Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold98G29350 Striga asiatica HOM05D007685 ORTHO05D009136 2.1e-224 781.9 371 100.0
SGA_v2.0_scaffold98G29349 Striga asiatica HOM05D007685 ORTHO05D009136 2.1e-160 569.3 374 75.9
SGA_v2.0_scaffold36G14300 Striga asiatica HOM05D007685 ORTHO05D009136 1.1e-156 557.0 383 73.6
SGA_v2.0_scaffold364G49991 Striga asiatica HOM05D007685 ORTHO05D009136 1.1e-145 520.4 385 69.1
SGA_v2.0_scaffold125G33660 Striga asiatica HOM05D007685 ORTHO05D009136 5.3e-127 458.4 395 63.8
SGA_v2.0_scaffold36G14304 Striga asiatica HOM05D007685 ORTHO05D009136 1.5e-116 423.7 388 59.3
SGA_v2.0_scaffold227G43147 Striga asiatica HOM05D007685 ORTHO05D009136 3.6e-99 365.9 252 70.6
SGA_v2.0_scaffold205G41700 Striga asiatica HOM05D007685 ORTHO05D009136 1.0e-90 337.8 402 48.8
SGA_v2.0_scaffold205G41698 Striga asiatica HOM05D007685 ORTHO05D009136 6.8e-90 335.1 390 50.0
SGA_v2.0_scaffold481G52326 Striga asiatica HOM05D007685 ORTHO05D009136 3.9e-85 319.3 409 47.4
SGA_v2.0_scaffold205G41699 Striga asiatica HOM05D007685 ORTHO05D009136 1.1e-79 301.2 395 46.6
SGA_v2.0_scaffold52G19053 Striga asiatica HOM05D007685 ORTHO05D009136 1.4e-74 284.3 384 46.1
SGA_v2.0_scaffold79G25498 Striga asiatica HOM05D007685 ORTHO05D009136 5.8e-73 278.9 391 45.5
SGA_v2.0_scaffold52G19069 Striga asiatica HOM05D007685 ORTHO05D009136 1.9e-71 273.9 381 45.4
SGA_v2.0_scaffold240G44161 Striga asiatica HOM05D007685 ORTHO05D009136 3.5e-70 269.6 401 45.1
SGA_v2.0_scaffold70G23609 Striga asiatica HOM05D007685 ORTHO05D009136 4.6e-70 269.2 402 45.0
SGA_v2.0_scaffold70G23612 Striga asiatica HOM05D007685 ORTHO05D009136 3.9e-69 266.2 402 43.8
SGA_v2.0_scaffold66G22255 Striga asiatica HOM05D007685 ORTHO05D009136 8.6e-69 265.0 406 42.4
SGA_v2.0_scaffold66G22356 Striga asiatica HOM05D007685 ORTHO05D009136 1.9e-68 263.8 407 44.7
SGA_v2.0_scaffold31G12686 Striga asiatica HOM05D007685 ORTHO05D009136 1.2e-67 261.2 393 43.0
SGA_v2.0_scaffold66G22258 Striga asiatica HOM05D007685 ORTHO05D009136 6.9e-66 255.4 404 41.6
SGA_v2.0_scaffold204G41656 Striga asiatica HOM05D007685 ORTHO05D009136 1.5e-65 254.2 388 42.8
SGA_v2.0_scaffold27G11432 Striga asiatica HOM05D007685 ORTHO05D009136 2.9e-64 250.0 470 38.7
SGA_v2.0_scaffold10G05461 Striga asiatica HOM05D007685 ORTHO05D009136 4.6e-62 242.7 386 42.2
SGA_v2.0_scaffold240G44172 Striga asiatica HOM05D007685 ORTHO05D009136 1.4e-58 231.1 372 43.8
Migut.K01121 Erythranthe guttata HOM05D007685 ORTHO05D009136 9.3e-55 218.4 396 37.4
Migut.K01116 Erythranthe guttata HOM05D007685 ORTHO05D009136 1.5e-52 211.1 379 36.7
SGA_v2.0_scaffold70G23606 Striga asiatica HOM05D000522 ORTHO05D000565 9.6e-52 208.4 346 43.4
Migut.J00230 Erythranthe guttata HOM05D007685 ORTHO05D009136 6.9e-50 202.2 386 35.8
SGA_v2.0_scaffold138G35171 Striga asiatica HOM05D007685 ORTHO05D009136 3.4e-49 199.9 382 36.6
SGA_v2.0_scaffold123G33494 Striga asiatica HOM05D007685 ORTHO05D009136 9.9e-49 198.4 389 37.8
SGA_v2.0_scaffold18G08226 Striga asiatica HOM05D007685 ORTHO05D009136 6.4e-48 195.7 174 59.2
Migut.K00780 Erythranthe guttata HOM05D007685 ORTHO05D009136 3.2e-47 193.4 409 35.0
Migut.H00266 Erythranthe guttata HOM05D007685 ORTHO05D009136 5.5e-47 192.6 371 35.3
SGA_v2.0_scaffold27G11433 Striga asiatica HOM05D007685 ORTHO05D009136 1.6e-46 191.0 336 39.6
SGA_v2.0_scaffold205G41695 Striga asiatica HOM05D007685 ORTHO05D009136 4.6e-46 189.5 159 59.7
Migut.H01396 Erythranthe guttata HOM05D007685 ORTHO05D009136 6.0e-46 189.1 422 34.8
Migut.K00645 Erythranthe guttata HOM05D007685 ORTHO05D009136 1.3e-45 188.0 368 35.3
SGA_v2.0_scaffold211G42108 Striga asiatica HOM05D007685 ORTHO05D009136 8.7e-45 185.3 154 63.0
SGA_v2.0_scaffold205G41702 Striga asiatica HOM05D007685 ORTHO05D009136 5.6e-44 182.6 153 61.4
SGA_v2.0_scaffold11G05774 Striga asiatica HOM05D007685 ORTHO05D009136 2.2e-40 170.6 406 33.5
Migut.H00978 Erythranthe guttata HOM05D007685 ORTHO05D009136 1.4e-39 167.9 420 32.9
SGA_v2.0_scaffold70G23610 Striga asiatica HOM05D007685 ORTHO05D009136 7.1e-39 165.6 379 35.9
SGA_v2.0_scaffold52G19068 Striga asiatica HOM05D007685 ORTHO05D009136 7.9e-38 162.2 336 36.9
SGA_v2.0_scaffold240G44169 Striga asiatica HOM05D007685 ORTHO05D009136 1.1e-36 158.3 388 34.0
Migut.H00447 Erythranthe guttata HOM05D007685 ORTHO05D009136 1.9e-36 157.5 394 32.2
SGA_v2.0_scaffold79G25502 Striga asiatica HOM05D007685 ORTHO05D009136 2.5e-36 157.1 257 39.7
SGA_v2.0_scaffold218G42504 Striga asiatica HOM05D007685 ORTHO05D009136 4.1e-34 149.8 405 32.8
SGA_v2.0_scaffold9G04671 Striga asiatica HOM05D007685 ORTHO05D009136 5.3e-34 149.4 413 33.4
PGSC0003DMG400024605 Solanum tuberosum HOM05D007685 ORTHO05D009136 2.0e-33 147.5 405 29.1
Migut.K00648 Erythranthe guttata HOM05D007685 ORTHO05D009136 7.6e-33 145.6 421 29.0
Migut.D00968 Erythranthe guttata HOM05D007685 ORTHO05D009136 1.0e-32 145.2 389 32.1
SGA_v2.0_scaffold405G51033 Striga asiatica HOM05D007685 ORTHO05D009136 3.8e-32 143.3 412 31.6
SGA_v2.0_scaffold405G51038 Striga asiatica HOM05D007685 ORTHO05D009136 3.8e-32 143.3 412 31.6
Migut.H00267 Erythranthe guttata HOM05D007685 ORTHO05D009136 4.2e-31 139.8 415 31.1
SGA_v2.0_scaffold186G40186 Striga asiatica HOM05D007685 ORTHO05D009136 2.7e-30 137.1 385 31.2
SGA_v2.0_scaffold228G43240 Striga asiatica HOM05D007685 ORTHO05D009136 7.9e-30 135.6 419 28.6
Migut.H02253 Erythranthe guttata HOM05D007685 ORTHO05D009136 2.3e-29 134.0 222 38.3
SGA_v2.0_scaffold1514G53974 Striga asiatica HOM05D007685 ORTHO05D009136 6.7e-29 132.5 404 30.7
SGA_v2.0_scaffold10G05459 Striga asiatica HOM05D007685 ORTHO05D009136 8.7e-29 132.1 183 47.5
SGA_v2.0_scaffold240G44166 Striga asiatica HOM05D007685 ORTHO05D009136 8.7e-29 132.1 147 52.4
SGA_v2.0_scaffold359G49862 Striga asiatica HOM05D007685 ORTHO05D009136 8.7e-29 132.1 406 31.3
SGA_v2.0_scaffold461G51963 Striga asiatica HOM05D007685 ORTHO05D009136 1.1e-28 131.7 423 28.8
SGA_v2.0_scaffold3G01717 Striga asiatica HOM05D007685 ORTHO05D009136 1.5e-28 131.3 151 49.7
Migut.C00362 Erythranthe guttata HOM05D007685 ORTHO05D009136 1.3e-27 128.3 400 27.0
SGA_v2.0_scaffold138G35173 Striga asiatica HOM05D007685 ORTHO05D009136 4.8e-27 126.3 232 39.2
SGA_v2.0_scaffold205G41697 Striga asiatica HOM05D007685 ORTHO05D009136 4.8e-27 126.3 123 51.2
SGA_v2.0_scaffold135G34952 Striga asiatica HOM05D007685 ORTHO05D009136 1.1e-26 125.2 417 29.3
SGA_v2.0_scaffold247G44879 Striga asiatica HOM05D007685 ORTHO05D009136 9.1e-26 122.1 86 72.1
SGA_v2.0_scaffold11G05775 Striga asiatica HOM05D007685 ORTHO05D009136 2.6e-25 120.6 226 39.4
SGA_v2.0_scaffold135G34948 Striga asiatica HOM05D007685 ORTHO05D009136 5.9e-25 119.4 205 40.0
SGA_v2.0_scaffold135G34942 Striga asiatica HOM05D007685 ORTHO05D009136 3.8e-24 116.7 206 39.8
Migut.K00649 Erythranthe guttata HOM05D007685 ORTHO05D009136 1.4e-21 108.2 405 27.4
SGA_v2.0_scaffold52G19067 Striga asiatica HOM05D007685 ORTHO05D009136 3.0e-21 107.1 97 59.8
Migut.K00647 Erythranthe guttata HOM05D007685 ORTHO05D009136 2.0e-20 104.4 377 26.5
Manes.07G051600 Manihot esculenta HOM05D000151 ORTHO05D000074 3.3e-20 103.6 402 28.4
SGA_v2.0_scaffold51G18692 Striga asiatica HOM05D007685 ORTHO05D009136 2.8e-19 100.5 154 44.2
SGA_v2.0_scaffold135G34957 Striga asiatica HOM05D007685 ORTHO05D009136 1.1e-18 98.6 158 38.6
Migut.K00435 Erythranthe guttata HOM05D007685 ORTHO05D009136 1.4e-18 98.2 129 43.4
Dinv22141 Davidia involucrata HOM05D007685 ORTHO05D009136 3.1e-18 97.1 265 30.2
SGA_v2.0_scaffold300G47760 Striga asiatica HOM05D007685 ORTHO05D009136 9.1e-18 95.5 115 47.8
SGA_v2.0_scaffold110G31308 Striga asiatica HOM05D007685 ORTHO05D009136 3.4e-17 93.6 93 53.8
CAN.G1432.1 Capsicum annuum HOM05D013589 ORTHO05D009136 5.0e-16 89.7 396 25.3
CAN.G760.4 Capsicum annuum HOM05D007685 ORTHO05D009136 1.4e-15 88.2 211 32.7
CAN.G1432.3 Capsicum annuum HOM05D013589 ORTHO05D009136 2.5e-15 87.4 399 25.3
Eucgr.H00116 Eucalyptus grandis HOM05D000151 ORTHO05D000074 7.2e-15 85.9 296 28.7
Thecc.04G266500 Theobroma cacao HOM05D000151 ORTHO05D000074 7.2e-15 85.9 394 26.1
SGA_v2.0_scaffold9G05054 Striga asiatica HOM05D007685 ORTHO05D009136 9.4e-15 85.5 113 42.5
TWI09G1230 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 2.1e-14 84.3 379 25.9
Prupe.1G050400 Prunus persica HOM05D000151 ORTHO05D000074 1.4e-13 81.6 396 26.5
SGA_v2.0_scaffold106G30572 Striga asiatica HOM05D000403 ORTHO05D009136 1.1e-12 78.6 109 41.3
COL.COLO4_23779 Corchorus olitorius HOM05D000151 ORTHO05D000074 1.5e-12 78.2 388 22.7
Cfa001654 Carpinus fangiana HOM05D000151 ORTHO05D000074 5.7e-12 76.3 378 26.2
Migut.K00246 Erythranthe guttata HOM05D007685 ORTHO05D009136 7.4e-12 75.9 255 27.5
Cc10_g00920 Coffea canephora HOM05D000151 ORTHO05D000074 1.3e-11 75.1 381 26.0
Peaxi162Scf00074g00087 Petunia axillaris HOM05D000151 ORTHO05D000074 1.3e-11 75.1 397 25.4
Cfa003245 Carpinus fangiana HOM05D015779 ORTHO05D000074 1.7e-11 74.7 334 24.6
Cfa003248 Carpinus fangiana HOM05D015779 ORTHO05D000074 2.2e-11 74.3 334 24.6
Os11g0584100 Oryza sativa ssp. japonica HOM05D000151 ORTHO05D000074 3.7e-11 73.6 434 25.6
Haze_16879 Corylus avellana HOM05D000151 ORTHO05D000074 4.8e-11 73.2 379 25.1
SGA_v2.0_scaffold52G19054 Striga asiatica HOM05D007685 ORTHO05D009136 6.3e-11 72.8 91 47.3
Actinidia09337 Actinidia chinensis HOM05D000151 ORTHO05D000074 8.2e-11 72.4 348 23.0
Peaxi162Scf00119g01111 Petunia axillaris HOM05D000151 ORTHO05D000074 8.2e-11 72.4 395 24.8
Haze_06926 Corylus avellana HOM05D000151 ORTHO05D000074 1.1e-10 72.0 351 27.6
Dinv04305 Davidia involucrata HOM05D000151 ORTHO05D000074 1.1e-10 72.0 403 25.3
Nitab4.5_0002346g0060 Nicotiana tabacum HOM05D000151 ORTHO05D000074 1.1e-10 72.0 366 26.0
Peaxi162Scf00119g00123 Petunia axillaris HOM05D000151 ORTHO05D000074 1.4e-10 71.6 395 24.6
Haze_25743 Corylus avellana HOM05D015779 ORTHO05D000074 1.8e-10 71.2 371 25.9
Haze_06933 Corylus avellana HOM05D000151 ORTHO05D000074 2.4e-10 70.9 350 27.1
Peaxi162Scf00119g00124 Petunia axillaris HOM05D000151 ORTHO05D000074 2.4e-10 70.9 395 24.6
CiPaw.07G005300 Carya illinoinensis HOM05D000151 ORTHO05D000074 3.1e-10 70.5 390 23.1
SGA_v2.0_scaffold9G05056 Striga asiatica HOM05D007685 ORTHO05D009136 3.1e-10 70.5 85 42.4
Nitab4.5_0003173g0070 Nicotiana tabacum HOM05D000151 ORTHO05D000074 4.1e-10 70.1 371 25.9
Oeu049040.1 Olea europaea HOM05D000151 ORTHO05D000074 4.1e-10 70.1 243 26.7
Rhsim04G0081100 Rhododendron simsii HOM05D000151 ORTHO05D000074 4.1e-10 70.1 311 25.7
Cfa016448 Carpinus fangiana HOM05D015779 ORTHO05D000074 5.3e-10 69.7 356 25.6
Lalb_Chr10g0091511 Lupinus albus HOM05D000151 ORTHO05D000074 5.3e-10 69.7 372 25.3
MBI17_g17504_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 7.0e-10 69.3 346 26.0
Rhsim13G0207700 Rhododendron simsii HOM05D004351 ORTHO05D005196 7.0e-10 69.3 379 24.0
Rhsim02G0226200 Rhododendron simsii HOM05D000151 ORTHO05D000074 9.1e-10 68.9 367 25.9
vmacro00509 Vaccinium macrocarpon HOM05D000151 ORTHO05D000074 9.1e-10 68.9 312 24.4
Lalb_Chr10g0091531 Lupinus albus HOM05D000151 ORTHO05D000074 1.6e-09 68.2 372 25.3
TWI53G1253 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 1.6e-09 68.2 377 23.9
TAR636G0813 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.6e-09 68.2 324 25.0
Peaxi162Scf00074g00085 Petunia axillaris HOM05D000151 ORTHO05D000074 4.5e-09 66.6 397 24.4
AUR62017260 Chenopodium quinoa HOM05D000151 ORTHO05D000074 5.9e-09 66.2 354 24.9
Rhsim02G0229700 Rhododendron simsii HOM05D000151 ORTHO05D000074 7.7e-09 65.9 316 25.3
CAN.G206.109 Capsicum annuum HOM05D000635 ORTHO05D000488 1.0e-08 65.5 325 23.1
PGR042G0362 Punica granatum HOM05D000151 ORTHO05D000074 2.2e-08 64.3 107 37.4
TAR636G2694 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.2e-08 64.3 320 27.2
TAR636G2284 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.8e-08 63.5 320 27.2
CSS0034097 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 5.0e-08 63.2 376 22.9
CAN.G1203.1 Capsicum annuum HOM05D013589 ORTHO05D009136 5.0e-08 63.2 209 26.8
PGR042G2337 Punica granatum HOM05D000151 ORTHO05D000074 6.5e-08 62.8 107 37.4
Cfa009638 Carpinus fangiana HOM05D000151 ORTHO05D000074 1.1e-07 62.0 360 23.6
MBI19_g14409_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 1.1e-07 62.0 300 24.7
Rhsim02G0225000 Rhododendron simsii HOM05D006999 ORTHO05D008936 1.5e-07 61.6 155 32.9
TAR365G0814 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.2e-07 60.5 108 39.8
TAR636G2287 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.2e-07 60.5 110 37.3
Lj2P493T22 Lonicera japonica HOM05D000151 ORTHO05D000074 4.2e-07 60.1 350 23.7
Aqoxy7G01146 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 7.2e-07 59.3 93 40.9
CANSAT64G2057 Cannabis sativa HOM05D001286 ORTHO05D000440 9.4e-07 58.9 132 27.3
Haze_25744 Corylus avellana HOM05D015779 ORTHO05D000074 9.4e-07 58.9 278 28.1
Gohir.D04G099000 Gossypium hirsutum HOM05D001286 ORTHO05D000440 9.4e-07 58.9 133 28.6
Gorai.009G401400 Gossypium raimondii HOM05D001286 ORTHO05D000440 9.4e-07 58.9 133 28.6
Aqoxy2G00256 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.2e-06 58.5 320 25.3
Rhsim02G0224300 Rhododendron simsii HOM05D000151 ORTHO05D000074 1.6e-06 58.2 94 42.6
Rhsim02G0225100 Rhododendron simsii HOM05D000151 ORTHO05D000074 1.6e-06 58.2 155 33.5
Rhsim02G0229800 Rhododendron simsii HOM05D000151 ORTHO05D000074 2.1e-06 57.8 283 25.1
TAR636G1620 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.1e-06 57.8 320 27.2
Peaxi162Scf00074g00086 Petunia axillaris HOM05D000151 ORTHO05D000074 3.6e-06 57.0 214 27.6
Peaxi162Scf00074g00631 Petunia axillaris HOM05D000151 ORTHO05D000074 3.6e-06 57.0 398 22.6
Sc20g0006330 Simmondsia chinensis HOM05D001286 ORTHO05D000440 3.6e-06 57.0 133 28.6
Aqoxy5G02612 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 6.1e-06 56.2 91 42.9
Migut.B00574 Erythranthe guttata HOM05D007685 ORTHO05D009136 6.1e-06 56.2 107 33.6
FAN17G3078 Fragaria x ananassa HOM05D007346 ORTHO05D009044 8.0e-06 55.8 183 30.1
Rhsim02G0224100 Rhododendron simsii HOM05D000151 ORTHO05D000074 8.0e-06 55.8 91 45.1
Sopen03g034420 Solanum pennellii HOM05D000151 ORTHO05D000074 8.0e-06 55.8 377 24.7
PGSC0003DMG400018078 Solanum tuberosum HOM05D000151 ORTHO05D000074 8.0e-06 55.8 370 23.8


User provided reference genes

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