis vinifera HOM05D006927 ORTHO05D009065 5.4e-110 402.5 280 68.9
Lj9A617T58 Lonicera japonica HOM05D006927 ORTHO05D009065 7.1e-110 402.1 271 70.8
CSS0044270 Camellia sinensis var. sinensis HOM05D006927 ORTHO05D009065 9.3e-110 401.7 277 70.0
CSS0031880 Camellia sinensis var. sinensis HOM05D006927 ORTHO05D009065 2.1e-109 400.6 277 69.7
RcHm_v2.0_Chr1g0340711 Rosa chinensis HOM05D006927 ORTHO05D009065 2.7e-109 400.2 286 68.5
FAN03G0521 Fragaria x ananassa HOM05D006927 ORTHO05D009065 3.5e-109 399.8 288 67.7
QL04p053394 Quercus lobata HOM05D006927 ORTHO05D009065 4.6e-109 399.4 292 68.5
Lsat_1_v5_gn_1_89341 Lactuca sativa HOM05D006927 ORTHO05D009065 6.0e-109 399.1 317 64.4
Solyc01g081480.3 Solanum lycopersicum HOM05D006927 ORTHO05D009065 6.0e-109 399.1 281 68.7
ATR0568G108 Amborella trichopoda HOM05D006927 ORTHO05D009065 7.9e-109 398.7 273 69.2
Gorai.007G250200 Gossypium raimondii HOM05D006927 ORTHO05D009065 1.0e-108 398.3 299 65.6
Peaxi162Scf00907g00025 Petunia axillaris HOM05D006927 ORTHO05D009065 1.8e-108 397.5 290 65.9
Sopen01g033040 Solanum pennellii HOM05D006927 ORTHO05D009065 3.0e-108 396.7 281 68.3
Thecc.05G234500 Theobroma cacao HOM05D006927 ORTHO05D009065 3.0e-108 396.7 280 69.6
FvH4_7g08340 Fragaria vesca HOM05D006927 ORTHO05D009065 3.9e-108 396.4 288 67.0
FAN10G1940 Fragaria x ananassa HOM05D006927 ORTHO05D009065 3.9e-108 396.4 296 65.5
Duzib177G0162 Durio zibethinus HOM05D006927 ORTHO05D009065 1.5e-107 394.4 292 66.8
Eucgr.D01080 Eucalyptus grandis HOM05D006927 ORTHO05D009065 1.5e-107 394.4 277 70.0
Gohir.A11G224222 Gossypium hirsutum HOM05D006927 ORTHO05D009065 1.5e-107 394.4 289 66.8
PGSC0003DMG400031110 Solanum tuberosum HOM05D006927 ORTHO05D009065 4.3e-107 392.9 281 67.3
PGR083G0610 Punica granatum HOM05D006927 ORTHO05D009065 9.6e-107 391.7 272 70.2
Rhsim07G0047700 Rhododendron simsii HOM05D006927 ORTHO05D009065 9.6e-107 391.7 342 60.8
Haze_15787 Corylus avellana HOM05D006927 ORTHO05D009065 3.7e-106 389.8 306 63.7
MBI04_g06278_MAGBIO Magnolia biondii HOM05D006927 ORTHO05D009065 3.7e-106 389.8 280 65.7
TWI34G1327 Tripterygium wilfordii HOM05D006927 ORTHO05D009065 4.8e-106 389.4 293 65.5
Ciclev10032190m.g Citrus clementina HOM05D006927 ORTHO05D009065 1.4e-105 387.9 313 62.3
CAN.G992.25 Capsicum annuum HOM05D006927 ORTHO05D009065 4.0e-105 386.3 296 64.9
Lj1g0006598 Lotus japonicus HOM05D006927 ORTHO05D009065 9.0e-105 385.2 285 66.0
THA.LOC104820815 Tarenaya hassleriana HOM05D006927 ORTHO05D009065 1.2e-104 384.8 287 65.5
CsaV3_6G006390 Cucumis sativus L. HOM05D006927 ORTHO05D009065 2.6e-104 383.6 299 63.9
FAN06G3009 Fragaria x ananassa HOM05D006927 ORTHO05D009065 2.6e-104 383.6 306 62.7
HanXRQChr01g0018481 Helianthus annuus HOM05D006927 ORTHO05D009065 3.4e-104 383.3 289 67.1
AT5G17670 Arabidopsis thaliana HOM05D006927 ORTHO05D009065 1.7e-103 380.9 293 64.5
MELO3C022480.2 Cucumis melo HOM05D006927 ORTHO05D009065 1.7e-103 380.9 299 62.9
AL6G28760 Arabidopsis lyrata HOM05D006927 ORTHO05D009065 6.4e-103 379.0 297 63.0
Aqoxy1G00986 Aquilegia oxysepala HOM05D006927 ORTHO05D009065 1.9e-102 377.5 304 61.5
Sp6g26550 Schrenkiella parvula HOM05D006927 ORTHO05D009065 1.9e-102 377.5 313 61.3
Sed0018978 Sechium edule HOM05D006927 ORTHO05D009065 5.5e-102 375.9 298 62.1
Thhalv10014137m.g Eutrema salsugineum HOM05D006927 ORTHO05D009065 2.7e-101 373.6 313 60.7
Zm00001eb208940 Zea mays HOM05D006927 ORTHO05D009065 3.5e-101 373.2 298 63.4
Medtr3g118320 Medicago truncatula HOM05D006927 ORTHO05D009065 4.6e-101 372.9 296 63.2
BcaC03g13532 Brassica carinata HOM05D006927 ORTHO05D009065 6.0e-101 372.5 308 60.4
Carub.0006s1591 Capsella rubella HOM05D006927 ORTHO05D009065 1.0e-100 371.7 307 61.2
Atru.chr2.1634 Acer truncatum HOM05D006927 ORTHO05D009065 1.8e-100 370.9 321 59.5
VMungo0251G3349 Vigna mungo HOM05D006927 ORTHO05D009065 2.3e-100 370.5 294 63.3
ECA248G1152 Erigeron canadensis HOM05D006927 ORTHO05D009065 3.0e-100 370.2 282 62.8
Os02g0129900 Oryza sativa ssp. japonica HOM05D006927 ORTHO05D009065 3.0e-100 370.2 283 65.4
Glyma.06G001500 Glycine max HOM05D006927 ORTHO05D009065 6.7e-100 369.0 289 64.0
Sc11g0005590 Simmondsia chinensis HOM05D006927 ORTHO05D009065 6.7e-100 369.0 286 61.9
arahy.Tifrunner.gnm1.ann1.DTN3WJ Arachis hypogaea HOM05D006927 ORTHO05D009065 1.1e-99 368.2 288 63.2
C02p09230 Brassica napus HOM05D006927 ORTHO05D009065 1.3e-98 364.8 312 59.3
arahy.Tifrunner.gnm1.ann1.A7PVHI Arachis hypogaea HOM05D006927 ORTHO05D009065 3.7e-98 363.2 319 59.9
A02p04400 Brassica napus HOM05D006927 ORTHO05D009065 3.7e-98 363.2 315 58.4
Ca_15418_v3 Cicer arietinum L. HOM05D006927 ORTHO05D009065 1.4e-97 361.3 283 64.3
Phvul.002G317100 Phaseolus vulgaris HOM05D006927 ORTHO05D009065 1.4e-97 361.3 290 62.1
TPR.G38566 Trifolium pratense HOM05D006927 ORTHO05D009065 1.4e-97 361.3 290 63.8
vmacro13598 Vaccinium macrocarpon HOM05D006927 ORTHO05D009065 1.4e-97 361.3 395 51.1
Ah.16g104050 Amaranthus hybridus HOM05D006927 ORTHO05D009065 2.4e-97 360.5 310 59.0
PSO675G5316 Papaver somniferum HOM05D006927 ORTHO05D009065 3.1e-97 360.1 316 58.9
ClCG06G000620 Citrullus lanatus HOM05D006927 ORTHO05D009065 5.8e-96 355.9 319 57.7
Aa31LG11G11960 Aethionema arabicum HOM05D006927 ORTHO05D009065 1.3e-95 354.8 326 57.7
CANSAT25G2771 Cannabis sativa HOM05D006927 ORTHO05D009065 5.5e-94 349.4 284 59.2
COL.COLO4_21417 Corchorus olitorius HOM05D006927 ORTHO05D009065 1.2e-93 348.2 271 64.6
CDE02G0279 Ceratophyllum demersum HOM05D006927 ORTHO05D009065 6.0e-93 345.9 295 56.9
Sabra13G0061600 Salix brachista HOM05D006927 ORTHO05D009065 3.4e-88 330.1 298 56.7
MD02G1231900 Malus domestica HOM05D006927 ORTHO05D009065 1.0e-87 328.6 249 67.1
Lalb_Chr08g0246751 Lupinus albus HOM05D006927 ORTHO05D009065 9.3e-86 322.0 288 56.2
FAN01G0804 Fragaria x ananassa HOM05D006927 ORTHO05D009065 3.6e-85 320.1 282 59.2
AagrBONN_evm.TU.Sc2ySwM_228.4179 Anthoceros agrestis HOM05D006927 ORTHO05D009065 8.8e-84 315.5 285 55.4
Pp3c20_10810 Physcomitrium patens HOM05D006927 ORTHO05D009065 1.9e-83 314.3 286 53.8
Mapoly0110s0034 Marchantia polymorpha HOM05D006927 ORTHO05D009065 5.9e-80 302.8 293 53.2
SMO141G0137 Selaginella moellendorffii HOM05D006927 ORTHO05D009065 3.0e-76 290.4 276 54.3
Psat5g000960 Pisum sativum HOM05D006927 ORTHO05D009065 5.5e-70 269.6 255 56.9
Oeu034881.1 Olea europaea HOM05D006927 ORTHO05D009065 4.4e-67 260.0 170 72.4
Nn1g09344 Nelumbo nucifera HOM05D006927 ORTHO05D009065 8.5e-63 245.7 163 69.3
Actinidia31733 Actinidia chinensis HOM05D006927 ORTHO05D009065 3.2e-62 243.8 179 67.0
MCO09G674 Micromonas commoda HOM05D006927 ORTHO05D009065 1.6e-61 241.5 267 43.8
Dinv43521 Davidia involucrata HOM05D006927 ORTHO05D009065 4.7e-61 240.0 181 65.2
Aqoxy116s007 Aquilegia oxysepala HOM05D006927 ORTHO05D009065 5.2e-60 236.5 303 47.5
Cre07.g313550 Chlamydomonas reinhardtii HOM05D006927 ORTHO05D009065 6.7e-60 236.1 272 45.6
CiPaw.02G047300 Carya illinoinensis HOM05D006927 ORTHO05D009065 8.8e-60 235.7 167 68.3
BolC2t06832H Brassica oleracea HOM05D006927 ORTHO05D009065 5.7e-59 233.0 193 61.1
BraA02t05404Z Brassica rapa HOM05D006927 ORTHO05D009065 6.3e-58 229.6 193 60.6
HPP92_025548 Vanilla planifolia HOM05D006927 ORTHO05D009065 1.6e-56 224.9 174 60.3
CARHR195510 Cardamine hirsuta HOM05D006927 ORTHO05D009065 1.5e-51 208.4 159 63.5
PRCOL_00002784 Prasinoderma coloniale HOM05D006927 ORTHO05D009065 4.8e-50 203.4 293 41.0
unitig_26.g8847 Utricularia gibba HOM05D006927 ORTHO05D009065 6.5e-47 193.0 155 63.2
Gohir.D11G237100 Gossypium hirsutum HOM05D006927 ORTHO05D009065 5.7e-43 179.9 132 65.9
unitig_26.g8846 Utricularia gibba HOM05D006927 ORTHO05D009065 4.6e-32 143.7 89 70.8
Actinidia34774 Actinidia chinensis HOM05D006927 ORTHO05D009065 8.9e-28 129.4 81 71.6
MCO02G275 Micromonas commoda HOM05D006927 ORTHO05D044296 1.9e-25 121.7 309 32.7
Thecc.05G234900 Theobroma cacao HOM05D006927 ORTHO05D009065 2.4e-25 121.3 62 85.5
PRCOL_00000683 Prasinoderma coloniale HOM05D006927 ORTHO05D009065 1.3e-23 115.5 281 32.0
SEGI_38351 Sequoiadendron giganteum HOM05D006927 ORTHO05D009065 7.3e-22 109.8 69 68.1
BcaB08g36753 Brassica carinata HOM05D006927 ORTHO05D009065 9.5e-22 109.4 135 45.2
Cre01.g025150 Chlamydomonas reinhardtii HOM05D006927 ORTHO05D044296 3.4e-19 100.9 316 26.6
HPP92_025520 Vanilla planifolia HOM05D006927 ORTHO05D009065 3.9e-15 87.4 148 40.5
AagrBONN_evm.TU.Sc2ySwM_368.1936 Anthoceros agrestis HOM05D006927 ORTHO05D071668 3.8e-10 70.9 224 26.8
CBR_g4745 Chara braunii HOM05D000019 ORTHO05D000002 1.4e-09 68.9 68 44.1
PRCOL_00002844 Prasinoderma coloniale HOM05D006927 ORTHO05D049054 8.7e-07 59.7 103 39.8


User provided reference genes

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