Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold97G29200 Striga asiatica HOM05D000633 ORTHO05D399543 1.7e-49 199.1 107 100.0
SGA_v2.0_scaffold71G23898 Striga asiatica HOM05D000633 ORTHO05D000477 1.9e-16 89.4 56 75.0
SGA_v2.0_scaffold122G33325 Striga asiatica HOM05D000633 ORTHO05D000477 1.1e-13 80.1 55 69.1
SalBow6G0206 Salvia bowleyana HOM05D000633 ORTHO05D000477 3.3e-13 78.6 66 57.6
SalBow6G3297 Salvia bowleyana HOM05D000633 ORTHO05D000477 3.3e-13 78.6 66 57.6
Migut.I01091 Erythranthe guttata HOM05D000633 ORTHO05D000477 2.4e-11 72.4 64 53.1
SGA_v2.0_scaffold4G02068 Striga asiatica HOM05D000633 ORTHO05D000477 2.0e-10 69.3 66 53.0
MSTRG.9525 Avicennia marina HOM05D000633 ORTHO05D000477 2.6e-10 68.9 66 50.0
Migut.O00961 Erythranthe guttata HOM05D000633 ORTHO05D000477 5.8e-10 67.8 63 52.4
MSTRG.10940 Avicennia marina HOM05D000633 ORTHO05D000477 1.0e-09 67.0 57 57.9
MSTRG.22540 Avicennia marina HOM05D000633 ORTHO05D000477 1.3e-09 66.6 61 50.8
SalBow7G3591 Salvia bowleyana HOM05D000633 ORTHO05D000477 4.9e-09 64.7 63 44.4
ClCG07G014550 Citrullus lanatus HOM05D000633 ORTHO05D000477 8.4e-09 63.9 60 48.3
Dinv20418 Davidia involucrata HOM05D000633 ORTHO05D000477 8.4e-09 63.9 60 50.0
Phvul.010G128400 Phaseolus vulgaris HOM05D000633 ORTHO05D000477 2.5e-08 62.4 53 58.5
Oeu043639.1 Olea europaea HOM05D000633 ORTHO05D000477 3.2e-08 62.0 66 47.0
Solyc03g122300.3 Solanum lycopersicum HOM05D000633 ORTHO05D000477 4.2e-08 61.6 53 54.7
PGSC0003DMG400022897 Solanum tuberosum HOM05D000633 ORTHO05D000477 4.2e-08 61.6 53 54.7
Actinidia24720 Actinidia chinensis HOM05D000633 ORTHO05D004685 7.1e-08 60.8 57 49.1
Duzib160G0745 Durio zibethinus HOM05D000633 ORTHO05D000477 7.1e-08 60.8 53 50.9
Nitab4.5_0002716g0020 Nicotiana tabacum HOM05D000633 ORTHO05D000477 7.1e-08 60.8 57 49.1
Oeu000397.1 Olea europaea HOM05D000633 ORTHO05D000477 7.1e-08 60.8 47 55.3
Dinv37856 Davidia involucrata HOM05D000633 ORTHO05D000477 1.2e-07 60.1 57 49.1
Hma1.2p1_0291F.1_g114910 Hydrangea macrophylla HOM05D000633 ORTHO05D000477 1.2e-07 60.1 67 41.8
Sopen03g041030 Solanum pennellii HOM05D000633 ORTHO05D000477 1.2e-07 60.1 53 52.8
Manes.11G017400 Manihot esculenta HOM05D000633 ORTHO05D000477 1.6e-07 59.7 45 57.8
Actinidia26019 Actinidia chinensis HOM05D000633 ORTHO05D000477 2.1e-07 59.3 59 49.2
DCAR_007650 Daucus carota HOM05D000633 ORTHO05D000477 2.1e-07 59.3 41 65.9
Thecc.06G122700 Theobroma cacao HOM05D000633 ORTHO05D000477 2.7e-07 58.9 60 45.0
TWI59G0040 Tripterygium wilfordii HOM05D000633 ORTHO05D000477 2.7e-07 58.9 61 45.9
GSVIVG01016733001 Vitis vinifera HOM05D000633 ORTHO05D000477 2.7e-07 58.9 44 59.1
Actinidia21795 Actinidia chinensis HOM05D000633 ORTHO05D000477 3.5e-07 58.5 57 47.4
CSS0005178 Camellia sinensis var. sinensis HOM05D000633 ORTHO05D000477 3.5e-07 58.5 41 63.4
CAN.G862.49 Capsicum annuum HOM05D000633 ORTHO05D000477 3.5e-07 58.5 53 52.8
Duzib235G0787 Durio zibethinus HOM05D000633 ORTHO05D000477 3.5e-07 58.5 60 45.0
Gohir.A10G055500 Gossypium hirsutum HOM05D000633 ORTHO05D000477 3.5e-07 58.5 53 45.3
Gohir.D10G057400 Gossypium hirsutum HOM05D000633 ORTHO05D000477 3.5e-07 58.5 53 45.3
Gorai.011G061500 Gossypium raimondii HOM05D000633 ORTHO05D000477 3.5e-07 58.5 53 45.3
Hund31029 Selenicereus undatus HOM05D000633 ORTHO05D000477 3.5e-07 58.5 46 60.9
VMungo0331G1059 Vigna mungo HOM05D000633 ORTHO05D000477 3.5e-07 58.5 53 54.7
CDE11G0291 Ceratophyllum demersum HOM05D000633 ORTHO05D000477 4.6e-07 58.2 43 60.5
Cc00_g30810 Coffea canephora HOM05D000633 ORTHO05D000477 4.6e-07 58.2 45 55.6
Duzib192G0234 Durio zibethinus HOM05D000633 ORTHO05D000477 4.6e-07 58.2 60 45.0
Hma1.2p1_0229F.1_g096650 Hydrangea macrophylla HOM05D000633 ORTHO05D000477 4.6e-07 58.2 56 46.4
Rhsim08G0240300 Rhododendron simsii HOM05D000633 ORTHO05D000477 4.6e-07 58.2 54 50.0
CDE05G2991 Ceratophyllum demersum HOM05D000633 ORTHO05D000477 6.0e-07 57.8 43 58.1
Ciclev10026666m.g Citrus clementina HOM05D000633 ORTHO05D000477 6.0e-07 57.8 41 63.4
Hma1.2p1_0686F.1_g203325 Hydrangea macrophylla HOM05D000633 ORTHO05D000477 6.0e-07 57.8 54 50.0
Hma1.2p1_2485F.1_g323090 Hydrangea macrophylla HOM05D000633 ORTHO05D000477 6.0e-07 57.8 54 50.0
Nitab4.5_0002898g0080 Nicotiana tabacum HOM05D000633 ORTHO05D000477 6.0e-07 57.8 53 50.9
Nitab4.5_0005225g0010 Nicotiana tabacum HOM05D000633 ORTHO05D000477 6.0e-07 57.8 53 50.9
Gohir.A13G188200 Gossypium hirsutum HOM05D000633 ORTHO05D000477 7.9e-07 57.4 48 54.2
Gohir.D13G195100 Gossypium hirsutum HOM05D000633 ORTHO05D000477 7.9e-07 57.4 54 50.0
Gorai.013G221200 Gossypium raimondii HOM05D000633 ORTHO05D000477 7.9e-07 57.4 54 50.0
unitig_52.g17108 Utricularia gibba HOM05D000633 ORTHO05D000477 7.9e-07 57.4 66 39.4
CDE05G3176 Ceratophyllum demersum HOM05D000633 ORTHO05D000477 1.0e-06 57.0 43 58.1
MELO3C022669.2 Cucumis melo HOM05D000633 ORTHO05D000477 1.0e-06 57.0 50 50.0
CsaV3_3G030720 Cucumis sativus L. HOM05D000633 ORTHO05D000477 1.0e-06 57.0 50 50.0
Dinv25548 Davidia involucrata HOM05D001055 ORTHO05D000867 1.0e-06 57.0 48 52.1
Lalb_Chr17g0343541 Lupinus albus HOM05D000633 ORTHO05D000477 1.0e-06 57.0 46 60.9
Peaxi162Scf00207g01421 Petunia axillaris HOM05D000633 ORTHO05D000477 1.0e-06 57.0 52 51.9
Lalb_Chr04g0253651 Lupinus albus HOM05D000633 ORTHO05D000477 1.3e-06 56.6 46 60.9
Nn8g38613 Nelumbo nucifera HOM05D000633 ORTHO05D000477 1.3e-06 56.6 44 56.8
Peaxi162Scf00038g00204 Petunia axillaris HOM05D000633 ORTHO05D000477 1.3e-06 56.6 52 51.9
Solyc06g062960.3 Solanum lycopersicum HOM05D000633 ORTHO05D000477 1.3e-06 56.6 57 43.9
Sopen06g022410 Solanum pennellii HOM05D000633 ORTHO05D000477 1.3e-06 56.6 57 43.9
Eucgr.F04401 Eucalyptus grandis HOM05D000633 ORTHO05D000477 1.8e-06 56.2 54 51.9
Atru.chr1.4040 Acer truncatum HOM05D000633 ORTHO05D000477 2.3e-06 55.8 41 63.4
Lsat_1_v5_gn_4_94381 Lactuca sativa HOM05D000633 ORTHO05D000477 2.3e-06 55.8 43 60.5
Medtr8g021190 Medicago truncatula HOM05D000633 ORTHO05D000477 2.3e-06 55.8 49 57.1
PGR119G1770 Punica granatum HOM05D000633 ORTHO05D000477 2.3e-06 55.8 43 60.5
Lalb_Chr10g0101431 Lupinus albus HOM05D000633 ORTHO05D000477 3.0e-06 55.5 46 60.9
PGSC0003DMG400004892 Solanum tuberosum HOM05D000633 ORTHO05D000477 3.0e-06 55.5 53 47.2
Glyma.16G009000 Glycine max HOM05D000633 ORTHO05D000477 3.9e-06 55.1 61 47.5
HanXRQChr09g0276801 Helianthus annuus HOM05D000633 ORTHO05D000477 3.9e-06 55.1 53 52.8
Lsat_1_v5_gn_1_38421 Lactuca sativa HOM05D000633 ORTHO05D000477 3.9e-06 55.1 42 61.9
GSVIVG01035488001 Vitis vinifera HOM05D000633 ORTHO05D000477 3.9e-06 55.1 39 59.0
CDE05G0408 Ceratophyllum demersum HOM05D000633 ORTHO05D000477 5.1e-06 54.7 61 41.0
Glyma.07G040400 Glycine max HOM05D000633 ORTHO05D000477 5.1e-06 54.7 46 60.9
Lj3g0021496 Lotus japonicus HOM05D000633 ORTHO05D000477 5.1e-06 54.7 46 58.7
TPR.G16735 Trifolium pratense HOM05D000633 ORTHO05D000477 5.1e-06 54.7 49 57.1
Aqoxy7G01025 Aquilegia oxysepala HOM05D000633 ORTHO05D000477 6.7e-06 54.3 40 60.0
EL10Ac7g16432 Beta vulgaris HOM05D000633 ORTHO05D000477 6.7e-06 54.3 44 56.8
CAN.G825.3 Capsicum annuum HOM05D000633 ORTHO05D000477 6.7e-06 54.3 57 42.1
Cpa.g.c43223 Carica papaya HOM05D000633 ORTHO05D000477 6.7e-06 54.3 46 56.5
Lsat_1_v5_gn_7_58100 Lactuca sativa HOM05D000633 ORTHO05D000477 6.7e-06 54.3 44 52.3
PSO135G0055 Papaver somniferum HOM05D000633 ORTHO05D000477 6.7e-06 54.3 46 50.0
Potri.001G166900 Populus trichocarpa HOM05D000633 ORTHO05D000477 6.7e-06 54.3 41 61.0
Ca_23397_v3 Cicer arietinum L. HOM05D000633 ORTHO05D000477 8.7e-06 53.9 46 56.5
Ciclev10009800m.g Citrus clementina HOM05D000633 ORTHO05D000477 8.7e-06 53.9 41 56.1
Lsat_1_v5_gn_5_134981 Lactuca sativa HOM05D000633 ORTHO05D000477 8.7e-06 53.9 48 52.1


User provided reference genes

Program Settings