Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold98G29273 Striga asiatica HOM05D000361 ORTHO05D007482 3.7e-166 588.2 309 100.0
SGA_v2.0_scaffold258G45751 Striga asiatica HOM05D000361 ORTHO05D007482 6.2e-137 491.1 348 78.2
SGA_v2.0_scaffold258G45762 Striga asiatica HOM05D000361 ORTHO05D007482 8.6e-131 470.7 323 80.2
SGA_v2.0_scaffold98G29280 Striga asiatica HOM05D005483 ORTHO05D007482 3.2e-125 452.2 314 78.3
SGA_v2.0_scaffold98G29268 Striga asiatica HOM05D000361 ORTHO05D007482 2.3e-115 419.5 285 84.6
MSTRG.8063 Avicennia marina HOM05D000361 ORTHO05D007482 2.3e-107 392.9 335 66.3
Migut.K01134 Erythranthe guttata HOM05D000361 ORTHO05D007482 8.1e-105 384.4 337 64.1
SGA_v2.0_scaffold98G29270 Striga asiatica HOM05D000361 ORTHO05D007482 5.1e-99 365.2 310 70.0
SalBow2G1437 Salvia bowleyana HOM05D000361 ORTHO05D007482 6.7e-99 364.8 342 60.5
Oeu010265.1 Olea europaea HOM05D000361 ORTHO05D007482 3.4e-95 352.4 302 64.6
Cfa009472 Carpinus fangiana HOM05D002839 ORTHO05D007482 1.3e-94 350.5 316 62.0
Thecc.01G239700 Theobroma cacao HOM05D000361 ORTHO05D007482 1.6e-92 343.6 328 59.1
Dinv06935 Davidia involucrata HOM05D000361 ORTHO05D007482 2.1e-92 343.2 333 58.3
Manes.08G099300 Manihot esculenta HOM05D000361 ORTHO05D007482 2.7e-92 342.8 315 61.3
Aqoxy5G02980 Aquilegia oxysepala HOM05D000361 ORTHO05D007482 4.6e-92 342.0 316 61.4
Nn4g22072 Nelumbo nucifera HOM05D000361 ORTHO05D007482 4.6e-92 342.0 317 60.3
Hma1.2p1_0738F.1_g210960 Hydrangea macrophylla HOM05D000361 ORTHO05D007482 1.3e-91 340.5 308 61.4
DCAR_026439 Daucus carota HOM05D000361 ORTHO05D007482 3.0e-91 339.3 320 59.7
Nitab4.5_0002113g0010 Nicotiana tabacum HOM05D000361 ORTHO05D007482 3.9e-91 339.0 329 58.4
CiPaw.06G111400 Carya illinoinensis HOM05D000361 ORTHO05D007482 6.7e-91 338.2 316 60.1
TAR629G3206 Trochodendron aralioides HOM05D000361 ORTHO05D007482 1.5e-90 337.0 318 60.7
Duzib160G0854 Durio zibethinus HOM05D000361 ORTHO05D007482 4.3e-90 335.5 314 60.2
Ciclev10027769m.g Citrus clementina HOM05D000361 ORTHO05D007482 5.7e-90 335.1 309 60.5
Peaxi162Scf01167g00115 Petunia axillaris HOM05D000361 ORTHO05D007482 1.6e-89 333.6 331 56.8
GSVIVG01001119001 Vitis vinifera HOM05D000361 ORTHO05D007482 2.8e-89 332.8 338 59.2
Hund06727 Selenicereus undatus HOM05D000361 ORTHO05D007482 3.7e-89 332.4 317 60.6
Gorai.005G120400 Gossypium raimondii HOM05D000361 ORTHO05D007482 4.8e-89 332.0 314 58.3
MBI11_g23193_MAGBIO Magnolia biondii HOM05D000361 ORTHO05D007482 4.8e-89 332.0 317 60.3
Sopen11g017320 Solanum pennellii HOM05D000361 ORTHO05D007482 1.1e-88 330.9 302 60.3
PGSC0003DMG400002190 Solanum tuberosum HOM05D000361 ORTHO05D007482 1.8e-88 330.1 302 60.3
Psat0s4013g0080 Pisum sativum HOM05D000361 ORTHO05D007482 5.3e-88 328.6 309 58.3
unitig_26.g10437 Utricularia gibba HOM05D000361 ORTHO05D007482 6.9e-88 328.2 339 56.0
Gohir.A03G086700 Gossypium hirsutum HOM05D000361 ORTHO05D007482 2.0e-87 326.6 314 57.3
Potri.001G070500 Populus trichocarpa HOM05D000361 ORTHO05D007482 2.0e-87 326.6 331 58.0
Haze_12528 Corylus avellana HOM05D000361 ORTHO05D007482 3.4e-87 325.9 367 53.4
Gohir.A09G002700 Gossypium hirsutum HOM05D000361 ORTHO05D007482 5.9e-87 325.1 307 58.0
RcHm_v2.0_Chr4g0428411 Rosa chinensis HOM05D000361 ORTHO05D007482 7.7e-87 324.7 332 55.4
Ah.14g085960 Amaranthus hybridus HOM05D000361 ORTHO05D007482 1.0e-86 324.3 335 55.2
Cc11_g14860 Coffea canephora HOM05D000361 ORTHO05D007482 1.0e-86 324.3 311 61.1
TPR.G25402 Trifolium pratense HOM05D000361 ORTHO05D007482 2.9e-86 322.8 308 58.4
CDE05G0767 Ceratophyllum demersum HOM05D000361 ORTHO05D007482 3.8e-86 322.4 318 58.8
Nitab4.5_0005286g0020 Nicotiana tabacum HOM05D000361 ORTHO05D007482 3.8e-86 322.4 354 53.7
Sabra01G0049500 Salix brachista HOM05D000361 ORTHO05D007482 6.5e-86 321.6 333 56.5
Eucgr.B03569 Eucalyptus grandis HOM05D000361 ORTHO05D007482 8.5e-86 321.2 288 61.8
ECA246G5349 Erigeron canadensis HOM05D000361 ORTHO05D007482 1.4e-85 320.5 343 56.0
Lsat_1_v5_gn_3_33321 Lactuca sativa HOM05D000361 ORTHO05D007482 1.4e-85 320.5 316 57.9
vmacro15518 Vaccinium macrocarpon HOM05D000361 ORTHO05D007482 1.4e-85 320.5 314 59.9
Gorai.006G003100 Gossypium raimondii HOM05D000361 ORTHO05D007482 3.2e-85 319.3 307 57.7
Gohir.D09G002500 Gossypium hirsutum HOM05D000361 ORTHO05D007482 5.5e-85 318.5 307 57.7
Sc10g0009070 Simmondsia chinensis HOM05D000361 ORTHO05D007482 7.2e-85 318.2 326 56.1
CANSAT21G0886 Cannabis sativa HOM05D000361 ORTHO05D007482 9.4e-85 317.8 313 57.2
CAN.G624.12 Capsicum annuum HOM05D000361 ORTHO05D007482 1.6e-84 317.0 304 58.6
Ca_21434_v3 Cicer arietinum L. HOM05D000361 ORTHO05D007482 2.7e-84 316.2 322 57.1
Glyma.07G238400 Glycine max HOM05D000361 ORTHO05D007482 7.9e-84 314.7 314 56.7
Medtr4g122270 Medicago truncatula HOM05D000361 ORTHO05D007482 1.8e-83 313.5 320 55.6
Rhsim13G0167000 Rhododendron simsii HOM05D000361 ORTHO05D007482 3.9e-83 312.4 318 57.2
Lalb_Chr17g0344991 Lupinus albus HOM05D000361 ORTHO05D007482 5.1e-83 312.0 313 56.5
CSS0019126 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D007482 1.1e-82 310.8 317 58.7
CSS0044557 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D007482 1.1e-82 310.8 317 58.7
TWI18G1079 Tripterygium wilfordii HOM05D000361 ORTHO05D007482 2.5e-82 309.7 310 56.1
PSO478G1108 Papaver somniferum HOM05D000361 ORTHO05D007482 3.3e-82 309.3 322 58.1
arahy.Tifrunner.gnm1.ann1.D87PD7 Arachis hypogaea HOM05D000361 ORTHO05D007482 4.3e-82 308.9 324 55.2
Hma1.2p1_0738F.1_g210950 Hydrangea macrophylla HOM05D000361 ORTHO05D007482 4.3e-82 308.9 321 56.1
QL03p048338 Quercus lobata HOM05D000361 ORTHO05D007482 4.3e-82 308.9 319 56.1
HanXRQChr06g0175361 Helianthus annuus HOM05D000361 ORTHO05D007482 7.4e-82 308.1 309 60.2
Prupe.1G211500 Prunus persica HOM05D000361 ORTHO05D007482 7.4e-82 308.1 335 54.6
arahy.Tifrunner.gnm1.ann1.WNQC8Q Arachis hypogaea HOM05D000361 ORTHO05D007482 1.3e-81 307.4 324 55.9
Glyma.17G035000 Glycine max HOM05D000361 ORTHO05D007482 1.7e-81 307.0 314 55.1
AUR62034021 Chenopodium quinoa HOM05D000361 ORTHO05D007482 2.2e-81 306.6 337 55.8
THA.LOC104801409 Tarenaya hassleriana HOM05D000361 ORTHO05D007482 8.2e-81 304.7 328 55.5
Atru.chr12.1475 Acer truncatum HOM05D000361 ORTHO05D007482 3.1e-80 302.8 321 54.5
Phvul.003G116100 Phaseolus vulgaris HOM05D000361 ORTHO05D007482 6.9e-80 301.6 315 57.1
Cpa.g.sc1761.2 Carica papaya HOM05D000361 ORTHO05D007482 2.0e-79 300.1 316 55.1
Zm00001eb169610 Zea mays HOM05D000361 ORTHO05D007482 3.4e-79 299.3 331 53.8
Actinidia30574 Actinidia chinensis HOM05D000361 ORTHO05D007482 7.7e-79 298.1 315 59.7
Aa31LG3G14210 Aethionema arabicum HOM05D000361 ORTHO05D007482 1.0e-78 297.7 324 53.7
Sed0006329 Sechium edule HOM05D000361 ORTHO05D007482 2.9e-78 296.2 310 54.8
AT1G44900 Arabidopsis thaliana HOM05D000361 ORTHO05D007482 8.5e-78 294.7 328 52.4
CsaV3_3G032880 Cucumis sativus L. HOM05D000361 ORTHO05D007482 3.2e-77 292.7 326 52.5
Solyc11g040120.3 Solanum lycopersicum HOM05D000361 ORTHO05D007482 7.2e-77 291.6 239 65.7
PSO017G0122 Papaver somniferum HOM05D000361 ORTHO05D007482 9.4e-77 291.2 322 57.1
ClCG10G013030 Citrullus lanatus HOM05D000361 ORTHO05D007482 1.2e-76 290.8 316 53.8
AL1G52570 Arabidopsis lyrata HOM05D000361 ORTHO05D007482 1.6e-76 290.4 325 52.9
COL.COLO4_36324 Corchorus olitorius HOM05D000361 ORTHO05D007482 1.6e-76 290.4 312 54.2
CARHR036120 Cardamine hirsuta HOM05D000361 ORTHO05D007482 3.6e-76 289.3 327 50.8
ATR0582G147 Amborella trichopoda HOM05D000361 ORTHO05D007482 6.1e-76 288.5 314 53.2
Lj3A1078T19 Lonicera japonica HOM05D000361 ORTHO05D007482 1.8e-75 287.0 313 54.6
MD16G1144700 Malus domestica HOM05D000361 ORTHO05D007482 1.8e-75 287.0 319 54.5
FAN12G2733 Fragaria x ananassa HOM05D000361 ORTHO05D007482 3.9e-75 285.8 403 45.4
FAN17G1841 Fragaria x ananassa HOM05D000361 ORTHO05D007482 5.1e-75 285.4 313 52.4
Lj4g0014568 Lotus japonicus HOM05D000361 ORTHO05D007482 5.1e-75 285.4 313 54.6
C06p01030 Brassica napus HOM05D000361 ORTHO05D007482 6.7e-75 285.0 316 52.2
BolC6t35239H Brassica oleracea HOM05D000361 ORTHO05D007482 6.7e-75 285.0 316 52.2
BcaC08g42885 Brassica carinata HOM05D000361 ORTHO05D007482 8.8e-75 284.6 316 52.2
VMungo1215G2015 Vigna mungo HOM05D000361 ORTHO05D007482 5.7e-74 282.0 309 52.4
BcaB04g17580 Brassica carinata HOM05D000361 ORTHO05D007482 9.7e-74 281.2 320 52.2
PGR102G2757 Punica granatum HOM05D000361 ORTHO05D007482 1.7e-73 280.4 317 53.0
Os11g0484300 Oryza sativa ssp. japonica HOM05D000361 ORTHO05D007482 2.2e-73 280.0 346 51.4
MD13G1134100 Malus domestica HOM05D000361 ORTHO05D007482 6.3e-73 278.5 319 51.7
Carub.0001s3540 Capsella rubella HOM05D000361 ORTHO05D007482 8.2e-73 278.1 326 54.6
BcaC07g37281 Brassica carinata HOM05D000361 ORTHO05D007482 1.4e-72 277.3 302 54.3
A10p07200 Brassica napus HOM05D000361 ORTHO05D007482 1.4e-72 277.3 306 53.3
C08p07110 Brassica napus HOM05D000361 ORTHO05D007482 1.4e-72 277.3 302 54.3
BolC8t47556H Brassica oleracea HOM05D000361 ORTHO05D007482 1.4e-72 277.3 302 54.3
BcaB07g33912 Brassica carinata HOM05D000361 ORTHO05D007482 1.8e-72 276.9 324 50.3
FvH4_4g22180 Fragaria vesca HOM05D000361 ORTHO05D007482 3.1e-72 276.2 332 50.6
A08p06290 Brassica napus HOM05D000361 ORTHO05D007482 4.1e-72 275.8 316 52.8
BraA08t32632Z Brassica rapa HOM05D000361 ORTHO05D007482 4.1e-72 275.8 316 52.8
Sp1g33770 Schrenkiella parvula HOM05D000361 ORTHO05D007482 4.5e-71 272.3 322 51.6
Thhalv10011214m.g Eutrema salsugineum HOM05D000361 ORTHO05D007482 1.0e-70 271.2 308 51.3
BraSC36t46098Z Brassica rapa HOM05D000361 ORTHO05D007482 1.7e-70 270.4 313 52.1
SHI04104 Sapria himalayana HOM05D000361 ORTHO05D007482 1.5e-69 267.3 346 47.1
EL10Ac8g19503 Beta vulgaris HOM05D000361 ORTHO05D007482 3.0e-67 259.6 328 49.7
MELO3C026749.2 Cucumis melo HOM05D000361 ORTHO05D007482 6.7e-67 258.5 310 50.0
HPP92_023046 Vanilla planifolia HOM05D000361 ORTHO05D007482 7.2e-53 211.8 149 70.5
HPP92_023097 Vanilla planifolia HOM05D000361 ORTHO05D007482 2.7e-52 209.9 149 69.8
Prupe.8G031700 Prunus persica HOM05D000361 ORTHO05D007482 5.0e-46 189.1 152 65.8
Pp3c1_34820 Physcomitrium patens HOM05D000361 ORTHO05D007482 1.3e-41 174.5 320 35.9
Mapoly0007s0014 Marchantia polymorpha HOM05D000361 ORTHO05D007482 9.2e-40 168.3 303 35.3
AagrBONN_evm.TU.Sc2ySwM_228.1650 Anthoceros agrestis HOM05D000361 ORTHO05D007482 1.6e-39 167.5 309 37.2
SMO340G0145 Selaginella moellendorffii HOM05D000361 ORTHO05D007482 9.5e-37 158.3 113 61.1
COL.COLO4_21590 Corchorus olitorius HOM05D000361 ORTHO05D029119 9.8e-34 148.3 174 53.4
Psat6g019600 Pisum sativum HOM05D000361 ORTHO05D007482 6.4e-33 145.6 88 76.1
CBR_g30227 Chara braunii HOM05D000019 ORTHO05D000002 1.9e-32 144.1 172 43.0
PRCOL_00001965 Prasinoderma coloniale HOM05D000361 ORTHO05D007482 8.1e-28 128.6 313 32.6
Gohir.D02G106100 Gossypium hirsutum HOM05D000361 ORTHO05D007482 1.5e-26 124.4 74 74.3
MCO02G357 Micromonas commoda HOM05D000361 ORTHO05D007482 4.4e-18 96.3 233 30.5
COL.COLO4_08826 Corchorus olitorius HOM05D000361 ORTHO05D029119 3.2e-16 90.1 124 50.8
AUR62042521 Chenopodium quinoa HOM05D000361 ORTHO05D007482 9.6e-13 78.6 45 80.0
COL.COLO4_24528 Corchorus olitorius HOM05D000361 ORTHO05D029119 9.6e-13 78.6 123 48.0
Cre07.g338000 Chlamydomonas reinhardtii HOM05D000361 ORTHO05D007482 4.7e-12 76.3 285 24.2
Haze_26192 Corylus avellana HOM05D000361 ORTHO05D007482 1.8e-11 74.3 144 31.2
HanXRQChr03g0075081 Helianthus annuus HOM05D000361 ORTHO05D015589 2.6e-10 70.5 57 63.2
FvH4_5g16060 Fragaria vesca HOM05D000361 ORTHO05D007482 7.6e-10 68.9 39 79.5
Lsat_1_v5_gn_3_4241 Lactuca sativa HOM05D003509 ORTHO05D014827 3.5e-07 60.1 57 54.4
MBI03_g34068_MAGBIO Magnolia biondii HOM05D005704 ORTHO05D015589 4.6e-07 59.7 121 34.7
MBI02_g27369_MAGBIO Magnolia biondii HOM05D000361 ORTHO05D015589 3.0e-06 57.0 40 62.5


User provided reference genes

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