Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold96G29076 Striga asiatica HOM05D003426 ORTHO05D003816 1.6e-236 822.4 411 100.0
SGA_v2.0_scaffold1435G53950 Striga asiatica HOM05D003426 ORTHO05D003816 2.1e-87 327.0 299 64.2
SGA_v2.0_scaffold12G06013 Striga asiatica HOM05D003426 ORTHO05D003816 1.7e-41 174.5 144 66.7
MSTRG.6152 Avicennia marina HOM05D003426 ORTHO05D003816 7.4e-21 105.9 339 28.9
Potri.006G182601 Populus trichocarpa HOM05D003426 ORTHO05D003816 1.0e-17 95.5 272 30.9
Cfa020810 Carpinus fangiana HOM05D003426 ORTHO05D003816 5.5e-16 89.7 271 30.3
Dinv42844 Davidia involucrata HOM05D003426 ORTHO05D003816 5.5e-16 89.7 130 40.8
Dinv43256 Davidia involucrata HOM05D003426 ORTHO05D003816 5.5e-16 89.7 130 40.8
Lj9C718T11 Lonicera japonica HOM05D003426 ORTHO05D003816 5.5e-16 89.7 255 30.6
MSTRG.26266 Avicennia marina HOM05D003426 ORTHO05D003816 9.4e-16 89.0 270 32.6
Solyc07g005700.3 Solanum lycopersicum HOM05D003426 ORTHO05D003816 1.6e-15 88.2 259 30.1
Sopen07g001810 Solanum pennellii HOM05D003426 ORTHO05D003816 2.1e-15 87.8 263 29.3
CAN.G160.49 Capsicum annuum HOM05D003426 ORTHO05D003816 6.1e-15 86.3 327 28.7
PGSC0003DMG400011187 Solanum tuberosum HOM05D003426 ORTHO05D003816 8.0e-15 85.9 287 28.9
Haze_19169 Corylus avellana HOM05D003426 ORTHO05D003816 1.8e-14 84.7 306 29.1
Oeu026460.1 Olea europaea HOM05D003426 ORTHO05D003816 4.0e-14 83.6 260 29.6
vmacro16795 Vaccinium macrocarpon HOM05D003426 ORTHO05D003816 3.3e-13 80.5 255 26.7
Hma1.2p1_0028F.1_g017630 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 5.7e-13 79.7 240 31.7
HanXRQChr05g0144001 Helianthus annuus HOM05D003426 ORTHO05D003816 1.7e-12 78.2 238 30.3
Actinidia23556 Actinidia chinensis HOM05D003426 ORTHO05D003816 4.8e-12 76.6 263 29.3
TAR636G1172 Trochodendron aralioides HOM05D003426 ORTHO05D003816 8.2e-12 75.9 255 25.9
AUR62025323 Chenopodium quinoa HOM05D003426 ORTHO05D003816 3.1e-11 73.9 231 28.6
TAR626G1511 Trochodendron aralioides HOM05D003426 ORTHO05D003816 3.1e-11 73.9 245 25.3
AUR62028339 Chenopodium quinoa HOM05D003426 ORTHO05D003816 9.1e-11 72.4 231 28.1
Cc06_g14810 Coffea canephora HOM05D003426 ORTHO05D003816 1.2e-10 72.0 242 28.9
CSS0024837 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D003816 1.6e-10 71.6 112 38.4
Hma1.2p1_2680F.1_g326790 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 2.7e-10 70.9 106 40.6
Nitab4.5_0005869g0080 Nicotiana tabacum HOM05D003426 ORTHO05D003816 3.5e-10 70.5 93 41.9
Rhsim01G0028100 Rhododendron simsii HOM05D003426 ORTHO05D003816 4.5e-10 70.1 128 35.2
Peaxi162Scf00401g00417 Petunia axillaris HOM05D003426 ORTHO05D003816 5.9e-10 69.7 258 26.4
EL10Ac2g02492 Beta vulgaris HOM05D016866 ORTHO05D003816 1.7e-09 68.2 229 29.7
Rhsim03G0257700 Rhododendron simsii HOM05D003426 ORTHO05D003816 2.2e-09 67.8 274 27.4
Actinidia38667 Actinidia chinensis HOM05D003426 ORTHO05D003816 5.0e-09 66.6 260 27.3
Nitab4.5_0001571g0080 Nicotiana tabacum HOM05D003426 ORTHO05D003816 5.0e-09 66.6 118 34.7
CiPaw.15G166800 Carya illinoinensis HOM05D003426 ORTHO05D003816 6.5e-09 66.2 120 33.3
Thecc.09G028500 Theobroma cacao HOM05D003426 ORTHO05D003816 6.5e-09 66.2 258 27.9
Cpa.g.sc46.169 Carica papaya HOM05D003426 ORTHO05D003816 1.5e-08 65.1 239 26.4
COL.COLO4_18823 Corchorus olitorius HOM05D003426 ORTHO05D003816 1.5e-08 65.1 247 27.1
SalBow1G0569 Salvia bowleyana HOM05D003426 ORTHO05D003816 1.5e-08 65.1 260 26.9
EL10Ac8g18943 Beta vulgaris HOM05D003426 ORTHO05D003816 4.2e-08 63.5 122 32.0
SGA_v2.0_scaffold265G46098 Striga asiatica HOM05D003426 ORTHO05D003816 7.2e-08 62.8 257 29.6
Actinidia10526 Actinidia chinensis HOM05D003426 ORTHO05D003816 9.4e-08 62.4 251 25.9
Lalb_Chr12g0198761 Lupinus albus HOM05D003426 ORTHO05D003816 1.2e-07 62.0 120 34.2
PSO111G0039 Papaver somniferum HOM05D003426 ORTHO05D003816 1.2e-07 62.0 147 29.3
PSO561G0041 Papaver somniferum HOM05D003426 ORTHO05D003816 1.2e-07 62.0 147 29.3
TWI34G0373 Tripterygium wilfordii HOM05D003426 ORTHO05D003816 1.2e-07 62.0 256 26.6
Atru.chr7.23 Acer truncatum HOM05D003426 ORTHO05D003816 1.6e-07 61.6 107 32.7
Lsat_1_v5_gn_8_63641 Lactuca sativa HOM05D003426 ORTHO05D003816 2.1e-07 61.2 231 26.4
AUR62024799 Chenopodium quinoa HOM05D016866 ORTHO05D003816 3.6e-07 60.5 263 26.6
Nn8g39953 Nelumbo nucifera HOM05D003426 ORTHO05D003816 4.7e-07 60.1 272 27.2
Aqoxy7G03377 Aquilegia oxysepala HOM05D003426 ORTHO05D003816 1.4e-06 58.5 228 25.9
Lj7P460T26 Lonicera japonica HOM05D003426 ORTHO05D003816 1.4e-06 58.5 87 33.3
Dinv08190 Davidia involucrata HOM05D003426 ORTHO05D003816 3.0e-06 57.4 230 27.0
Psat4g009680 Pisum sativum HOM05D003426 ORTHO05D003816 3.0e-06 57.4 86 33.7
Duzib168G0934 Durio zibethinus HOM05D003426 ORTHO05D003816 5.2e-06 56.6 100 36.0
MBI14_g30955_MAGBIO Magnolia biondii HOM05D003426 ORTHO05D003816 5.2e-06 56.6 86 33.7
MD15G1151400 Malus domestica HOM05D003426 ORTHO05D003816 5.2e-06 56.6 228 29.4
QL02p093542 Quercus lobata HOM05D001418 ORTHO05D002038 6.8e-06 56.2 79 36.7
PSO675G1450 Papaver somniferum HOM05D003426 ORTHO05D003816 8.8e-06 55.8 102 34.3


User provided reference genes

Program Settings