Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold98G29291 Striga asiatica HOM05D007794 ORTHO05D009810 4.1e-206 721.1 347 100.0
SGA_v2.0_scaffold207G41944 Striga asiatica HOM05D007794 ORTHO05D009810 1.4e-142 510.0 360 72.2
SGA_v2.0_scaffold207G41947 Striga asiatica HOM05D007794 ORTHO05D009810 4.1e-137 491.9 372 69.4
SGA_v2.0_scaffold98G29290 Striga asiatica HOM05D007794 ORTHO05D009810 7.2e-126 454.5 357 66.7
SGA_v2.0_scaffold207G41942 Striga asiatica HOM05D007794 ORTHO05D009810 1.1e-49 201.4 332 39.8
SGA_v2.0_scaffold207G41950 Striga asiatica HOM05D007794 ORTHO05D009810 9.6e-46 188.3 333 38.7
Oeu059895.1 Olea europaea HOM05D007794 ORTHO05D009810 2.8e-37 160.2 198 46.0
Manes.10G095400 Manihot esculenta HOM05D007794 ORTHO05D009810 1.9e-30 137.5 196 40.8
Manes.10G095300 Manihot esculenta HOM05D007794 ORTHO05D009810 3.3e-30 136.7 222 37.4
Hma1.2p1_0908F.1_g235590 Hydrangea macrophylla HOM05D007794 ORTHO05D009810 5.7e-30 136.0 211 39.8
Hma1.2p1_0908F.1_g235600 Hydrangea macrophylla HOM05D007794 ORTHO05D009810 8.2e-29 132.1 221 38.9
Sabra09G0060800 Salix brachista HOM05D007794 ORTHO05D009810 8.2e-29 132.1 200 39.5
Sopen01g048890 Solanum pennellii HOM05D007794 ORTHO05D009810 1.1e-28 131.7 303 31.7
Migut.K01245 Erythranthe guttata HOM05D007794 ORTHO05D009810 4.1e-28 129.8 225 35.1
Thecc.02G126700 Theobroma cacao HOM05D007794 ORTHO05D009810 4.1e-28 129.8 244 36.5
Migut.N01109 Erythranthe guttata HOM05D007794 ORTHO05D009810 6.9e-28 129.0 199 36.7
QL09p046398 Quercus lobata HOM05D007794 ORTHO05D009810 2.0e-27 127.5 361 29.9
Potri.009G078900 Populus trichocarpa HOM05D007794 ORTHO05D009810 3.4e-27 126.7 204 39.2
Rhsim05G0099600 Rhododendron simsii HOM05D007794 ORTHO05D009810 7.7e-27 125.6 313 31.3
vmacro19603 Vaccinium macrocarpon HOM05D007794 ORTHO05D009810 7.7e-27 125.6 237 35.0
Migut.N01108 Erythranthe guttata HOM05D007794 ORTHO05D009810 1.0e-26 125.2 199 36.7
Actinidia28021 Actinidia chinensis HOM05D007794 ORTHO05D009810 1.7e-26 124.4 211 35.5
vmacro00480 Vaccinium macrocarpon HOM05D007794 ORTHO05D009810 1.7e-26 124.4 219 35.6
Oeu059893.1 Olea europaea HOM05D007794 ORTHO05D009810 2.2e-26 124.0 172 43.0
Rhsim05G0099400 Rhododendron simsii HOM05D007794 ORTHO05D009810 1.4e-25 121.3 195 37.9
Nitab4.5_0000935g0170 Nicotiana tabacum HOM05D007794 ORTHO05D009810 2.5e-25 120.6 193 35.8
Ciclev10030146m.g Citrus clementina HOM05D007794 ORTHO05D009810 9.4e-25 118.6 211 35.1
Rhsim05G0099000 Rhododendron simsii HOM05D007794 ORTHO05D009810 9.4e-25 118.6 210 34.8
VMungo0251G0278 Vigna mungo HOM05D007794 ORTHO05D009810 2.1e-24 117.5 198 36.4
Ciclev10030159m.g Citrus clementina HOM05D007794 ORTHO05D009810 6.1e-24 115.9 193 37.3
Prupe.8G073600 Prunus persica HOM05D007794 ORTHO05D009810 7.9e-24 115.5 201 36.8
Rhsim05G0098900 Rhododendron simsii HOM05D007794 ORTHO05D009810 7.9e-24 115.5 186 37.1
Nitab4.5_0002750g0020 Nicotiana tabacum HOM05D007794 ORTHO05D009810 3.0e-23 113.6 193 34.7
Peaxi162Scf00152g00085 Petunia axillaris HOM05D007794 ORTHO05D009810 1.5e-22 111.3 165 38.2
Sopen01g048870 Solanum pennellii HOM05D007794 ORTHO05D009810 4.3e-22 109.8 196 35.7
Solyc01g106510.2 Solanum lycopersicum HOM05D007794 ORTHO05D009810 5.7e-22 109.4 196 35.2
Manes.10G095500 Manihot esculenta HOM05D007794 ORTHO05D009810 1.7e-21 107.8 195 36.4
Peaxi162Scf00016g03335 Petunia axillaris HOM05D007794 ORTHO05D009810 1.7e-21 107.8 219 34.7
TPR.G17365 Trifolium pratense HOM05D007794 ORTHO05D009810 2.2e-21 107.5 196 35.7
Nitab4.5_0005908g0010 Nicotiana tabacum HOM05D007794 ORTHO05D009810 1.5e-19 101.3 219 32.0
Migut.C00209 Erythranthe guttata HOM05D007794 ORTHO05D009810 2.6e-19 100.5 294 28.2
Solyc01g106140.2 Solanum lycopersicum HOM05D007794 ORTHO05D009810 1.0e-18 98.6 152 38.2
Glyma.08G066300 Glycine max HOM05D007794 ORTHO05D009810 2.2e-18 97.4 201 32.8
Nitab4.5_0001477g0100 Nicotiana tabacum HOM05D007794 ORTHO05D009810 2.2e-18 97.4 192 32.3
PGSC0003DMG400010680 Solanum tuberosum HOM05D007794 ORTHO05D009810 2.9e-18 97.1 152 37.5
Solyc01g106130.1 Solanum lycopersicum HOM05D007794 ORTHO05D009810 3.8e-18 96.7 152 37.5
PGSC0003DMG400005122 Solanum tuberosum HOM05D007794 ORTHO05D009810 3.8e-18 96.7 152 36.8
Nitab4.5_0005609g0010 Nicotiana tabacum HOM05D007794 ORTHO05D009810 5.0e-18 96.3 191 31.4
PGSC0003DMG400010679 Solanum tuberosum HOM05D007794 ORTHO05D009810 5.0e-18 96.3 152 38.2
Sopen01g048510 Solanum pennellii HOM05D007794 ORTHO05D009810 6.5e-18 95.9 152 37.5
Nitab4.5_0002750g0070 Nicotiana tabacum HOM05D007794 ORTHO05D009810 1.1e-17 95.1 151 37.1
CAN.G1074.4 Capsicum annuum HOM05D007794 ORTHO05D009810 1.4e-17 94.7 152 36.8
CAN.G504.32 Capsicum annuum HOM05D007794 ORTHO05D009810 5.5e-17 92.8 213 31.5
Nn3g21331 Nelumbo nucifera HOM05D007794 ORTHO05D009810 5.5e-17 92.8 165 37.0
PGSC0003DMG400035168 Solanum tuberosum HOM05D007794 ORTHO05D009810 7.2e-17 92.4 195 31.8
Migut.C00196 Erythranthe guttata HOM05D007794 ORTHO05D009810 2.7e-16 90.5 316 26.3
Sopen01g048520 Solanum pennellii HOM05D007794 ORTHO05D009810 2.7e-16 90.5 152 36.8
Solyc01g106530.1 Solanum lycopersicum HOM05D007794 ORTHO05D009810 3.9e-15 86.7 321 27.4
COL.COLO4_32419 Corchorus olitorius HOM05D007794 ORTHO05D009810 8.8e-15 85.5 141 36.9
Solyc01g106520.1 Solanum lycopersicum HOM05D007794 ORTHO05D009810 1.1e-14 85.1 150 35.3
Sopen01g048880 Solanum pennellii HOM05D007794 ORTHO05D009810 1.5e-14 84.7 153 35.9
Cfa004824 Carpinus fangiana HOM05D007794 ORTHO05D009810 2.6e-14 84.0 166 37.3
Migut.C00194 Erythranthe guttata HOM05D007794 ORTHO05D009810 5.7e-14 82.8 164 32.3
Nn3g21338 Nelumbo nucifera HOM05D007794 ORTHO05D009810 9.7e-14 82.0 199 31.7
CAN.G504.74 Capsicum annuum HOM05D007794 ORTHO05D009810 8.2e-13 79.0 137 38.0
Migut.C00190 Erythranthe guttata HOM05D007794 ORTHO05D009810 1.4e-12 78.2 171 31.6
Ciclev10030054m.g Citrus clementina HOM05D007794 ORTHO05D009810 5.9e-11 72.8 116 37.9
TPR.G32148 Trifolium pratense HOM05D001479 ORTHO05D009810 7.7e-11 72.4 123 38.2
Rhsim02G0140200 Rhododendron simsii HOM05D007794 ORTHO05D009810 8.5e-10 68.9 100 41.0
Migut.C00191 Erythranthe guttata HOM05D007794 ORTHO05D009810 1.5e-09 68.2 164 28.7
Migut.N01107 Erythranthe guttata HOM05D007794 ORTHO05D009810 1.5e-09 68.2 132 36.4
Migut.C00193 Erythranthe guttata HOM05D007794 ORTHO05D009810 1.8e-07 61.2 164 29.3
Nn3g19115 Nelumbo nucifera HOM05D007794 ORTHO05D009810 8.8e-07 58.9 137 32.8
Migut.C00192 Erythranthe guttata HOM05D007794 ORTHO05D009810 2.6e-06 57.4 132 32.6
CAN.G504.34 Capsicum annuum HOM05D007794 ORTHO05D009810 5.7e-06 56.2 78 41.0
Rhsim05G0073700 Rhododendron simsii HOM05D000151 ORTHO05D000074 7.5e-06 55.8 125 32.0


User provided reference genes

Program Settings