Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold98G29290 Striga asiatica HOM05D007794 ORTHO05D009810 5.3e-220 767.3 366 100.0
SGA_v2.0_scaffold207G41947 Striga asiatica HOM05D007794 ORTHO05D009810 1.3e-154 550.1 371 75.5
SGA_v2.0_scaffold207G41944 Striga asiatica HOM05D007794 ORTHO05D009810 1.5e-153 546.6 367 76.0
SGA_v2.0_scaffold98G29291 Striga asiatica HOM05D007794 ORTHO05D009810 2.4e-127 459.5 357 66.7
SGA_v2.0_scaffold207G41942 Striga asiatica HOM05D007794 ORTHO05D009810 2.0e-54 217.2 369 40.1
SGA_v2.0_scaffold207G41950 Striga asiatica HOM05D007794 ORTHO05D009810 8.0e-51 205.3 341 41.3
Oeu059895.1 Olea europaea HOM05D007794 ORTHO05D009810 1.6e-43 181.0 206 50.0
Hma1.2p1_0908F.1_g235600 Hydrangea macrophylla HOM05D007794 ORTHO05D009810 2.5e-36 157.1 290 37.6
Hma1.2p1_0908F.1_g235590 Hydrangea macrophylla HOM05D007794 ORTHO05D009810 5.2e-34 149.4 234 41.0
QL09p046398 Quercus lobata HOM05D007794 ORTHO05D009810 8.9e-34 148.7 235 40.9
Oeu059893.1 Olea europaea HOM05D007794 ORTHO05D009810 9.8e-33 145.2 180 48.3
Thecc.02G126700 Theobroma cacao HOM05D007794 ORTHO05D009810 1.7e-32 144.4 252 37.3
Sopen01g048890 Solanum pennellii HOM05D007794 ORTHO05D009810 4.9e-32 142.9 311 33.1
Rhsim05G0099600 Rhododendron simsii HOM05D007794 ORTHO05D009810 1.1e-31 141.7 315 36.8
Nitab4.5_0000935g0170 Nicotiana tabacum HOM05D007794 ORTHO05D009810 1.4e-31 141.4 380 31.3
Nitab4.5_0002750g0020 Nicotiana tabacum HOM05D007794 ORTHO05D009810 1.4e-31 141.4 390 32.1
Rhsim05G0098900 Rhododendron simsii HOM05D007794 ORTHO05D009810 3.2e-31 140.2 172 44.8
Manes.10G095400 Manihot esculenta HOM05D007794 ORTHO05D009810 7.1e-31 139.0 200 42.0
Rhsim05G0099000 Rhododendron simsii HOM05D007794 ORTHO05D009810 1.2e-30 138.3 402 31.3
Manes.10G095300 Manihot esculenta HOM05D007794 ORTHO05D009810 1.6e-30 137.9 210 41.4
Migut.N01108 Erythranthe guttata HOM05D007794 ORTHO05D009810 7.8e-30 135.6 210 40.0
Rhsim05G0099400 Rhododendron simsii HOM05D007794 ORTHO05D009810 1.3e-29 134.8 204 41.7
Migut.K01245 Erythranthe guttata HOM05D007794 ORTHO05D009810 1.7e-29 134.4 214 38.8
Migut.N01109 Erythranthe guttata HOM05D007794 ORTHO05D009810 2.3e-29 134.0 214 38.8
vmacro19603 Vaccinium macrocarpon HOM05D007794 ORTHO05D009810 8.6e-29 132.1 200 39.0
Potri.009G078900 Populus trichocarpa HOM05D007794 ORTHO05D009810 1.5e-28 131.3 209 40.7
vmacro00480 Vaccinium macrocarpon HOM05D007794 ORTHO05D009810 1.9e-28 131.0 239 36.4
Manes.10G095500 Manihot esculenta HOM05D007794 ORTHO05D009810 4.3e-28 129.8 349 31.2
Sabra09G0060800 Salix brachista HOM05D007794 ORTHO05D009810 4.3e-28 129.8 208 38.9
Actinidia28021 Actinidia chinensis HOM05D007794 ORTHO05D009810 7.3e-28 129.0 198 38.9
Ciclev10030159m.g Citrus clementina HOM05D007794 ORTHO05D009810 2.8e-27 127.1 215 38.6
Peaxi162Scf00152g00085 Petunia axillaris HOM05D007794 ORTHO05D009810 3.6e-27 126.7 168 42.9
Solyc01g106510.2 Solanum lycopersicum HOM05D007794 ORTHO05D009810 8.9e-26 122.1 164 40.9
Nitab4.5_0002750g0070 Nicotiana tabacum HOM05D007794 ORTHO05D009810 1.5e-25 121.3 235 34.9
Prupe.8G073600 Prunus persica HOM05D007794 ORTHO05D009810 2.0e-25 120.9 247 36.4
Sopen01g048870 Solanum pennellii HOM05D007794 ORTHO05D009810 2.0e-25 120.9 164 40.2
Solyc01g106140.2 Solanum lycopersicum HOM05D007794 ORTHO05D009810 5.8e-25 119.4 153 45.1
TPR.G17365 Trifolium pratense HOM05D007794 ORTHO05D009810 5.8e-25 119.4 182 41.8
VMungo0251G0278 Vigna mungo HOM05D007794 ORTHO05D009810 7.6e-25 119.0 198 38.4
Solyc01g106130.1 Solanum lycopersicum HOM05D007794 ORTHO05D009810 2.2e-24 117.5 153 44.4
Peaxi162Scf00016g03335 Petunia axillaris HOM05D007794 ORTHO05D009810 2.9e-24 117.1 152 41.4
Nitab4.5_0005908g0010 Nicotiana tabacum HOM05D007794 ORTHO05D009810 3.8e-24 116.7 168 38.1
Migut.C00209 Erythranthe guttata HOM05D007794 ORTHO05D009810 1.4e-23 114.8 305 31.1
PGSC0003DMG400010680 Solanum tuberosum HOM05D007794 ORTHO05D009810 1.4e-23 114.8 153 42.5
CAN.G1074.4 Capsicum annuum HOM05D007794 ORTHO05D009810 1.9e-23 114.4 153 43.1
Nn3g21331 Nelumbo nucifera HOM05D007794 ORTHO05D009810 2.4e-23 114.0 249 38.6
Nitab4.5_0001477g0100 Nicotiana tabacum HOM05D007794 ORTHO05D009810 4.1e-23 113.2 168 38.1
PGSC0003DMG400010679 Solanum tuberosum HOM05D007794 ORTHO05D009810 7.1e-23 112.5 153 42.5
CAN.G504.32 Capsicum annuum HOM05D007794 ORTHO05D009810 9.2e-23 112.1 139 40.3
Glyma.08G066300 Glycine max HOM05D007794 ORTHO05D009810 4.6e-22 109.8 244 33.6
PGSC0003DMG400005122 Solanum tuberosum HOM05D007794 ORTHO05D009810 6.0e-22 109.4 139 41.0
Nitab4.5_0005609g0010 Nicotiana tabacum HOM05D007794 ORTHO05D009810 7.8e-22 109.0 165 37.6
Sopen01g048510 Solanum pennellii HOM05D007794 ORTHO05D009810 7.8e-22 109.0 153 42.5
Sopen01g048520 Solanum pennellii HOM05D007794 ORTHO05D009810 1.3e-21 108.2 153 42.5
Migut.C00196 Erythranthe guttata HOM05D007794 ORTHO05D009810 1.1e-20 105.1 165 37.0
PGSC0003DMG400035168 Solanum tuberosum HOM05D007794 ORTHO05D009810 1.1e-20 105.1 231 32.5
Solyc01g106520.1 Solanum lycopersicum HOM05D007794 ORTHO05D009810 5.6e-20 102.8 139 40.3
Solyc01g106530.1 Solanum lycopersicum HOM05D007794 ORTHO05D009810 7.3e-20 102.4 313 28.4
COL.COLO4_32419 Corchorus olitorius HOM05D007794 ORTHO05D009810 1.2e-19 101.7 148 40.5
Sopen01g048880 Solanum pennellii HOM05D007794 ORTHO05D009810 2.1e-19 100.9 139 40.3
Migut.N01107 Erythranthe guttata HOM05D007794 ORTHO05D009810 4.0e-18 96.7 164 40.9
Ciclev10030054m.g Citrus clementina HOM05D007794 ORTHO05D009810 6.9e-18 95.9 111 44.1
Ciclev10030146m.g Citrus clementina HOM05D007794 ORTHO05D009810 1.1e-15 88.6 160 35.6
Cfa004824 Carpinus fangiana HOM05D007794 ORTHO05D009810 6.6e-13 79.3 186 34.4
Migut.O00773 Erythranthe guttata HOM05D007794 ORTHO05D009810 8.7e-13 79.0 118 36.4
Nn3g19115 Nelumbo nucifera HOM05D007794 ORTHO05D009810 1.1e-12 78.6 110 43.6
Nn3g21338 Nelumbo nucifera HOM05D007794 ORTHO05D009810 4.8e-11 73.2 170 31.8
CAN.G504.74 Capsicum annuum HOM05D007794 ORTHO05D009810 8.1e-11 72.4 153 35.3
TPR.G32148 Trifolium pratense HOM05D001479 ORTHO05D009810 1.1e-10 72.0 165 34.5
Rhsim02G0140200 Rhododendron simsii HOM05D007794 ORTHO05D009810 5.3e-10 69.7 122 38.5
TAR636G2415 Trochodendron aralioides HOM05D001286 ORTHO05D000440 6.9e-10 69.3 152 30.9
Rhsim05G0099100 Rhododendron simsii HOM05D007794 ORTHO05D009810 4.2e-07 60.1 53 54.7


User provided reference genes

Program Settings