Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold98G29360 Striga asiatica HOM05D002002 ORTHO05D008797 0.0e+00 1177.2 591 100.0
SGA_v2.0_scaffold476G52131 Striga asiatica HOM05D002002 ORTHO05D008797 3.4e-253 878.2 442 99.8
Migut.K00597 Erythranthe guttata HOM05D002002 ORTHO05D008797 1.5e-123 447.6 521 54.9
SalBow2G1965 Salvia bowleyana HOM05D002002 ORTHO05D008797 3.2e-110 403.3 437 56.3
Oeu059906.4 Olea europaea HOM05D002002 ORTHO05D008797 2.0e-91 340.9 571 45.0
Dinv24786 Davidia involucrata HOM05D002002 ORTHO05D008797 2.1e-85 320.9 576 43.1
Dinv15235 Davidia involucrata HOM05D002002 ORTHO05D008797 1.9e-81 307.8 455 47.5
Actinidia15094 Actinidia chinensis HOM05D002002 ORTHO05D008797 1.0e-71 275.4 471 43.5
Oeu029877.3 Olea europaea HOM05D002002 ORTHO05D008797 5.1e-71 273.1 346 53.8
GSVIVG01005756001 Vitis vinifera HOM05D002002 ORTHO05D008797 6.6e-71 272.7 460 44.1
Peaxi162Scf00128g00134 Petunia axillaris HOM05D002002 ORTHO05D008797 2.5e-70 270.8 415 46.3
Nitab4.5_0000007g0090 Nicotiana tabacum HOM05D002002 ORTHO05D008797 5.6e-70 269.6 432 44.4
CAN.G832.3 Capsicum annuum HOM05D002002 ORTHO05D008797 1.6e-69 268.1 418 44.5
Nitab4.5_0009240g0010 Nicotiana tabacum HOM05D002002 ORTHO05D008797 8.1e-69 265.8 461 43.4
Sopen05g008360 Solanum pennellii HOM05D002002 ORTHO05D008797 1.3e-66 258.5 441 44.4
Manes.13G024600 Manihot esculenta HOM05D002002 ORTHO05D008797 1.7e-66 258.1 418 43.1
Thecc.02G259600 Theobroma cacao HOM05D002002 ORTHO05D008797 8.4e-66 255.8 498 40.0
Ciclev10030634m.g Citrus clementina HOM05D002002 ORTHO05D008797 1.2e-61 241.9 461 41.0
Duzib251G0042 Durio zibethinus HOM05D002002 ORTHO05D008797 1.2e-61 241.9 496 38.9
Atru.chr11.2102 Acer truncatum HOM05D002002 ORTHO05D008797 2.1e-61 241.1 466 41.6
Cpa.g.sc33.18 Carica papaya HOM05D002002 ORTHO05D008797 2.8e-61 240.7 423 40.9
AUR62024280 Chenopodium quinoa HOM05D002002 ORTHO05D008797 2.4e-60 237.7 419 41.5
AUR62005461 Chenopodium quinoa HOM05D002002 ORTHO05D008797 5.8e-59 233.0 421 42.0
EL10Ac6g13807 Beta vulgaris HOM05D002002 ORTHO05D008797 9.3e-57 225.7 417 41.0
Nn4g22624 Nelumbo nucifera HOM05D002002 ORTHO05D008797 1.6e-56 224.9 481 40.3
vmacro16196 Vaccinium macrocarpon HOM05D002002 ORTHO05D008797 4.6e-56 223.4 422 41.5
Nn3g16709 Nelumbo nucifera HOM05D002002 ORTHO05D008797 7.8e-56 222.6 497 40.0
TAR374G0715 Trochodendron aralioides HOM05D002002 ORTHO05D008797 1.0e-55 222.2 482 38.8
CSS0037172 Camellia sinensis var. sinensis HOM05D002002 ORTHO05D008797 3.0e-55 220.7 519 36.8
CiPaw.05G182600 Carya illinoinensis HOM05D002002 ORTHO05D008797 6.6e-55 219.5 415 43.9
Gohir.A04G136700 Gossypium hirsutum HOM05D002002 ORTHO05D008797 6.6e-55 219.5 459 38.6
TWI75G1475 Tripterygium wilfordii HOM05D002002 ORTHO05D008797 1.1e-54 218.8 457 40.7
DCAR_031153 Daucus carota HOM05D002002 ORTHO05D008797 2.5e-54 217.6 421 41.1
Cfa009210 Carpinus fangiana HOM05D002002 ORTHO05D008797 1.3e-53 215.3 442 40.5
Gohir.D04G179800 Gossypium hirsutum HOM05D002002 ORTHO05D008797 8.1e-53 212.6 459 38.1
Sabra08G0141500 Salix brachista HOM05D002002 ORTHO05D008797 1.1e-52 212.2 433 40.2
Gorai.012G173000 Gossypium raimondii HOM05D002002 ORTHO05D008797 1.4e-52 211.8 459 38.1
Potri.010G046000 Populus trichocarpa HOM05D002002 ORTHO05D008797 2.4e-52 211.1 425 39.1
ClCG05G025730 Citrullus lanatus HOM05D002002 ORTHO05D008797 1.5e-51 208.4 577 36.4
Eucgr.H02500 Eucalyptus grandis HOM05D002002 ORTHO05D008797 1.5e-51 208.4 464 40.3
CsaV3_5G031140 Cucumis sativus L. HOM05D002002 ORTHO05D008797 4.5e-51 206.8 553 36.3
QL03p058108 Quercus lobata HOM05D002002 ORTHO05D008797 4.5e-51 206.8 449 38.1
MD16G1102300 Malus domestica HOM05D002002 ORTHO05D008797 1.7e-50 204.9 419 39.1
ECA233G4520 Erigeron canadensis HOM05D002002 ORTHO05D008797 8.4e-50 202.6 446 38.1
Sed0005394 Sechium edule HOM05D002002 ORTHO05D008797 1.1e-49 202.2 445 39.8
RcHm_v2.0_Chr4g0432951 Rosa chinensis HOM05D002002 ORTHO05D008797 1.4e-49 201.8 424 41.3
FAN17G1038 Fragaria x ananassa HOM05D002002 ORTHO05D008711 1.9e-49 201.4 435 41.4
Haze_12247 Corylus avellana HOM05D002002 ORTHO05D008711 2.4e-49 201.1 402 42.0
Potri.008G186900 Populus trichocarpa HOM05D002002 ORTHO05D008797 2.4e-49 201.1 454 39.4
FvH4_4g25541 Fragaria vesca HOM05D002002 ORTHO05D008797 5.4e-49 199.9 411 41.6
MELO3C011952.2 Cucumis melo HOM05D002002 ORTHO05D008711 7.1e-49 199.5 525 36.4
Lj4g0017193 Lotus japonicus HOM05D002002 ORTHO05D008797 4.3e-46 190.3 427 38.9
Duzib248G0209 Durio zibethinus HOM05D002002 ORTHO05D008797 9.6e-46 189.1 561 33.7
PSO017G3282 Papaver somniferum HOM05D002002 ORTHO05D008797 9.6e-46 189.1 436 38.8
Aqoxy3G01206 Aquilegia oxysepala HOM05D002002 ORTHO05D008797 1.3e-45 188.7 487 38.2
PSO478G2109 Papaver somniferum HOM05D002002 ORTHO05D008797 1.3e-45 188.7 437 39.8
CANSAT01G0132 Cannabis sativa HOM05D002002 ORTHO05D008797 2.1e-45 188.0 491 37.9
TAR622G0079 Trochodendron aralioides HOM05D002002 ORTHO05D008797 3.6e-45 187.2 352 43.5
Glyma.18G143900 Glycine max HOM05D002002 ORTHO05D008797 1.1e-44 185.7 440 38.4
Sc11g0000970 Simmondsia chinensis HOM05D002002 ORTHO05D008797 1.1e-44 185.7 466 36.3
DCAR_007056 Daucus carota HOM05D002002 ORTHO05D008797 3.1e-44 184.1 424 37.5
Hund25388 Selenicereus undatus HOM05D002002 ORTHO05D008797 6.9e-44 183.0 434 37.3
arahy.Tifrunner.gnm1.ann1.YSSX7I Arachis hypogaea HOM05D002002 ORTHO05D008797 9.0e-44 182.6 394 39.3
PGR119G0425 Punica granatum HOM05D002002 ORTHO05D008797 4.5e-43 180.3 422 37.7
Lalb_Chr16g0392181 Lupinus albus HOM05D002002 ORTHO05D008797 5.8e-43 179.9 481 38.0
arahy.Tifrunner.gnm1.ann1.PHTA8N Arachis hypogaea HOM05D002002 ORTHO05D008711 2.4e-41 174.5 478 36.4
Lalb_Chr05g0228431 Lupinus albus HOM05D002002 ORTHO05D008797 5.5e-41 173.3 458 37.3
unitig_26.g10348 Utricularia gibba HOM05D002002 ORTHO05D008797 2.7e-40 171.0 471 35.2
Ca_22584_v3 Cicer arietinum L. HOM05D002002 ORTHO05D008711 3.5e-40 170.6 401 38.4
Glyma.08G282400 Glycine max HOM05D002002 ORTHO05D008797 6.0e-40 169.9 434 37.3
Psat4g115320 Pisum sativum HOM05D002002 ORTHO05D008797 7.9e-40 169.5 454 37.7
Phvul.003G065200 Phaseolus vulgaris HOM05D002002 ORTHO05D008797 1.3e-39 168.7 405 40.2
TPR.G17755 Trifolium pratense HOM05D002002 ORTHO05D008711 6.7e-39 166.4 419 37.5
Lj6A812T43 Lonicera japonica HOM05D002002 ORTHO05D008797 9.6e-38 162.5 360 39.2
COL.COLO4_24277 Corchorus olitorius HOM05D002002 ORTHO05D008797 3.7e-37 160.6 246 45.1
Rhsim12G0110400 Rhododendron simsii HOM05D002002 ORTHO05D008797 9.0e-36 156.0 253 43.1
HanXRQChr08g0208141 Helianthus annuus HOM05D002002 ORTHO05D008797 1.5e-35 155.2 445 32.6
Cc11_g15720 Coffea canephora HOM05D002002 ORTHO05D008797 2.6e-35 154.5 430 34.4
ATR0824G114 Amborella trichopoda HOM05D002002 ORTHO05D008797 3.8e-34 150.6 430 37.4
MD13G1101700 Malus domestica HOM05D002002 ORTHO05D008797 5.5e-33 146.7 387 35.7
Lsat_1_v5_gn_8_152141 Lactuca sativa HOM05D002002 ORTHO05D008711 3.0e-31 141.0 488 32.4
Prupe.1G244100 Prunus persica HOM05D002002 ORTHO05D008797 3.7e-29 134.0 210 45.2
FAN22G2309 Fragaria x ananassa HOM05D002002 ORTHO05D008797 6.3e-29 133.3 216 47.2
SEGI_21221 Sequoiadendron giganteum HOM05D002002 ORTHO05D008797 2.0e-27 128.3 483 32.1
SEGI_37990 Sequoiadendron giganteum HOM05D002002 ORTHO05D008797 3.8e-26 124.0 463 31.3
Solyc05g013490.4 Solanum lycopersicum HOM05D002002 ORTHO05D008797 3.6e-24 117.5 260 37.7
HPP92_005414 Vanilla planifolia HOM05D002002 ORTHO05D008797 2.3e-23 114.8 497 29.6
Aa31LG4G10340 Aethionema arabicum HOM05D002002 ORTHO05D008711 5.1e-23 113.6 482 30.9
AL2G30050 Arabidopsis lyrata HOM05D002002 ORTHO05D008797 3.3e-22 110.9 463 32.4
Sp5g25780 Schrenkiella parvula HOM05D002002 ORTHO05D008797 5.3e-20 103.6 468 29.3
Thhalv10018098m.g Eutrema salsugineum HOM05D002002 ORTHO05D008797 1.0e-18 99.4 440 30.7
BcaB05g24599 Brassica carinata HOM05D002002 ORTHO05D008797 1.9e-17 95.1 445 29.2
TPR.G3025 Trifolium pratense HOM05D002002 ORTHO05D008797 3.2e-17 94.4 273 37.4
CDE07G1782 Ceratophyllum demersum HOM05D002002 ORTHO05D008797 2.1e-16 91.7 471 28.0
TPR.G3029 Trifolium pratense HOM05D002002 ORTHO05D008797 2.3e-15 88.2 348 32.8
Sed0026296 Sechium edule HOM05D002002 ORTHO05D008797 3.3e-14 84.3 388 30.2
Os04g0661700 Oryza sativa ssp. japonica HOM05D002002 ORTHO05D008797 2.2e-13 81.6 413 28.6
unitig_26.g10410 Utricularia gibba HOM05D002002 ORTHO05D008797 2.8e-13 81.3 133 45.9
A02p16740 Brassica napus HOM05D002002 ORTHO05D008797 1.0e-10 72.8 461 28.0
BraA02t06728Z Brassica rapa HOM05D002002 ORTHO05D008797 1.3e-10 72.4 497 27.2
TPR.G2569 Trifolium pratense HOM05D002002 ORTHO05D008797 1.1e-09 69.3 147 47.6
CARHR063850 Cardamine hirsuta HOM05D002002 ORTHO05D008797 5.5e-09 67.0 505 27.5
BcaC03g15213 Brassica carinata HOM05D002002 ORTHO05D008797 7.2e-09 66.6 438 26.5
C02p28000 Brassica napus HOM05D002002 ORTHO05D008797 7.2e-09 66.6 438 26.5
TPR.G1066 Trifolium pratense HOM05D002002 ORTHO05D008797 2.7e-08 64.7 130 46.9
AT1G70620 Arabidopsis thaliana HOM05D002002 ORTHO05D008797 3.6e-08 64.3 172 33.7
Carub.0002s1735 Capsella rubella HOM05D002002 ORTHO05D008797 6.7e-07 60.1 195 32.8


User provided reference genes

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